Clinical prognosis and gene expression profiles of prostate cancer patients with bone and lymphatic metastases
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Food Science and Technology (Campinas) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0101-20612022000102029 |
Resumo: | Abstract In this paper, we aimed to observe the prognosis and gene expression profiles of bone and lymphatic metastases. SEER*Stat software was used to collect prognosis analysis. Datasets of gene expression profiles were downloaded from the GEO database. GEO2R tool was used to analyze the data to identify the differentially expressed genes (DEGs). Functions of DEGs were annotated by KEGG. Protein interaction analysis and hub gene selection were performed using STRING database. The overall survival rate (OS) of Lymph node metastasis was better than that of bone metastases. In lymph node metastasis prostate cancer, the expression of ZWINT, DNMT3B and RAD54B was higher than that in bone metastasis prostate cancer; the expression of HBA2, MS4A4A, COLCE, CCL18, DCN, S100A4, ACP5, ARHGDIA, MEM204, GALR3, CTSZ, and EPHX1 was lower than that in bone metastasis prostate cancer. DEGs in bone metastasis prostate cancer were involved in various biological processes, such us enhancing the adhesion and chemotaxis, immune correlation and promoting malignant transformation of cancer cells. The data suggests that gene expression patterns of these two profiles are different. Bone metastasis may be poor prognosis and higher malignancy. |
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Clinical prognosis and gene expression profiles of prostate cancer patients with bone and lymphatic metastasesbone metastasisprostate cancerlymphatic metastasisgene expression profilesAbstract In this paper, we aimed to observe the prognosis and gene expression profiles of bone and lymphatic metastases. SEER*Stat software was used to collect prognosis analysis. Datasets of gene expression profiles were downloaded from the GEO database. GEO2R tool was used to analyze the data to identify the differentially expressed genes (DEGs). Functions of DEGs were annotated by KEGG. Protein interaction analysis and hub gene selection were performed using STRING database. The overall survival rate (OS) of Lymph node metastasis was better than that of bone metastases. In lymph node metastasis prostate cancer, the expression of ZWINT, DNMT3B and RAD54B was higher than that in bone metastasis prostate cancer; the expression of HBA2, MS4A4A, COLCE, CCL18, DCN, S100A4, ACP5, ARHGDIA, MEM204, GALR3, CTSZ, and EPHX1 was lower than that in bone metastasis prostate cancer. DEGs in bone metastasis prostate cancer were involved in various biological processes, such us enhancing the adhesion and chemotaxis, immune correlation and promoting malignant transformation of cancer cells. The data suggests that gene expression patterns of these two profiles are different. Bone metastasis may be poor prognosis and higher malignancy.Sociedade Brasileira de Ciência e Tecnologia de Alimentos2022-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0101-20612022000102029Food Science and Technology v.42 2022reponame:Food Science and Technology (Campinas)instname:Sociedade Brasileira de Ciência e Tecnologia de Alimentos (SBCTA)instacron:SBCTA10.1590/fst.57221info:eu-repo/semantics/openAccessLI,JianfengHU,ShaoyuLI,HuafuJIANG,JieWANG,Jianjuneng2022-02-22T00:00:00Zoai:scielo:S0101-20612022000102029Revistahttp://www.scielo.br/ctaONGhttps://old.scielo.br/oai/scielo-oai.php||revista@sbcta.org.br1678-457X0101-2061opendoar:2022-02-22T00:00Food Science and Technology (Campinas) - Sociedade Brasileira de Ciência e Tecnologia de Alimentos (SBCTA)false |
dc.title.none.fl_str_mv |
Clinical prognosis and gene expression profiles of prostate cancer patients with bone and lymphatic metastases |
title |
Clinical prognosis and gene expression profiles of prostate cancer patients with bone and lymphatic metastases |
spellingShingle |
Clinical prognosis and gene expression profiles of prostate cancer patients with bone and lymphatic metastases LI,Jianfeng bone metastasis prostate cancer lymphatic metastasis gene expression profiles |
title_short |
Clinical prognosis and gene expression profiles of prostate cancer patients with bone and lymphatic metastases |
title_full |
Clinical prognosis and gene expression profiles of prostate cancer patients with bone and lymphatic metastases |
title_fullStr |
Clinical prognosis and gene expression profiles of prostate cancer patients with bone and lymphatic metastases |
title_full_unstemmed |
Clinical prognosis and gene expression profiles of prostate cancer patients with bone and lymphatic metastases |
title_sort |
Clinical prognosis and gene expression profiles of prostate cancer patients with bone and lymphatic metastases |
author |
LI,Jianfeng |
author_facet |
LI,Jianfeng HU,Shaoyu LI,Huafu JIANG,Jie WANG,Jianjun |
author_role |
author |
author2 |
HU,Shaoyu LI,Huafu JIANG,Jie WANG,Jianjun |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
LI,Jianfeng HU,Shaoyu LI,Huafu JIANG,Jie WANG,Jianjun |
dc.subject.por.fl_str_mv |
bone metastasis prostate cancer lymphatic metastasis gene expression profiles |
topic |
bone metastasis prostate cancer lymphatic metastasis gene expression profiles |
description |
Abstract In this paper, we aimed to observe the prognosis and gene expression profiles of bone and lymphatic metastases. SEER*Stat software was used to collect prognosis analysis. Datasets of gene expression profiles were downloaded from the GEO database. GEO2R tool was used to analyze the data to identify the differentially expressed genes (DEGs). Functions of DEGs were annotated by KEGG. Protein interaction analysis and hub gene selection were performed using STRING database. The overall survival rate (OS) of Lymph node metastasis was better than that of bone metastases. In lymph node metastasis prostate cancer, the expression of ZWINT, DNMT3B and RAD54B was higher than that in bone metastasis prostate cancer; the expression of HBA2, MS4A4A, COLCE, CCL18, DCN, S100A4, ACP5, ARHGDIA, MEM204, GALR3, CTSZ, and EPHX1 was lower than that in bone metastasis prostate cancer. DEGs in bone metastasis prostate cancer were involved in various biological processes, such us enhancing the adhesion and chemotaxis, immune correlation and promoting malignant transformation of cancer cells. The data suggests that gene expression patterns of these two profiles are different. Bone metastasis may be poor prognosis and higher malignancy. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0101-20612022000102029 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0101-20612022000102029 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/fst.57221 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Ciência e Tecnologia de Alimentos |
publisher.none.fl_str_mv |
Sociedade Brasileira de Ciência e Tecnologia de Alimentos |
dc.source.none.fl_str_mv |
Food Science and Technology v.42 2022 reponame:Food Science and Technology (Campinas) instname:Sociedade Brasileira de Ciência e Tecnologia de Alimentos (SBCTA) instacron:SBCTA |
instname_str |
Sociedade Brasileira de Ciência e Tecnologia de Alimentos (SBCTA) |
instacron_str |
SBCTA |
institution |
SBCTA |
reponame_str |
Food Science and Technology (Campinas) |
collection |
Food Science and Technology (Campinas) |
repository.name.fl_str_mv |
Food Science and Technology (Campinas) - Sociedade Brasileira de Ciência e Tecnologia de Alimentos (SBCTA) |
repository.mail.fl_str_mv |
||revista@sbcta.org.br |
_version_ |
1752126335947374592 |