Variability and Genetic Structure in Populations of Arrabidaea bilabiata (Sprague) Sandwith in the Amazonas State

Detalhes bibliográficos
Autor(a) principal: Souza,L.S.A.
Data de Publicação: 2015
Outros Autores: Silva,J.F., Lopes,M.T.G., Bentes,J.L.S., Valente,M.S.F., Costa Neto,P.Q.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Planta daninha (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-83582015000200213
Resumo: Weeds in pastures can intoxicate animals, and Arrabidaea bilabiata is the most important species for herbivores in floodplain areas in the Amazon Basin. Genetic diversity studies in natural populations may contribute to the better understanding of the range of toxicity and the genetic variability organization in this species. The objective of this study was to assess the variability and genetic structure in six populations of A. bilabiata sampled in floodplain areas in three municipalities of the Amazonas State, from the AFLP markers analysis. AFLP markers were efficient to characterize the genetic variability of the 65 individuals analyzed. From four combinations of oligonucleotides, a total of 309 AFLP fragments was obtained, where 304 (98.38%) were polymorphic. By the dendrogram and Bayesian cluster analysis, there was a formation of two isolated groups, the first one comprising individuals from Autazes municipality and the second one comprising individuals from Itacoatiara and Parintins. However, depending on the method to define the most probable cluster number, there was a separation of the six populations, according to their geographical origin. Mantel test confirmed that geographically closer populations are more akin, although low gene flow (0.538) is observed among the sampled populations. The molecular analysis of variance found that 49.29% of the genetic variability are among individuals inside populations and 50.71% among the populations analyzed. The results indicate the possibility that isolated A. bilabiata populations contain plants with different toxicity levels and suggest a strong adaptability of the species.
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spelling Variability and Genetic Structure in Populations of Arrabidaea bilabiata (Sprague) Sandwith in the Amazonas StateArrabidaea bilabiatapasture weedspoisonous plantsAFLPgenetic diversityWeeds in pastures can intoxicate animals, and Arrabidaea bilabiata is the most important species for herbivores in floodplain areas in the Amazon Basin. Genetic diversity studies in natural populations may contribute to the better understanding of the range of toxicity and the genetic variability organization in this species. The objective of this study was to assess the variability and genetic structure in six populations of A. bilabiata sampled in floodplain areas in three municipalities of the Amazonas State, from the AFLP markers analysis. AFLP markers were efficient to characterize the genetic variability of the 65 individuals analyzed. From four combinations of oligonucleotides, a total of 309 AFLP fragments was obtained, where 304 (98.38%) were polymorphic. By the dendrogram and Bayesian cluster analysis, there was a formation of two isolated groups, the first one comprising individuals from Autazes municipality and the second one comprising individuals from Itacoatiara and Parintins. However, depending on the method to define the most probable cluster number, there was a separation of the six populations, according to their geographical origin. Mantel test confirmed that geographically closer populations are more akin, although low gene flow (0.538) is observed among the sampled populations. The molecular analysis of variance found that 49.29% of the genetic variability are among individuals inside populations and 50.71% among the populations analyzed. The results indicate the possibility that isolated A. bilabiata populations contain plants with different toxicity levels and suggest a strong adaptability of the species.Sociedade Brasileira da Ciência das Plantas Daninhas 2015-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-83582015000200213Planta Daninha v.33 n.2 2015reponame:Planta daninha (Online)instname:Sociedade Brasileira da Ciência das Plantas Daninhas (SBCPD)instacron:SBCPD10.1590/0100-83582015000200006info:eu-repo/semantics/openAccessSouza,L.S.A.Silva,J.F.Lopes,M.T.G.Bentes,J.L.S.Valente,M.S.F.Costa Neto,P.Q.eng2015-07-06T00:00:00Zoai:scielo:S0100-83582015000200213Revistahttp://revistas.cpd.ufv.br/pdaninhaweb/https://old.scielo.br/oai/scielo-oai.php||rpdaninha@gmail.com1806-96810100-8358opendoar:2015-07-06T00:00Planta daninha (Online) - Sociedade Brasileira da Ciência das Plantas Daninhas (SBCPD)false
dc.title.none.fl_str_mv Variability and Genetic Structure in Populations of Arrabidaea bilabiata (Sprague) Sandwith in the Amazonas State
title Variability and Genetic Structure in Populations of Arrabidaea bilabiata (Sprague) Sandwith in the Amazonas State
spellingShingle Variability and Genetic Structure in Populations of Arrabidaea bilabiata (Sprague) Sandwith in the Amazonas State
Souza,L.S.A.
Arrabidaea bilabiata
pasture weeds
poisonous plants
AFLP
genetic diversity
title_short Variability and Genetic Structure in Populations of Arrabidaea bilabiata (Sprague) Sandwith in the Amazonas State
title_full Variability and Genetic Structure in Populations of Arrabidaea bilabiata (Sprague) Sandwith in the Amazonas State
title_fullStr Variability and Genetic Structure in Populations of Arrabidaea bilabiata (Sprague) Sandwith in the Amazonas State
title_full_unstemmed Variability and Genetic Structure in Populations of Arrabidaea bilabiata (Sprague) Sandwith in the Amazonas State
title_sort Variability and Genetic Structure in Populations of Arrabidaea bilabiata (Sprague) Sandwith in the Amazonas State
author Souza,L.S.A.
author_facet Souza,L.S.A.
Silva,J.F.
Lopes,M.T.G.
Bentes,J.L.S.
Valente,M.S.F.
Costa Neto,P.Q.
author_role author
author2 Silva,J.F.
Lopes,M.T.G.
Bentes,J.L.S.
Valente,M.S.F.
Costa Neto,P.Q.
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Souza,L.S.A.
Silva,J.F.
Lopes,M.T.G.
Bentes,J.L.S.
Valente,M.S.F.
Costa Neto,P.Q.
dc.subject.por.fl_str_mv Arrabidaea bilabiata
pasture weeds
poisonous plants
AFLP
genetic diversity
topic Arrabidaea bilabiata
pasture weeds
poisonous plants
AFLP
genetic diversity
description Weeds in pastures can intoxicate animals, and Arrabidaea bilabiata is the most important species for herbivores in floodplain areas in the Amazon Basin. Genetic diversity studies in natural populations may contribute to the better understanding of the range of toxicity and the genetic variability organization in this species. The objective of this study was to assess the variability and genetic structure in six populations of A. bilabiata sampled in floodplain areas in three municipalities of the Amazonas State, from the AFLP markers analysis. AFLP markers were efficient to characterize the genetic variability of the 65 individuals analyzed. From four combinations of oligonucleotides, a total of 309 AFLP fragments was obtained, where 304 (98.38%) were polymorphic. By the dendrogram and Bayesian cluster analysis, there was a formation of two isolated groups, the first one comprising individuals from Autazes municipality and the second one comprising individuals from Itacoatiara and Parintins. However, depending on the method to define the most probable cluster number, there was a separation of the six populations, according to their geographical origin. Mantel test confirmed that geographically closer populations are more akin, although low gene flow (0.538) is observed among the sampled populations. The molecular analysis of variance found that 49.29% of the genetic variability are among individuals inside populations and 50.71% among the populations analyzed. The results indicate the possibility that isolated A. bilabiata populations contain plants with different toxicity levels and suggest a strong adaptability of the species.
publishDate 2015
dc.date.none.fl_str_mv 2015-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-83582015000200213
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0100-83582015000200006
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dc.publisher.none.fl_str_mv Sociedade Brasileira da Ciência das Plantas Daninhas
publisher.none.fl_str_mv Sociedade Brasileira da Ciência das Plantas Daninhas
dc.source.none.fl_str_mv Planta Daninha v.33 n.2 2015
reponame:Planta daninha (Online)
instname:Sociedade Brasileira da Ciência das Plantas Daninhas (SBCPD)
instacron:SBCPD
instname_str Sociedade Brasileira da Ciência das Plantas Daninhas (SBCPD)
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reponame_str Planta daninha (Online)
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repository.name.fl_str_mv Planta daninha (Online) - Sociedade Brasileira da Ciência das Plantas Daninhas (SBCPD)
repository.mail.fl_str_mv ||rpdaninha@gmail.com
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