Genetic diversity and DNA content of three South American and three Eurasiatic Trifolium species

Detalhes bibliográficos
Autor(a) principal: Rizza,Marco Dalla
Data de Publicação: 2007
Outros Autores: Real,Daniel, Reyno,Rafael, Porro,Valentina, Burgueño,Juan, Errico,Eugenia, Quesenberry,Kenneth H.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000600015
Resumo: Six species of Trifolium (T. polymorphum Poir., T. riograndense Burkart, T. argentinense Speg., T. medium L., T. pratense L. and T. repens L.) were analyzed using inter-simple sequence repeats (ISSR) markers. Six selected primers generated 186 polymerase chain reaction (PCR) products exploring 112 loci in 34 genotypes analyzed with molecular sizes ranging from 200 to 1300 bp. These primers were able to discriminate among and within species, with the PCR products being on average 41.6% species-specific and 59.9% polymorphic at the within species level. Nuclear DNA content was determined by flow cytometry and revealed variation among species. The 1Cx genome size values were calculated and were found to range from 0.46 pg (T. pratense) to 0.96 pg (T. polymorphum). Genome size values of South American species were higher than those of Eurasiatic origin. The analyses of the molecular data grouped the six species in agreement with their geographical origin and clearly differentiate T. polymorphum from T. argentinense. The Eurasiatic group showed the highest average of species-specific bands (45.3%) and the South American group exhibited the highest amount of total bands (59.7). The highest level of intra-species polymorphisms was detected in T. argentinense (92.9%), followed by T. medium (89.5%).
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spelling Genetic diversity and DNA content of three South American and three Eurasiatic Trifolium speciesDNA contentgenetic variabilityinter-SSRTrifolium sppSix species of Trifolium (T. polymorphum Poir., T. riograndense Burkart, T. argentinense Speg., T. medium L., T. pratense L. and T. repens L.) were analyzed using inter-simple sequence repeats (ISSR) markers. Six selected primers generated 186 polymerase chain reaction (PCR) products exploring 112 loci in 34 genotypes analyzed with molecular sizes ranging from 200 to 1300 bp. These primers were able to discriminate among and within species, with the PCR products being on average 41.6% species-specific and 59.9% polymorphic at the within species level. Nuclear DNA content was determined by flow cytometry and revealed variation among species. The 1Cx genome size values were calculated and were found to range from 0.46 pg (T. pratense) to 0.96 pg (T. polymorphum). Genome size values of South American species were higher than those of Eurasiatic origin. The analyses of the molecular data grouped the six species in agreement with their geographical origin and clearly differentiate T. polymorphum from T. argentinense. The Eurasiatic group showed the highest average of species-specific bands (45.3%) and the South American group exhibited the highest amount of total bands (59.7). The highest level of intra-species polymorphisms was detected in T. argentinense (92.9%), followed by T. medium (89.5%).Sociedade Brasileira de Genética2007-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000600015Genetics and Molecular Biology v.30 n.4 2007reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572007000600015info:eu-repo/semantics/openAccessRizza,Marco DallaReal,DanielReyno,RafaelPorro,ValentinaBurgueño,JuanErrico,EugeniaQuesenberry,Kenneth H.eng2007-12-13T00:00:00Zoai:scielo:S1415-47572007000600015Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2007-12-13T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Genetic diversity and DNA content of three South American and three Eurasiatic Trifolium species
title Genetic diversity and DNA content of three South American and three Eurasiatic Trifolium species
spellingShingle Genetic diversity and DNA content of three South American and three Eurasiatic Trifolium species
Rizza,Marco Dalla
DNA content
genetic variability
inter-SSR
Trifolium spp
title_short Genetic diversity and DNA content of three South American and three Eurasiatic Trifolium species
title_full Genetic diversity and DNA content of three South American and three Eurasiatic Trifolium species
title_fullStr Genetic diversity and DNA content of three South American and three Eurasiatic Trifolium species
title_full_unstemmed Genetic diversity and DNA content of three South American and three Eurasiatic Trifolium species
title_sort Genetic diversity and DNA content of three South American and three Eurasiatic Trifolium species
author Rizza,Marco Dalla
author_facet Rizza,Marco Dalla
Real,Daniel
Reyno,Rafael
Porro,Valentina
Burgueño,Juan
Errico,Eugenia
Quesenberry,Kenneth H.
author_role author
author2 Real,Daniel
Reyno,Rafael
Porro,Valentina
Burgueño,Juan
Errico,Eugenia
Quesenberry,Kenneth H.
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Rizza,Marco Dalla
Real,Daniel
Reyno,Rafael
Porro,Valentina
Burgueño,Juan
Errico,Eugenia
Quesenberry,Kenneth H.
dc.subject.por.fl_str_mv DNA content
genetic variability
inter-SSR
Trifolium spp
topic DNA content
genetic variability
inter-SSR
Trifolium spp
description Six species of Trifolium (T. polymorphum Poir., T. riograndense Burkart, T. argentinense Speg., T. medium L., T. pratense L. and T. repens L.) were analyzed using inter-simple sequence repeats (ISSR) markers. Six selected primers generated 186 polymerase chain reaction (PCR) products exploring 112 loci in 34 genotypes analyzed with molecular sizes ranging from 200 to 1300 bp. These primers were able to discriminate among and within species, with the PCR products being on average 41.6% species-specific and 59.9% polymorphic at the within species level. Nuclear DNA content was determined by flow cytometry and revealed variation among species. The 1Cx genome size values were calculated and were found to range from 0.46 pg (T. pratense) to 0.96 pg (T. polymorphum). Genome size values of South American species were higher than those of Eurasiatic origin. The analyses of the molecular data grouped the six species in agreement with their geographical origin and clearly differentiate T. polymorphum from T. argentinense. The Eurasiatic group showed the highest average of species-specific bands (45.3%) and the South American group exhibited the highest amount of total bands (59.7). The highest level of intra-species polymorphisms was detected in T. argentinense (92.9%), followed by T. medium (89.5%).
publishDate 2007
dc.date.none.fl_str_mv 2007-01-01
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000600015
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dc.relation.none.fl_str_mv 10.1590/S1415-47572007000600015
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.30 n.4 2007
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
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