The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Genetics and Molecular Biology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000500844 |
Resumo: | Abstract Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome sequence of E. album was determined using a high-throughput sequencing platform. The circular mitogenome was found to be 28,081 nucleotides in length and comprised of 17 protein-coding genes, 24 tRNA genes, and 2 rRNA genes. The nucleotide composition of the genome was A+T-biased (74.13%). Group-II introns were found in the nad1, nad5, and cob genes. The most frequently used codon of protein-coding genes was UAU. Isoleucine was identified as the most common amino acid, while proline was the least common amino acid in protein-coding genes. The gene-arrangement order is nearly the same when compared with other Ascomycota mitogenomes. Phylogenetic relationships based on the shared protein-coding genes revealed that E. album is closely related to the Cordycipitaceae family, with a high-confidence support value (100%). The availability of the mitogenome of E. album will shed light on the molecular systematic and genetic differentiation of this species. |
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The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomesEngyodontium albummitochondrial genomecomparative analysisphylogenetic analysesAbstract Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome sequence of E. album was determined using a high-throughput sequencing platform. The circular mitogenome was found to be 28,081 nucleotides in length and comprised of 17 protein-coding genes, 24 tRNA genes, and 2 rRNA genes. The nucleotide composition of the genome was A+T-biased (74.13%). Group-II introns were found in the nad1, nad5, and cob genes. The most frequently used codon of protein-coding genes was UAU. Isoleucine was identified as the most common amino acid, while proline was the least common amino acid in protein-coding genes. The gene-arrangement order is nearly the same when compared with other Ascomycota mitogenomes. Phylogenetic relationships based on the shared protein-coding genes revealed that E. album is closely related to the Cordycipitaceae family, with a high-confidence support value (100%). The availability of the mitogenome of E. album will shed light on the molecular systematic and genetic differentiation of this species.Sociedade Brasileira de Genética2017-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000500844Genetics and Molecular Biology v.40 n.4 2017reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2016-0308info:eu-repo/semantics/openAccessYuan,Xiao-LongMao,Xin-XinLiu,Xin-MinCheng,SenZhang,PengZhang,Zhong-Fengeng2017-11-21T00:00:00Zoai:scielo:S1415-47572017000500844Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2017-11-21T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false |
dc.title.none.fl_str_mv |
The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes |
title |
The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes |
spellingShingle |
The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes Yuan,Xiao-Long Engyodontium album mitochondrial genome comparative analysis phylogenetic analyses |
title_short |
The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes |
title_full |
The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes |
title_fullStr |
The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes |
title_full_unstemmed |
The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes |
title_sort |
The complete mitochondrial genome of Engyodontium album and comparative analyses with Ascomycota mitogenomes |
author |
Yuan,Xiao-Long |
author_facet |
Yuan,Xiao-Long Mao,Xin-Xin Liu,Xin-Min Cheng,Sen Zhang,Peng Zhang,Zhong-Feng |
author_role |
author |
author2 |
Mao,Xin-Xin Liu,Xin-Min Cheng,Sen Zhang,Peng Zhang,Zhong-Feng |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Yuan,Xiao-Long Mao,Xin-Xin Liu,Xin-Min Cheng,Sen Zhang,Peng Zhang,Zhong-Feng |
dc.subject.por.fl_str_mv |
Engyodontium album mitochondrial genome comparative analysis phylogenetic analyses |
topic |
Engyodontium album mitochondrial genome comparative analysis phylogenetic analyses |
description |
Abstract Engyodontium album is a widespread pathogen that causes different kinds of dermatoses and respiratory tract diseases in humans and animals. In spite of its perniciousness, the basic genetic and molecular background of this species remains poorly understood. In this study, the mitochondrial genome sequence of E. album was determined using a high-throughput sequencing platform. The circular mitogenome was found to be 28,081 nucleotides in length and comprised of 17 protein-coding genes, 24 tRNA genes, and 2 rRNA genes. The nucleotide composition of the genome was A+T-biased (74.13%). Group-II introns were found in the nad1, nad5, and cob genes. The most frequently used codon of protein-coding genes was UAU. Isoleucine was identified as the most common amino acid, while proline was the least common amino acid in protein-coding genes. The gene-arrangement order is nearly the same when compared with other Ascomycota mitogenomes. Phylogenetic relationships based on the shared protein-coding genes revealed that E. album is closely related to the Cordycipitaceae family, with a high-confidence support value (100%). The availability of the mitogenome of E. album will shed light on the molecular systematic and genetic differentiation of this species. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-12-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000500844 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000500844 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1678-4685-gmb-2016-0308 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
Genetics and Molecular Biology v.40 n.4 2017 reponame:Genetics and Molecular Biology instname:Sociedade Brasileira de Genética (SBG) instacron:SBG |
instname_str |
Sociedade Brasileira de Genética (SBG) |
instacron_str |
SBG |
institution |
SBG |
reponame_str |
Genetics and Molecular Biology |
collection |
Genetics and Molecular Biology |
repository.name.fl_str_mv |
Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG) |
repository.mail.fl_str_mv |
||editor@gmb.org.br |
_version_ |
1752122387907739648 |