Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula

Detalhes bibliográficos
Autor(a) principal: Soares-Cavalcanti,Nina M.
Data de Publicação: 2012
Outros Autores: Belarmino,Luís C, Kido,Ederson A., Pandolfi,Valesca, Marcelino-Guimarães,Francismar C., Rodrigues,Fabiana A., Pereira,Gonçalo A.G., Benko-Iseppon,Ana M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000200006
Resumo: Heat shock (HS) leads to the activation of molecular mechanisms, known as HS-response, that prevent damage and enhance survival under stress. Plants have a flexible and specialized network of Heat Shock Factors (HSFs), which are transcription factors that induce the expression of heat shock proteins. The present work aimed to identify and characterize the Glycine max HSF repertory in the Soybean Genome Project (GENOSOJA platform), comparing them with other legumes (Medicago truncatula and Lotus japonicus) in view of current knowledge of Arabidopsis thaliana. The HSF characterization in leguminous plants led to the identification of 25, 19 and 21 candidate ESTs in soybean, Lotus and Medicago, respectively. A search in the SuperSAGE libraries revealed 68 tags distributed in seven HSF gene types. From the total number of obtained tags, more than 70% were related to root tissues (water deficit stress libraries vs. controls), indicating their role in abiotic stress responses, since the root is the first tissue to sense and respond to abiotic stress. Moreover, as heat stress is related to the pressure of dryness, a higher HSF expression was expected at the water deficit libraries. On the other hand, expressive HSF candidates were obtained from the library inoculated with Asian Soybean Rust, inferring crosstalk among genes associated with abiotic and biotic stresses. Evolutionary relationships among sequences were consistent with different HSF classes and subclasses. Expression profiling indicated that regulation of specific genes is associated with the stage of plant development and also with stimuli from other abiotic stresses pointing to the maintenance of HSF expression at a basal level in soybean, favoring its activation under heat-stress conditions.
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spelling Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatulaHSFFabaceaebioinformaticsabiotic stresstranscription factorHeat shock (HS) leads to the activation of molecular mechanisms, known as HS-response, that prevent damage and enhance survival under stress. Plants have a flexible and specialized network of Heat Shock Factors (HSFs), which are transcription factors that induce the expression of heat shock proteins. The present work aimed to identify and characterize the Glycine max HSF repertory in the Soybean Genome Project (GENOSOJA platform), comparing them with other legumes (Medicago truncatula and Lotus japonicus) in view of current knowledge of Arabidopsis thaliana. The HSF characterization in leguminous plants led to the identification of 25, 19 and 21 candidate ESTs in soybean, Lotus and Medicago, respectively. A search in the SuperSAGE libraries revealed 68 tags distributed in seven HSF gene types. From the total number of obtained tags, more than 70% were related to root tissues (water deficit stress libraries vs. controls), indicating their role in abiotic stress responses, since the root is the first tissue to sense and respond to abiotic stress. Moreover, as heat stress is related to the pressure of dryness, a higher HSF expression was expected at the water deficit libraries. On the other hand, expressive HSF candidates were obtained from the library inoculated with Asian Soybean Rust, inferring crosstalk among genes associated with abiotic and biotic stresses. Evolutionary relationships among sequences were consistent with different HSF classes and subclasses. Expression profiling indicated that regulation of specific genes is associated with the stage of plant development and also with stimuli from other abiotic stresses pointing to the maintenance of HSF expression at a basal level in soybean, favoring its activation under heat-stress conditions.Sociedade Brasileira de Genética2012-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000200006Genetics and Molecular Biology v.35 n.1 suppl.1 2012reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572012000200006info:eu-repo/semantics/openAccessSoares-Cavalcanti,Nina M.Belarmino,Luís CKido,Ederson A.Pandolfi,ValescaMarcelino-Guimarães,Francismar C.Rodrigues,Fabiana A.Pereira,Gonçalo A.G.Benko-Iseppon,Ana M.eng2012-06-01T00:00:00Zoai:scielo:S1415-47572012000200006Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2012-06-01T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula
title Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula
spellingShingle Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula
Soares-Cavalcanti,Nina M.
HSF
Fabaceae
bioinformatics
abiotic stress
transcription factor
title_short Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula
title_full Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula
title_fullStr Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula
title_full_unstemmed Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula
title_sort Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula
author Soares-Cavalcanti,Nina M.
author_facet Soares-Cavalcanti,Nina M.
Belarmino,Luís C
Kido,Ederson A.
Pandolfi,Valesca
Marcelino-Guimarães,Francismar C.
Rodrigues,Fabiana A.
Pereira,Gonçalo A.G.
Benko-Iseppon,Ana M.
author_role author
author2 Belarmino,Luís C
Kido,Ederson A.
Pandolfi,Valesca
Marcelino-Guimarães,Francismar C.
Rodrigues,Fabiana A.
Pereira,Gonçalo A.G.
Benko-Iseppon,Ana M.
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Soares-Cavalcanti,Nina M.
Belarmino,Luís C
Kido,Ederson A.
Pandolfi,Valesca
Marcelino-Guimarães,Francismar C.
Rodrigues,Fabiana A.
Pereira,Gonçalo A.G.
Benko-Iseppon,Ana M.
dc.subject.por.fl_str_mv HSF
Fabaceae
bioinformatics
abiotic stress
transcription factor
topic HSF
Fabaceae
bioinformatics
abiotic stress
transcription factor
description Heat shock (HS) leads to the activation of molecular mechanisms, known as HS-response, that prevent damage and enhance survival under stress. Plants have a flexible and specialized network of Heat Shock Factors (HSFs), which are transcription factors that induce the expression of heat shock proteins. The present work aimed to identify and characterize the Glycine max HSF repertory in the Soybean Genome Project (GENOSOJA platform), comparing them with other legumes (Medicago truncatula and Lotus japonicus) in view of current knowledge of Arabidopsis thaliana. The HSF characterization in leguminous plants led to the identification of 25, 19 and 21 candidate ESTs in soybean, Lotus and Medicago, respectively. A search in the SuperSAGE libraries revealed 68 tags distributed in seven HSF gene types. From the total number of obtained tags, more than 70% were related to root tissues (water deficit stress libraries vs. controls), indicating their role in abiotic stress responses, since the root is the first tissue to sense and respond to abiotic stress. Moreover, as heat stress is related to the pressure of dryness, a higher HSF expression was expected at the water deficit libraries. On the other hand, expressive HSF candidates were obtained from the library inoculated with Asian Soybean Rust, inferring crosstalk among genes associated with abiotic and biotic stresses. Evolutionary relationships among sequences were consistent with different HSF classes and subclasses. Expression profiling indicated that regulation of specific genes is associated with the stage of plant development and also with stimuli from other abiotic stresses pointing to the maintenance of HSF expression at a basal level in soybean, favoring its activation under heat-stress conditions.
publishDate 2012
dc.date.none.fl_str_mv 2012-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000200006
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000200006
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572012000200006
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.35 n.1 suppl.1 2012
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
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institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
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