Identification of Plastrum Testudinis used in traditional medicine with DNA mini-barcodes

Detalhes bibliográficos
Autor(a) principal: Chen,Mingyang
Data de Publicação: 2018
Outros Autores: Han,Xuan, Ma,Jiao, Liu,Xinyan, Li,Meng, Lv,Xiaona, Lu,Haisheng, Ren,Guangxi, Liu,Chunsheng
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista Brasileira de Farmacognosia (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0102-695X2018000300267
Resumo: ABSTRACT The carapace of the tortoise Chinemys reevesii is an ingredient of “Guijia”, a traditional Chinese medicine. However, C. reevesii is difficult to raise in aquaculture and is rare in the wild. Counterfeit tablets are made from carapaces of other species. In addition to C. reevesii, other species including Mauremys sinensis, Indotestudo elongate and Trachemys scripta have been used in Plastrum Testudinis as well. After processing, these carapaces are difficult to identify on the basis of morphological characteristics, which impedes law enforcement. Our study used DNA barcoding technology to identify C. reevesii and its substitutes. We extracted concentrated genomic DNA for PCR amplification. Based on the analysis of 61 full-length COI sequences, we designed four pairs of mini-barcode primers: Tu-A, Tu-B, Tu-C and Tu-D. The Tu-B primers sequenced genomic DNA with a success rate of 76.47%, and the Tu-D primers sequenced genomic DNA with a success rate of 88.24%. The identification efficiency of these two mini-barcodes was 70.59% and 64.71%, and the overall identification efficiency was approximately 76.47%. Similarly, a set of mini barcode systems was generated, which may provide an effective and low-cost method for the identification of authentic tortoise shells.
id SBFGNOSIA-1_d8cb4f0b0f964ce28bf944a6c20dcdc4
oai_identifier_str oai:scielo:S0102-695X2018000300267
network_acronym_str SBFGNOSIA-1
network_name_str Revista Brasileira de Farmacognosia (Online)
repository_id_str
spelling Identification of Plastrum Testudinis used in traditional medicine with DNA mini-barcodesPlastrum TestudinisChinemys reevesiiCOIDNA mini-barcodesABSTRACT The carapace of the tortoise Chinemys reevesii is an ingredient of “Guijia”, a traditional Chinese medicine. However, C. reevesii is difficult to raise in aquaculture and is rare in the wild. Counterfeit tablets are made from carapaces of other species. In addition to C. reevesii, other species including Mauremys sinensis, Indotestudo elongate and Trachemys scripta have been used in Plastrum Testudinis as well. After processing, these carapaces are difficult to identify on the basis of morphological characteristics, which impedes law enforcement. Our study used DNA barcoding technology to identify C. reevesii and its substitutes. We extracted concentrated genomic DNA for PCR amplification. Based on the analysis of 61 full-length COI sequences, we designed four pairs of mini-barcode primers: Tu-A, Tu-B, Tu-C and Tu-D. The Tu-B primers sequenced genomic DNA with a success rate of 76.47%, and the Tu-D primers sequenced genomic DNA with a success rate of 88.24%. The identification efficiency of these two mini-barcodes was 70.59% and 64.71%, and the overall identification efficiency was approximately 76.47%. Similarly, a set of mini barcode systems was generated, which may provide an effective and low-cost method for the identification of authentic tortoise shells.Sociedade Brasileira de Farmacognosia2018-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0102-695X2018000300267Revista Brasileira de Farmacognosia v.28 n.3 2018reponame:Revista Brasileira de Farmacognosia (Online)instname:Sociedade Brasileira de Farmacognosia (SBFgnosia)instacron:SBFGNOSIA10.1016/j.bjp.2018.04.008info:eu-repo/semantics/openAccessChen,MingyangHan,XuanMa,JiaoLiu,XinyanLi,MengLv,XiaonaLu,HaishengRen,GuangxiLiu,Chunshengeng2018-07-03T00:00:00Zoai:scielo:S0102-695X2018000300267Revistahttp://www.sbfgnosia.org.br/revista/https://old.scielo.br/oai/scielo-oai.phprbgnosia@ltf.ufpb.br1981-528X0102-695Xopendoar:2018-07-03T00:00Revista Brasileira de Farmacognosia (Online) - Sociedade Brasileira de Farmacognosia (SBFgnosia)false
dc.title.none.fl_str_mv Identification of Plastrum Testudinis used in traditional medicine with DNA mini-barcodes
title Identification of Plastrum Testudinis used in traditional medicine with DNA mini-barcodes
spellingShingle Identification of Plastrum Testudinis used in traditional medicine with DNA mini-barcodes
Chen,Mingyang
Plastrum Testudinis
Chinemys reevesii
COI
DNA mini-barcodes
title_short Identification of Plastrum Testudinis used in traditional medicine with DNA mini-barcodes
title_full Identification of Plastrum Testudinis used in traditional medicine with DNA mini-barcodes
title_fullStr Identification of Plastrum Testudinis used in traditional medicine with DNA mini-barcodes
title_full_unstemmed Identification of Plastrum Testudinis used in traditional medicine with DNA mini-barcodes
title_sort Identification of Plastrum Testudinis used in traditional medicine with DNA mini-barcodes
author Chen,Mingyang
author_facet Chen,Mingyang
Han,Xuan
Ma,Jiao
Liu,Xinyan
Li,Meng
Lv,Xiaona
Lu,Haisheng
Ren,Guangxi
Liu,Chunsheng
author_role author
author2 Han,Xuan
Ma,Jiao
Liu,Xinyan
Li,Meng
Lv,Xiaona
Lu,Haisheng
Ren,Guangxi
Liu,Chunsheng
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Chen,Mingyang
Han,Xuan
Ma,Jiao
Liu,Xinyan
Li,Meng
Lv,Xiaona
Lu,Haisheng
Ren,Guangxi
Liu,Chunsheng
dc.subject.por.fl_str_mv Plastrum Testudinis
Chinemys reevesii
COI
DNA mini-barcodes
topic Plastrum Testudinis
Chinemys reevesii
COI
DNA mini-barcodes
description ABSTRACT The carapace of the tortoise Chinemys reevesii is an ingredient of “Guijia”, a traditional Chinese medicine. However, C. reevesii is difficult to raise in aquaculture and is rare in the wild. Counterfeit tablets are made from carapaces of other species. In addition to C. reevesii, other species including Mauremys sinensis, Indotestudo elongate and Trachemys scripta have been used in Plastrum Testudinis as well. After processing, these carapaces are difficult to identify on the basis of morphological characteristics, which impedes law enforcement. Our study used DNA barcoding technology to identify C. reevesii and its substitutes. We extracted concentrated genomic DNA for PCR amplification. Based on the analysis of 61 full-length COI sequences, we designed four pairs of mini-barcode primers: Tu-A, Tu-B, Tu-C and Tu-D. The Tu-B primers sequenced genomic DNA with a success rate of 76.47%, and the Tu-D primers sequenced genomic DNA with a success rate of 88.24%. The identification efficiency of these two mini-barcodes was 70.59% and 64.71%, and the overall identification efficiency was approximately 76.47%. Similarly, a set of mini barcode systems was generated, which may provide an effective and low-cost method for the identification of authentic tortoise shells.
publishDate 2018
dc.date.none.fl_str_mv 2018-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0102-695X2018000300267
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0102-695X2018000300267
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1016/j.bjp.2018.04.008
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Farmacognosia
publisher.none.fl_str_mv Sociedade Brasileira de Farmacognosia
dc.source.none.fl_str_mv Revista Brasileira de Farmacognosia v.28 n.3 2018
reponame:Revista Brasileira de Farmacognosia (Online)
instname:Sociedade Brasileira de Farmacognosia (SBFgnosia)
instacron:SBFGNOSIA
instname_str Sociedade Brasileira de Farmacognosia (SBFgnosia)
instacron_str SBFGNOSIA
institution SBFGNOSIA
reponame_str Revista Brasileira de Farmacognosia (Online)
collection Revista Brasileira de Farmacognosia (Online)
repository.name.fl_str_mv Revista Brasileira de Farmacognosia (Online) - Sociedade Brasileira de Farmacognosia (SBFgnosia)
repository.mail.fl_str_mv rbgnosia@ltf.ufpb.br
_version_ 1752122470666600448