A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil

Detalhes bibliográficos
Autor(a) principal: Silva,Elisângela Benedet
Data de Publicação: 2019
Outros Autores: Giasson,Élvio, Dotto,André Carnieletto, Caten,Alexandre ten, Demattê,José Alexandre Melo, Bacic,Ivan Luiz Zilli, Veiga,Milton da
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista Brasileira de Ciência do Solo (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832019000100304
Resumo: ABSTRACT The success of soil prediction by VIS-NIR-SWIR spectroscopy has led to considerable investment in large soil spectral libraries. The aims of this study were 1) to develop a soil VIS-NIR-SWIR spectroscopy approach using legacy soil samples to improve spectral soil information in a regional scale; (2) to compare six spectral preprocessing techniques; and (3) to compare the performance of linear and non-linear multivariate models for prediction of sand and clay content. A total of 1,534 legacy soil samples, stored by Epagri, were collected from agricultural areas in 2009 on a regional scale, covering 260 municipalities of Santa Catarina. Six spectral preprocessing techniques were applied and compared with reflectance spectra (control treatment) in the development of sand and clay prediction models. Five multivariate regression models, Support Vector Machines, Gaussian Process Regression, Cubist, Random Forest, and Partial Least Square Regression were compared. The scatter-corrective preprocessing groups produced similar or better performance than spectral-derivatives. In addition, preprocessing spectra prior to regression analysis does not improve sand prediction, since reflectance spectra achieved the best performance using Cubist, SVM, and PLS models. In general, clay content presented better prediction accuracy than sand content. The best multivariate model to predict sand and clay content from soil VIS-NIR-SWIR spectra was Cubist. The best Cubist performance was achieved combined with reflectance spectra (R2 = 0.73; root mean square error = 10.60 %; ratio of the performance to the interquartile range = 2.36) and MSC (R2 = 0.83; root mean square error = 7.29 %; ratio of the performance to the interquartile range = 3.70) for sand and clay content, respectively. Considering the mean RMSE values of the validation set, the predictive ability of the multivariate models decreased in the following order: Cubist>PLS>RF>GPR>SVM for both properties. The predictive ability of VIS-NIR-SWIR reflectance spectroscopy achieved in this study for sand and clay content using legacy soil data and heterogeneous samples confirmed the potential of the spectroscopy approach.
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spelling A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazilsoil spectral librarymultivariate modelspreprocessing techniquesSanta CatarinaABSTRACT The success of soil prediction by VIS-NIR-SWIR spectroscopy has led to considerable investment in large soil spectral libraries. The aims of this study were 1) to develop a soil VIS-NIR-SWIR spectroscopy approach using legacy soil samples to improve spectral soil information in a regional scale; (2) to compare six spectral preprocessing techniques; and (3) to compare the performance of linear and non-linear multivariate models for prediction of sand and clay content. A total of 1,534 legacy soil samples, stored by Epagri, were collected from agricultural areas in 2009 on a regional scale, covering 260 municipalities of Santa Catarina. Six spectral preprocessing techniques were applied and compared with reflectance spectra (control treatment) in the development of sand and clay prediction models. Five multivariate regression models, Support Vector Machines, Gaussian Process Regression, Cubist, Random Forest, and Partial Least Square Regression were compared. The scatter-corrective preprocessing groups produced similar or better performance than spectral-derivatives. In addition, preprocessing spectra prior to regression analysis does not improve sand prediction, since reflectance spectra achieved the best performance using Cubist, SVM, and PLS models. In general, clay content presented better prediction accuracy than sand content. The best multivariate model to predict sand and clay content from soil VIS-NIR-SWIR spectra was Cubist. The best Cubist performance was achieved combined with reflectance spectra (R2 = 0.73; root mean square error = 10.60 %; ratio of the performance to the interquartile range = 2.36) and MSC (R2 = 0.83; root mean square error = 7.29 %; ratio of the performance to the interquartile range = 3.70) for sand and clay content, respectively. Considering the mean RMSE values of the validation set, the predictive ability of the multivariate models decreased in the following order: Cubist>PLS>RF>GPR>SVM for both properties. The predictive ability of VIS-NIR-SWIR reflectance spectroscopy achieved in this study for sand and clay content using legacy soil data and heterogeneous samples confirmed the potential of the spectroscopy approach.Sociedade Brasileira de Ciência do Solo2019-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832019000100304Revista Brasileira de Ciência do Solo v.43 2019reponame:Revista Brasileira de Ciência do Solo (Online)instname:Sociedade Brasileira de Ciência do Solo (SBCS)instacron:SBCS10.1590/18069657rbcs20180174info:eu-repo/semantics/openAccessSilva,Elisângela BenedetGiasson,ÉlvioDotto,André CarnielettoCaten,Alexandre tenDemattê,José Alexandre MeloBacic,Ivan Luiz ZilliVeiga,Milton daeng2019-08-13T00:00:00Zoai:scielo:S0100-06832019000100304Revistahttp://www.scielo.br/scielo.php?script=sci_serial&pid=0100-0683&lng=es&nrm=isohttps://old.scielo.br/oai/scielo-oai.php||sbcs@ufv.br1806-96570100-0683opendoar:2019-08-13T00:00Revista Brasileira de Ciência do Solo (Online) - Sociedade Brasileira de Ciência do Solo (SBCS)false
dc.title.none.fl_str_mv A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
title A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
spellingShingle A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
Silva,Elisângela Benedet
soil spectral library
multivariate models
preprocessing techniques
Santa Catarina
title_short A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
title_full A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
title_fullStr A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
title_full_unstemmed A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
title_sort A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
author Silva,Elisângela Benedet
author_facet Silva,Elisângela Benedet
Giasson,Élvio
Dotto,André Carnieletto
Caten,Alexandre ten
Demattê,José Alexandre Melo
Bacic,Ivan Luiz Zilli
Veiga,Milton da
author_role author
author2 Giasson,Élvio
Dotto,André Carnieletto
Caten,Alexandre ten
Demattê,José Alexandre Melo
Bacic,Ivan Luiz Zilli
Veiga,Milton da
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Silva,Elisângela Benedet
Giasson,Élvio
Dotto,André Carnieletto
Caten,Alexandre ten
Demattê,José Alexandre Melo
Bacic,Ivan Luiz Zilli
Veiga,Milton da
dc.subject.por.fl_str_mv soil spectral library
multivariate models
preprocessing techniques
Santa Catarina
topic soil spectral library
multivariate models
preprocessing techniques
Santa Catarina
description ABSTRACT The success of soil prediction by VIS-NIR-SWIR spectroscopy has led to considerable investment in large soil spectral libraries. The aims of this study were 1) to develop a soil VIS-NIR-SWIR spectroscopy approach using legacy soil samples to improve spectral soil information in a regional scale; (2) to compare six spectral preprocessing techniques; and (3) to compare the performance of linear and non-linear multivariate models for prediction of sand and clay content. A total of 1,534 legacy soil samples, stored by Epagri, were collected from agricultural areas in 2009 on a regional scale, covering 260 municipalities of Santa Catarina. Six spectral preprocessing techniques were applied and compared with reflectance spectra (control treatment) in the development of sand and clay prediction models. Five multivariate regression models, Support Vector Machines, Gaussian Process Regression, Cubist, Random Forest, and Partial Least Square Regression were compared. The scatter-corrective preprocessing groups produced similar or better performance than spectral-derivatives. In addition, preprocessing spectra prior to regression analysis does not improve sand prediction, since reflectance spectra achieved the best performance using Cubist, SVM, and PLS models. In general, clay content presented better prediction accuracy than sand content. The best multivariate model to predict sand and clay content from soil VIS-NIR-SWIR spectra was Cubist. The best Cubist performance was achieved combined with reflectance spectra (R2 = 0.73; root mean square error = 10.60 %; ratio of the performance to the interquartile range = 2.36) and MSC (R2 = 0.83; root mean square error = 7.29 %; ratio of the performance to the interquartile range = 3.70) for sand and clay content, respectively. Considering the mean RMSE values of the validation set, the predictive ability of the multivariate models decreased in the following order: Cubist>PLS>RF>GPR>SVM for both properties. The predictive ability of VIS-NIR-SWIR reflectance spectroscopy achieved in this study for sand and clay content using legacy soil data and heterogeneous samples confirmed the potential of the spectroscopy approach.
publishDate 2019
dc.date.none.fl_str_mv 2019-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832019000100304
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832019000100304
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/18069657rbcs20180174
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Ciência do Solo
publisher.none.fl_str_mv Sociedade Brasileira de Ciência do Solo
dc.source.none.fl_str_mv Revista Brasileira de Ciência do Solo v.43 2019
reponame:Revista Brasileira de Ciência do Solo (Online)
instname:Sociedade Brasileira de Ciência do Solo (SBCS)
instacron:SBCS
instname_str Sociedade Brasileira de Ciência do Solo (SBCS)
instacron_str SBCS
institution SBCS
reponame_str Revista Brasileira de Ciência do Solo (Online)
collection Revista Brasileira de Ciência do Solo (Online)
repository.name.fl_str_mv Revista Brasileira de Ciência do Solo (Online) - Sociedade Brasileira de Ciência do Solo (SBCS)
repository.mail.fl_str_mv ||sbcs@ufv.br
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