Integrating Brazilian health information systems in order to support the building of data warehouses

Detalhes bibliográficos
Autor(a) principal: Freire,Sergio Miranda
Data de Publicação: 2015
Outros Autores: Souza,Rômulo Cristovão de, Almeida,Rosimary Terezinha de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Research on Biomedical Engineering (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2446-47402015000300196
Resumo: AbstractIntroductionThis paper's aim is to develop a data warehouse from the integration of the files of three Brazilian health information systems concerned with the production of ambulatory and hospital procedures for cancer care, and cancer mortality. These systems do not have a unique patient identification, which makes their integration difficult even within a single system.MethodsData from the Brazilian Public Hospital Information System (SIH-SUS), the Oncology Module for the Outpatient Information System (APAC-ONCO) and the Mortality Information System (SIM) for the State of Rio de Janeiro, in the period from January 2000 to December 2004 were used. Each of the systems has the monthly data production compiled in dbase files (dbf). All the files pertaining to the same system were then read into a corresponding table in a MySQL Server 5.1. The SIH-SUS and APAC-ONCO tables were linked internally and with one another through record linkage methods. The APAC-ONCO table was linked to the SIM table. Afterwards a data warehouse was built using Pentaho and the MySQL database management system.ResultsThe sensitivities and specificities of the linkage processes were above 95% and close to 100% respectively. The data warehouse provided several analytical views that are accessed through the Pentaho Schema Workbench.ConclusionThis study presented a proposal for the integration of Brazilian Health Systems to support the building of data warehouses and provide information beyond those currently available with the individual systems.
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spelling Integrating Brazilian health information systems in order to support the building of data warehousesRecord linkageHealth information systemsDatabase integrationData warehouseNeoplasmsAbstractIntroductionThis paper's aim is to develop a data warehouse from the integration of the files of three Brazilian health information systems concerned with the production of ambulatory and hospital procedures for cancer care, and cancer mortality. These systems do not have a unique patient identification, which makes their integration difficult even within a single system.MethodsData from the Brazilian Public Hospital Information System (SIH-SUS), the Oncology Module for the Outpatient Information System (APAC-ONCO) and the Mortality Information System (SIM) for the State of Rio de Janeiro, in the period from January 2000 to December 2004 were used. Each of the systems has the monthly data production compiled in dbase files (dbf). All the files pertaining to the same system were then read into a corresponding table in a MySQL Server 5.1. The SIH-SUS and APAC-ONCO tables were linked internally and with one another through record linkage methods. The APAC-ONCO table was linked to the SIM table. Afterwards a data warehouse was built using Pentaho and the MySQL database management system.ResultsThe sensitivities and specificities of the linkage processes were above 95% and close to 100% respectively. The data warehouse provided several analytical views that are accessed through the Pentaho Schema Workbench.ConclusionThis study presented a proposal for the integration of Brazilian Health Systems to support the building of data warehouses and provide information beyond those currently available with the individual systems.Sociedade Brasileira de Engenharia Biomédica2015-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S2446-47402015000300196Research on Biomedical Engineering v.31 n.3 2015reponame:Research on Biomedical Engineering (Online)instname:Sociedade Brasileira de Engenharia Biomédica (SBEB)instacron:SBEB10.1590/2446-4740.0666info:eu-repo/semantics/openAccessFreire,Sergio MirandaSouza,Rômulo Cristovão deAlmeida,Rosimary Terezinha deeng2015-10-20T00:00:00Zoai:scielo:S2446-47402015000300196Revistahttp://www.rbejournal.org/https://old.scielo.br/oai/scielo-oai.php||rbe@rbejournal.org2446-47402446-4732opendoar:2015-10-20T00:00Research on Biomedical Engineering (Online) - Sociedade Brasileira de Engenharia Biomédica (SBEB)false
dc.title.none.fl_str_mv Integrating Brazilian health information systems in order to support the building of data warehouses
title Integrating Brazilian health information systems in order to support the building of data warehouses
spellingShingle Integrating Brazilian health information systems in order to support the building of data warehouses
Freire,Sergio Miranda
Record linkage
Health information systems
Database integration
Data warehouse
Neoplasms
title_short Integrating Brazilian health information systems in order to support the building of data warehouses
title_full Integrating Brazilian health information systems in order to support the building of data warehouses
title_fullStr Integrating Brazilian health information systems in order to support the building of data warehouses
title_full_unstemmed Integrating Brazilian health information systems in order to support the building of data warehouses
title_sort Integrating Brazilian health information systems in order to support the building of data warehouses
author Freire,Sergio Miranda
author_facet Freire,Sergio Miranda
Souza,Rômulo Cristovão de
Almeida,Rosimary Terezinha de
author_role author
author2 Souza,Rômulo Cristovão de
Almeida,Rosimary Terezinha de
author2_role author
author
dc.contributor.author.fl_str_mv Freire,Sergio Miranda
Souza,Rômulo Cristovão de
Almeida,Rosimary Terezinha de
dc.subject.por.fl_str_mv Record linkage
Health information systems
Database integration
Data warehouse
Neoplasms
topic Record linkage
Health information systems
Database integration
Data warehouse
Neoplasms
description AbstractIntroductionThis paper's aim is to develop a data warehouse from the integration of the files of three Brazilian health information systems concerned with the production of ambulatory and hospital procedures for cancer care, and cancer mortality. These systems do not have a unique patient identification, which makes their integration difficult even within a single system.MethodsData from the Brazilian Public Hospital Information System (SIH-SUS), the Oncology Module for the Outpatient Information System (APAC-ONCO) and the Mortality Information System (SIM) for the State of Rio de Janeiro, in the period from January 2000 to December 2004 were used. Each of the systems has the monthly data production compiled in dbase files (dbf). All the files pertaining to the same system were then read into a corresponding table in a MySQL Server 5.1. The SIH-SUS and APAC-ONCO tables were linked internally and with one another through record linkage methods. The APAC-ONCO table was linked to the SIM table. Afterwards a data warehouse was built using Pentaho and the MySQL database management system.ResultsThe sensitivities and specificities of the linkage processes were above 95% and close to 100% respectively. The data warehouse provided several analytical views that are accessed through the Pentaho Schema Workbench.ConclusionThis study presented a proposal for the integration of Brazilian Health Systems to support the building of data warehouses and provide information beyond those currently available with the individual systems.
publishDate 2015
dc.date.none.fl_str_mv 2015-09-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2446-47402015000300196
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2446-47402015000300196
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/2446-4740.0666
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Engenharia Biomédica
publisher.none.fl_str_mv Sociedade Brasileira de Engenharia Biomédica
dc.source.none.fl_str_mv Research on Biomedical Engineering v.31 n.3 2015
reponame:Research on Biomedical Engineering (Online)
instname:Sociedade Brasileira de Engenharia Biomédica (SBEB)
instacron:SBEB
instname_str Sociedade Brasileira de Engenharia Biomédica (SBEB)
instacron_str SBEB
institution SBEB
reponame_str Research on Biomedical Engineering (Online)
collection Research on Biomedical Engineering (Online)
repository.name.fl_str_mv Research on Biomedical Engineering (Online) - Sociedade Brasileira de Engenharia Biomédica (SBEB)
repository.mail.fl_str_mv ||rbe@rbejournal.org
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