ACE2 diversity in placental mammals reveals the evolutionary strategy of SARS-CoV-2

Detalhes bibliográficos
Autor(a) principal: Fam,Bibiana S.O.
Data de Publicação: 2020
Outros Autores: Vargas-Pinilla,Pedro, Amorim,Carlos Eduardo G., Sortica,Vinicius A., Bortolini,Maria Cátira
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572020000400607
Resumo: Abstract The recent emergence of SARS-CoV-2 is responsible for the current pandemic of COVID-19, which uses the human membrane protein ACE2 as a gateway to host-cell infection. We performed a comparative genomic analysis of 70 ACE2 placental mammal orthologues to identify variations and contribute to the understanding of evolutionary dynamics behind this successful adaptation to infect humans. Our results reveal that 4% of the ACE2 sites are under positive selection, all located in the catalytic domain, suggesting possibly taxon-specific adaptations related to the ACE2 function, such as cardiovascular physiology. Considering all variable sites, we selected 30 of them located at the critical ACE2 binding sites to the SARS-CoV-like viruses for analysis in more detail. Our results reveal a relatively high diversity of ACE2 between placental mammal species, while showing no polymorphism within human populations, at least considering the 30 inter-species variable sites. A perfect scenario for natural selection favored this opportunistic new coronavirus in its trajectory of infecting humans. We suggest that SARS-CoV-2 became a specialist coronavirus for human hosts. Differences in the rate of infection and mortality could be related to the innate immune responses, other unknown genetic factors, as well as non-biological factors.
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spelling ACE2 diversity in placental mammals reveals the evolutionary strategy of SARS-CoV-2ACE2placental mammalsSARS-CoV-2COVID-19inter and intra-species diversityAbstract The recent emergence of SARS-CoV-2 is responsible for the current pandemic of COVID-19, which uses the human membrane protein ACE2 as a gateway to host-cell infection. We performed a comparative genomic analysis of 70 ACE2 placental mammal orthologues to identify variations and contribute to the understanding of evolutionary dynamics behind this successful adaptation to infect humans. Our results reveal that 4% of the ACE2 sites are under positive selection, all located in the catalytic domain, suggesting possibly taxon-specific adaptations related to the ACE2 function, such as cardiovascular physiology. Considering all variable sites, we selected 30 of them located at the critical ACE2 binding sites to the SARS-CoV-like viruses for analysis in more detail. Our results reveal a relatively high diversity of ACE2 between placental mammal species, while showing no polymorphism within human populations, at least considering the 30 inter-species variable sites. A perfect scenario for natural selection favored this opportunistic new coronavirus in its trajectory of infecting humans. We suggest that SARS-CoV-2 became a specialist coronavirus for human hosts. Differences in the rate of infection and mortality could be related to the innate immune responses, other unknown genetic factors, as well as non-biological factors.Sociedade Brasileira de Genética2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572020000400607Genetics and Molecular Biology v.43 n.2 2020reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2020-0104info:eu-repo/semantics/openAccessFam,Bibiana S.O.Vargas-Pinilla,PedroAmorim,Carlos Eduardo G.Sortica,Vinicius A.Bortolini,Maria Cátiraeng2020-06-05T00:00:00Zoai:scielo:S1415-47572020000400607Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2020-06-05T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv ACE2 diversity in placental mammals reveals the evolutionary strategy of SARS-CoV-2
title ACE2 diversity in placental mammals reveals the evolutionary strategy of SARS-CoV-2
spellingShingle ACE2 diversity in placental mammals reveals the evolutionary strategy of SARS-CoV-2
Fam,Bibiana S.O.
ACE2
placental mammals
SARS-CoV-2
COVID-19
inter and intra-species diversity
title_short ACE2 diversity in placental mammals reveals the evolutionary strategy of SARS-CoV-2
title_full ACE2 diversity in placental mammals reveals the evolutionary strategy of SARS-CoV-2
title_fullStr ACE2 diversity in placental mammals reveals the evolutionary strategy of SARS-CoV-2
title_full_unstemmed ACE2 diversity in placental mammals reveals the evolutionary strategy of SARS-CoV-2
title_sort ACE2 diversity in placental mammals reveals the evolutionary strategy of SARS-CoV-2
author Fam,Bibiana S.O.
author_facet Fam,Bibiana S.O.
Vargas-Pinilla,Pedro
Amorim,Carlos Eduardo G.
Sortica,Vinicius A.
Bortolini,Maria Cátira
author_role author
author2 Vargas-Pinilla,Pedro
Amorim,Carlos Eduardo G.
Sortica,Vinicius A.
Bortolini,Maria Cátira
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Fam,Bibiana S.O.
Vargas-Pinilla,Pedro
Amorim,Carlos Eduardo G.
Sortica,Vinicius A.
Bortolini,Maria Cátira
dc.subject.por.fl_str_mv ACE2
placental mammals
SARS-CoV-2
COVID-19
inter and intra-species diversity
topic ACE2
placental mammals
SARS-CoV-2
COVID-19
inter and intra-species diversity
description Abstract The recent emergence of SARS-CoV-2 is responsible for the current pandemic of COVID-19, which uses the human membrane protein ACE2 as a gateway to host-cell infection. We performed a comparative genomic analysis of 70 ACE2 placental mammal orthologues to identify variations and contribute to the understanding of evolutionary dynamics behind this successful adaptation to infect humans. Our results reveal that 4% of the ACE2 sites are under positive selection, all located in the catalytic domain, suggesting possibly taxon-specific adaptations related to the ACE2 function, such as cardiovascular physiology. Considering all variable sites, we selected 30 of them located at the critical ACE2 binding sites to the SARS-CoV-like viruses for analysis in more detail. Our results reveal a relatively high diversity of ACE2 between placental mammal species, while showing no polymorphism within human populations, at least considering the 30 inter-species variable sites. A perfect scenario for natural selection favored this opportunistic new coronavirus in its trajectory of infecting humans. We suggest that SARS-CoV-2 became a specialist coronavirus for human hosts. Differences in the rate of infection and mortality could be related to the innate immune responses, other unknown genetic factors, as well as non-biological factors.
publishDate 2020
dc.date.none.fl_str_mv 2020-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572020000400607
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572020000400607
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4685-gmb-2020-0104
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.43 n.2 2020
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
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institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
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