TLR4 and TLR8 variability in Amazonian and West Indian manatee species from Brazil
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Genetics and Molecular Biology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000300206 |
Resumo: | Abstract Amazonian (Trichechus inunguis) and West Indian (Trichechus manatus) manatees are aquatic mammals vulnerable to extinction found in the Amazon basin and the coastal western Atlantic. Toll-like receptors (TLR) play a key role in recognizing pathogen-associated molecular patterns using leucine-rich repeats (LRRs). We described the diversity of TLR4 and TLR8 genes in these two species of manatee. Amazonian manatee showed seven SNPs in TLR4 and the eight in TLR8, while West Indian manatee shared four and six of those SNPs, respectively. In our analysis, TLR4 showed one non-conservative amino acid replacement substitution in LRR7 and LRR8, on the other hand, TLR8 was less variable and showed only conserved amino acid substitutions. Selection analysis showed that only one TLR4 site was subjected to positive selection and none in TLR8. TLR4 in manatees did not show any evidence of convergent evolution compared to species of the cetacean lineage. Differences in TLR4 and TLR8 polymorphism may be related to distinct selection by pathogens, population reduction of West Indian manatees, or an expected consequence of population expansion in Amazonian manatees. Future studies combining pathogen association and TLR polymorphism may clarify possible roles of these genes and be used for conservation purposes of manatee species. |
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TLR4 and TLR8 variability in Amazonian and West Indian manatee species from BrazilGenetic diversitySirenianToll-like receptoraquatic mammalsAbstract Amazonian (Trichechus inunguis) and West Indian (Trichechus manatus) manatees are aquatic mammals vulnerable to extinction found in the Amazon basin and the coastal western Atlantic. Toll-like receptors (TLR) play a key role in recognizing pathogen-associated molecular patterns using leucine-rich repeats (LRRs). We described the diversity of TLR4 and TLR8 genes in these two species of manatee. Amazonian manatee showed seven SNPs in TLR4 and the eight in TLR8, while West Indian manatee shared four and six of those SNPs, respectively. In our analysis, TLR4 showed one non-conservative amino acid replacement substitution in LRR7 and LRR8, on the other hand, TLR8 was less variable and showed only conserved amino acid substitutions. Selection analysis showed that only one TLR4 site was subjected to positive selection and none in TLR8. TLR4 in manatees did not show any evidence of convergent evolution compared to species of the cetacean lineage. Differences in TLR4 and TLR8 polymorphism may be related to distinct selection by pathogens, population reduction of West Indian manatees, or an expected consequence of population expansion in Amazonian manatees. Future studies combining pathogen association and TLR polymorphism may clarify possible roles of these genes and be used for conservation purposes of manatee species.Sociedade Brasileira de Genética2021-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000300206Genetics and Molecular Biology v.44 n.2 2021reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2019-0252info:eu-repo/semantics/openAccessOliveira,Tatiana Maia deBurlamaqui,Tibério Cesar TortolaSá,André Luiz Alves deBreaux,BreannaLuna,Fábia de OliveiraAttademo,Fernanda Löffler NiemeyerKlautau,Alex Garcia Cavalleiro de MacedoOliveira,Jairo MouraSena,LeonardoCriscitiello,Michael F.Schneider,Maria Paula Cruzeng2021-04-09T00:00:00Zoai:scielo:S1415-47572021000300206Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2021-04-09T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false |
dc.title.none.fl_str_mv |
TLR4 and TLR8 variability in Amazonian and West Indian manatee species from Brazil |
title |
TLR4 and TLR8 variability in Amazonian and West Indian manatee species from Brazil |
spellingShingle |
TLR4 and TLR8 variability in Amazonian and West Indian manatee species from Brazil Oliveira,Tatiana Maia de Genetic diversity Sirenian Toll-like receptor aquatic mammals |
title_short |
TLR4 and TLR8 variability in Amazonian and West Indian manatee species from Brazil |
title_full |
TLR4 and TLR8 variability in Amazonian and West Indian manatee species from Brazil |
title_fullStr |
TLR4 and TLR8 variability in Amazonian and West Indian manatee species from Brazil |
title_full_unstemmed |
TLR4 and TLR8 variability in Amazonian and West Indian manatee species from Brazil |
title_sort |
TLR4 and TLR8 variability in Amazonian and West Indian manatee species from Brazil |
author |
Oliveira,Tatiana Maia de |
author_facet |
Oliveira,Tatiana Maia de Burlamaqui,Tibério Cesar Tortola Sá,André Luiz Alves de Breaux,Breanna Luna,Fábia de Oliveira Attademo,Fernanda Löffler Niemeyer Klautau,Alex Garcia Cavalleiro de Macedo Oliveira,Jairo Moura Sena,Leonardo Criscitiello,Michael F. Schneider,Maria Paula Cruz |
author_role |
author |
author2 |
Burlamaqui,Tibério Cesar Tortola Sá,André Luiz Alves de Breaux,Breanna Luna,Fábia de Oliveira Attademo,Fernanda Löffler Niemeyer Klautau,Alex Garcia Cavalleiro de Macedo Oliveira,Jairo Moura Sena,Leonardo Criscitiello,Michael F. Schneider,Maria Paula Cruz |
author2_role |
author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Oliveira,Tatiana Maia de Burlamaqui,Tibério Cesar Tortola Sá,André Luiz Alves de Breaux,Breanna Luna,Fábia de Oliveira Attademo,Fernanda Löffler Niemeyer Klautau,Alex Garcia Cavalleiro de Macedo Oliveira,Jairo Moura Sena,Leonardo Criscitiello,Michael F. Schneider,Maria Paula Cruz |
dc.subject.por.fl_str_mv |
Genetic diversity Sirenian Toll-like receptor aquatic mammals |
topic |
Genetic diversity Sirenian Toll-like receptor aquatic mammals |
description |
Abstract Amazonian (Trichechus inunguis) and West Indian (Trichechus manatus) manatees are aquatic mammals vulnerable to extinction found in the Amazon basin and the coastal western Atlantic. Toll-like receptors (TLR) play a key role in recognizing pathogen-associated molecular patterns using leucine-rich repeats (LRRs). We described the diversity of TLR4 and TLR8 genes in these two species of manatee. Amazonian manatee showed seven SNPs in TLR4 and the eight in TLR8, while West Indian manatee shared four and six of those SNPs, respectively. In our analysis, TLR4 showed one non-conservative amino acid replacement substitution in LRR7 and LRR8, on the other hand, TLR8 was less variable and showed only conserved amino acid substitutions. Selection analysis showed that only one TLR4 site was subjected to positive selection and none in TLR8. TLR4 in manatees did not show any evidence of convergent evolution compared to species of the cetacean lineage. Differences in TLR4 and TLR8 polymorphism may be related to distinct selection by pathogens, population reduction of West Indian manatees, or an expected consequence of population expansion in Amazonian manatees. Future studies combining pathogen association and TLR polymorphism may clarify possible roles of these genes and be used for conservation purposes of manatee species. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000300206 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000300206 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1678-4685-gmb-2019-0252 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
Genetics and Molecular Biology v.44 n.2 2021 reponame:Genetics and Molecular Biology instname:Sociedade Brasileira de Genética (SBG) instacron:SBG |
instname_str |
Sociedade Brasileira de Genética (SBG) |
instacron_str |
SBG |
institution |
SBG |
reponame_str |
Genetics and Molecular Biology |
collection |
Genetics and Molecular Biology |
repository.name.fl_str_mv |
Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG) |
repository.mail.fl_str_mv |
||editor@gmb.org.br |
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1752122390501916672 |