MHC class I loci of the Bar-Headed goose (Anser indicus)

Detalhes bibliográficos
Autor(a) principal: Liang,Qinglong
Data de Publicação: 2010
Outros Autores: Wei,Lei, Wang,Xinwei, He,Hongxuan
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300031
Resumo: MHC class I proteins mediate functions in anti-pathogen defense. MHC diversity has already been investigated by many studies in model avian species, but here we chose the bar-headed goose, a worldwide migrant bird, as a non-model avian species. Sequences from exons encoding the peptide-binding region (PBR) of MHC class I molecules were isolated from liver genomic DNA, to investigate variation in these genes. These are the first MHC class I partial sequences of the bar-headed goose to be reported. A preliminary analysis suggests the presence of at least four MHC class I genes, which share great similarity with those of the goose and duck. A phylogenetic analysis of bar-headed goose, goose and duck MHC class I sequences using the NJ method supports the idea that they all cluster within the anseriforms clade.
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spelling MHC class I loci of the Bar-Headed goose (Anser indicus)MHC IAnser indicuspolymorphismphylogenetic analysisMHC class I proteins mediate functions in anti-pathogen defense. MHC diversity has already been investigated by many studies in model avian species, but here we chose the bar-headed goose, a worldwide migrant bird, as a non-model avian species. Sequences from exons encoding the peptide-binding region (PBR) of MHC class I molecules were isolated from liver genomic DNA, to investigate variation in these genes. These are the first MHC class I partial sequences of the bar-headed goose to be reported. A preliminary analysis suggests the presence of at least four MHC class I genes, which share great similarity with those of the goose and duck. A phylogenetic analysis of bar-headed goose, goose and duck MHC class I sequences using the NJ method supports the idea that they all cluster within the anseriforms clade.Sociedade Brasileira de Genética2010-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300031Genetics and Molecular Biology v.33 n.3 2010reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572010000300031info:eu-repo/semantics/openAccessLiang,QinglongWei,LeiWang,XinweiHe,Hongxuaneng2010-08-18T00:00:00Zoai:scielo:S1415-47572010000300031Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2010-08-18T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv MHC class I loci of the Bar-Headed goose (Anser indicus)
title MHC class I loci of the Bar-Headed goose (Anser indicus)
spellingShingle MHC class I loci of the Bar-Headed goose (Anser indicus)
Liang,Qinglong
MHC I
Anser indicus
polymorphism
phylogenetic analysis
title_short MHC class I loci of the Bar-Headed goose (Anser indicus)
title_full MHC class I loci of the Bar-Headed goose (Anser indicus)
title_fullStr MHC class I loci of the Bar-Headed goose (Anser indicus)
title_full_unstemmed MHC class I loci of the Bar-Headed goose (Anser indicus)
title_sort MHC class I loci of the Bar-Headed goose (Anser indicus)
author Liang,Qinglong
author_facet Liang,Qinglong
Wei,Lei
Wang,Xinwei
He,Hongxuan
author_role author
author2 Wei,Lei
Wang,Xinwei
He,Hongxuan
author2_role author
author
author
dc.contributor.author.fl_str_mv Liang,Qinglong
Wei,Lei
Wang,Xinwei
He,Hongxuan
dc.subject.por.fl_str_mv MHC I
Anser indicus
polymorphism
phylogenetic analysis
topic MHC I
Anser indicus
polymorphism
phylogenetic analysis
description MHC class I proteins mediate functions in anti-pathogen defense. MHC diversity has already been investigated by many studies in model avian species, but here we chose the bar-headed goose, a worldwide migrant bird, as a non-model avian species. Sequences from exons encoding the peptide-binding region (PBR) of MHC class I molecules were isolated from liver genomic DNA, to investigate variation in these genes. These are the first MHC class I partial sequences of the bar-headed goose to be reported. A preliminary analysis suggests the presence of at least four MHC class I genes, which share great similarity with those of the goose and duck. A phylogenetic analysis of bar-headed goose, goose and duck MHC class I sequences using the NJ method supports the idea that they all cluster within the anseriforms clade.
publishDate 2010
dc.date.none.fl_str_mv 2010-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300031
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000300031
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572010000300031
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.33 n.3 2010
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
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instname_str Sociedade Brasileira de Genética (SBG)
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reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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