Genetic diversity studies of Papaya meleira virus

Detalhes bibliográficos
Autor(a) principal: Daltro,Cleidiane B.
Data de Publicação: 2014
Outros Autores: Abreu,Emanuel Felipe Medeiros, Aragão,Francisco Jose Lima, Andrade,Eduardo C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Tropical plant pathology (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1982-56762014000100013
Resumo: Papaya (Carica papaya) is a fruit crop of great economic and social importance for Brazil and other papaya-producing countries. Brazil is the second largest producer in the world. The papaya sticky disease, caused by Papaya meleira virus (PMeV), has caused great losses in the major Brazilian papaya-producing states. In order to estimate the genetic diversity of PMeV, latex samples were collected from papaya plants in the states of Bahia, Espírito Santo, Pernambuco, Ceará and Rio Grande do Norte, and total RNA was extracted. Specific primer for the replicase region allowed the amplification, by RT-PCR, of a fragment of approximately 560 bp from 31 isolates. The sequence analysis indicated a level of conservation greater than 88% among isolates. Furthermore, comparative analyzes indicated that PMeV has similarity with mycoviruses of the family Totiviridae. This phylogenetic relationship was reinforced by the presence of conserved motifs within in the RdRp regions from mycoviruses.
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spelling Genetic diversity studies of Papaya meleira virusCarica papayaTotiviridaesticky diseasevariabilityvirusesPapaya (Carica papaya) is a fruit crop of great economic and social importance for Brazil and other papaya-producing countries. Brazil is the second largest producer in the world. The papaya sticky disease, caused by Papaya meleira virus (PMeV), has caused great losses in the major Brazilian papaya-producing states. In order to estimate the genetic diversity of PMeV, latex samples were collected from papaya plants in the states of Bahia, Espírito Santo, Pernambuco, Ceará and Rio Grande do Norte, and total RNA was extracted. Specific primer for the replicase region allowed the amplification, by RT-PCR, of a fragment of approximately 560 bp from 31 isolates. The sequence analysis indicated a level of conservation greater than 88% among isolates. Furthermore, comparative analyzes indicated that PMeV has similarity with mycoviruses of the family Totiviridae. This phylogenetic relationship was reinforced by the presence of conserved motifs within in the RdRp regions from mycoviruses.Sociedade Brasileira de Fitopatologia2014-02-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1982-56762014000100013Tropical Plant Pathology v.39 n.1 2014reponame:Tropical plant pathology (Online)instname:Sociedade Brasileira de Fitopatologiainstacron:SBF10.1590/S1982-56762014000100013info:eu-repo/semantics/openAccessDaltro,Cleidiane B.Abreu,Emanuel Felipe MedeirosAragão,Francisco Jose LimaAndrade,Eduardo C.eng2014-02-18T00:00:00Zoai:scielo:S1982-56762014000100013Revistahttps://www.scielo.br/j/tpp/ONGhttps://old.scielo.br/oai/scielo-oai.phpsbf-revista@ufla.br1983-20521982-5676opendoar:2014-02-18T00:00Tropical plant pathology (Online) - Sociedade Brasileira de Fitopatologiafalse
dc.title.none.fl_str_mv Genetic diversity studies of Papaya meleira virus
title Genetic diversity studies of Papaya meleira virus
spellingShingle Genetic diversity studies of Papaya meleira virus
Daltro,Cleidiane B.
Carica papaya
Totiviridae
sticky disease
variability
viruses
title_short Genetic diversity studies of Papaya meleira virus
title_full Genetic diversity studies of Papaya meleira virus
title_fullStr Genetic diversity studies of Papaya meleira virus
title_full_unstemmed Genetic diversity studies of Papaya meleira virus
title_sort Genetic diversity studies of Papaya meleira virus
author Daltro,Cleidiane B.
author_facet Daltro,Cleidiane B.
Abreu,Emanuel Felipe Medeiros
Aragão,Francisco Jose Lima
Andrade,Eduardo C.
author_role author
author2 Abreu,Emanuel Felipe Medeiros
Aragão,Francisco Jose Lima
Andrade,Eduardo C.
author2_role author
author
author
dc.contributor.author.fl_str_mv Daltro,Cleidiane B.
Abreu,Emanuel Felipe Medeiros
Aragão,Francisco Jose Lima
Andrade,Eduardo C.
dc.subject.por.fl_str_mv Carica papaya
Totiviridae
sticky disease
variability
viruses
topic Carica papaya
Totiviridae
sticky disease
variability
viruses
description Papaya (Carica papaya) is a fruit crop of great economic and social importance for Brazil and other papaya-producing countries. Brazil is the second largest producer in the world. The papaya sticky disease, caused by Papaya meleira virus (PMeV), has caused great losses in the major Brazilian papaya-producing states. In order to estimate the genetic diversity of PMeV, latex samples were collected from papaya plants in the states of Bahia, Espírito Santo, Pernambuco, Ceará and Rio Grande do Norte, and total RNA was extracted. Specific primer for the replicase region allowed the amplification, by RT-PCR, of a fragment of approximately 560 bp from 31 isolates. The sequence analysis indicated a level of conservation greater than 88% among isolates. Furthermore, comparative analyzes indicated that PMeV has similarity with mycoviruses of the family Totiviridae. This phylogenetic relationship was reinforced by the presence of conserved motifs within in the RdRp regions from mycoviruses.
publishDate 2014
dc.date.none.fl_str_mv 2014-02-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1982-56762014000100013
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1982-56762014000100013
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1982-56762014000100013
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Fitopatologia
publisher.none.fl_str_mv Sociedade Brasileira de Fitopatologia
dc.source.none.fl_str_mv Tropical Plant Pathology v.39 n.1 2014
reponame:Tropical plant pathology (Online)
instname:Sociedade Brasileira de Fitopatologia
instacron:SBF
instname_str Sociedade Brasileira de Fitopatologia
instacron_str SBF
institution SBF
reponame_str Tropical plant pathology (Online)
collection Tropical plant pathology (Online)
repository.name.fl_str_mv Tropical plant pathology (Online) - Sociedade Brasileira de Fitopatologia
repository.mail.fl_str_mv sbf-revista@ufla.br
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