The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes

Detalhes bibliográficos
Autor(a) principal: Yuan,Xiao-Long
Data de Publicação: 2017
Outros Autores: Mao,Xin-Xin, Liu,Xin-Min, Cheng,Sen, Zhang,Peng, Zhang,Zhong-Feng
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000500844
Resumo: Abstract Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome sequence of E. album was determined using a high-throughput sequencing platform. The circular mitogenome was found to be 28,081 nucleotides in length and comprised of 17 protein-coding genes, 24 tRNA genes, and 2 rRNA genes. The nucleotide composition of the genome was A+T-biased (74.13%). Group-II introns were found in the nad1, nad5, and cob genes. The most frequently used codon of protein-coding genes was UAU. Isoleucine was identified as the most common amino acid, while proline was the least common amino acid in protein-coding genes. The gene-arrangement order is nearly the same when compared with other Ascomycota mitogenomes. Phylogenetic relationships based on the shared protein-coding genes revealed that E. album is closely related to the Cordycipitaceae family, with a high-confidence support value (100%). The availability of the mitogenome of E. album will shed light on the molecular systematic and genetic differentiation of this species.
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spelling The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomesEngyodontium albummitochondrial genomecomparative analysisphylogenetic analysesAbstract Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome sequence of E. album was determined using a high-throughput sequencing platform. The circular mitogenome was found to be 28,081 nucleotides in length and comprised of 17 protein-coding genes, 24 tRNA genes, and 2 rRNA genes. The nucleotide composition of the genome was A+T-biased (74.13%). Group-II introns were found in the nad1, nad5, and cob genes. The most frequently used codon of protein-coding genes was UAU. Isoleucine was identified as the most common amino acid, while proline was the least common amino acid in protein-coding genes. The gene-arrangement order is nearly the same when compared with other Ascomycota mitogenomes. Phylogenetic relationships based on the shared protein-coding genes revealed that E. album is closely related to the Cordycipitaceae family, with a high-confidence support value (100%). The availability of the mitogenome of E. album will shed light on the molecular systematic and genetic differentiation of this species.Sociedade Brasileira de Genética2017-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000500844Genetics and Molecular Biology v.40 n.4 2017reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2016-0308info:eu-repo/semantics/openAccessYuan,Xiao-LongMao,Xin-XinLiu,Xin-MinCheng,SenZhang,PengZhang,Zhong-Fengeng2017-11-21T00:00:00Zoai:scielo:S1415-47572017000500844Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2017-11-21T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
title The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
spellingShingle The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
Yuan,Xiao-Long
Engyodontium album
mitochondrial genome
comparative analysis
phylogenetic analyses
title_short The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
title_full The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
title_fullStr The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
title_full_unstemmed The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
title_sort The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
author Yuan,Xiao-Long
author_facet Yuan,Xiao-Long
Mao,Xin-Xin
Liu,Xin-Min
Cheng,Sen
Zhang,Peng
Zhang,Zhong-Feng
author_role author
author2 Mao,Xin-Xin
Liu,Xin-Min
Cheng,Sen
Zhang,Peng
Zhang,Zhong-Feng
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Yuan,Xiao-Long
Mao,Xin-Xin
Liu,Xin-Min
Cheng,Sen
Zhang,Peng
Zhang,Zhong-Feng
dc.subject.por.fl_str_mv Engyodontium album
mitochondrial genome
comparative analysis
phylogenetic analyses
topic Engyodontium album
mitochondrial genome
comparative analysis
phylogenetic analyses
description Abstract Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome sequence of E. album was determined using a high-throughput sequencing platform. The circular mitogenome was found to be 28,081 nucleotides in length and comprised of 17 protein-coding genes, 24 tRNA genes, and 2 rRNA genes. The nucleotide composition of the genome was A+T-biased (74.13%). Group-II introns were found in the nad1, nad5, and cob genes. The most frequently used codon of protein-coding genes was UAU. Isoleucine was identified as the most common amino acid, while proline was the least common amino acid in protein-coding genes. The gene-arrangement order is nearly the same when compared with other Ascomycota mitogenomes. Phylogenetic relationships based on the shared protein-coding genes revealed that E. album is closely related to the Cordycipitaceae family, with a high-confidence support value (100%). The availability of the mitogenome of E. album will shed light on the molecular systematic and genetic differentiation of this species.
publishDate 2017
dc.date.none.fl_str_mv 2017-12-01
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000500844
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000500844
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4685-gmb-2016-0308
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dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.40 n.4 2017
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
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