Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa

Detalhes bibliográficos
Autor(a) principal: Souza,Alessandra A. de
Data de Publicação: 2007
Outros Autores: Takita,Marco A., Coletta-Filho,Helvécio D., Targon,Maria Luisa P.N., Carlos,Eduardo F., Locali-Fabris,Eliane C., Amaral,Alexandre M., Freitas-Astúa,Juliana, Silva-Pinhati,Ana Carla O., Boscariol-Camargo,Raquel L., Berger,Irving J., Rodrigues,Carolina M., Reis,Marcelo S., Machado,Marcos A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000500023
Resumo: In order to understand the genetic responses resulting from physiological changes that occur in plants displaying citrus variegated chlorosis (CVC) symptoms, we adopted a strategy of comparing two EST libraries from sweet orange [Citrus sinensis (L.) Osbeck]. One of them was prepared with plants showing typical CVC symptoms caused by Xylella fastidiosa and the other with non-inoculated plants. We obtained 15,944 ESTs by sequencing the two cDNA libraries. Using an in silico hybridization strategy, 37 genes were found to have significant variation at the transcriptional level. Within this subset, 21 were up-regulated and 16 were down-regulated in plants with CVC. The main functional categories of the down-regulated transcripts in plants with CVC were associated with metabolism, protein modification, energy and transport facilitation. The majority of the up-regulated transcripts were associated with metabolism and defense response. Some transcripts associated with adaptation to stress conditions were up-regulated in plants with CVC and could explain why plants remain alive even under severe water and nutritional stress. Others of the up-regulated transcripts are related to defense response suggesting that sweet orange plants activate their defense machinery. The genes associated with stress response might be expressed as part of a secondary response related to physiological alterations caused by the infection.
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spelling Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosasweet orangeESTCVCcompatible interactionIn order to understand the genetic responses resulting from physiological changes that occur in plants displaying citrus variegated chlorosis (CVC) symptoms, we adopted a strategy of comparing two EST libraries from sweet orange [Citrus sinensis (L.) Osbeck]. One of them was prepared with plants showing typical CVC symptoms caused by Xylella fastidiosa and the other with non-inoculated plants. We obtained 15,944 ESTs by sequencing the two cDNA libraries. Using an in silico hybridization strategy, 37 genes were found to have significant variation at the transcriptional level. Within this subset, 21 were up-regulated and 16 were down-regulated in plants with CVC. The main functional categories of the down-regulated transcripts in plants with CVC were associated with metabolism, protein modification, energy and transport facilitation. The majority of the up-regulated transcripts were associated with metabolism and defense response. Some transcripts associated with adaptation to stress conditions were up-regulated in plants with CVC and could explain why plants remain alive even under severe water and nutritional stress. Others of the up-regulated transcripts are related to defense response suggesting that sweet orange plants activate their defense machinery. The genes associated with stress response might be expressed as part of a secondary response related to physiological alterations caused by the infection.Sociedade Brasileira de Genética2007-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000500023Genetics and Molecular Biology v.30 n.3 suppl.0 2007reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572007000500023info:eu-repo/semantics/openAccessSouza,Alessandra A. deTakita,Marco A.Coletta-Filho,Helvécio D.Targon,Maria Luisa P.N.Carlos,Eduardo F.Locali-Fabris,Eliane C.Amaral,Alexandre M.Freitas-Astúa,JulianaSilva-Pinhati,Ana Carla O.Boscariol-Camargo,Raquel L.Berger,Irving J.Rodrigues,Carolina M.Reis,Marcelo S.Machado,Marcos A.eng2007-11-06T00:00:00Zoai:scielo:S1415-47572007000500023Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2007-11-06T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa
title Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa
spellingShingle Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa
Souza,Alessandra A. de
sweet orange
EST
CVC
compatible interaction
title_short Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa
title_full Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa
title_fullStr Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa
title_full_unstemmed Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa
title_sort Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa
author Souza,Alessandra A. de
author_facet Souza,Alessandra A. de
Takita,Marco A.
Coletta-Filho,Helvécio D.
Targon,Maria Luisa P.N.
Carlos,Eduardo F.
Locali-Fabris,Eliane C.
Amaral,Alexandre M.
Freitas-Astúa,Juliana
Silva-Pinhati,Ana Carla O.
Boscariol-Camargo,Raquel L.
Berger,Irving J.
Rodrigues,Carolina M.
Reis,Marcelo S.
Machado,Marcos A.
author_role author
author2 Takita,Marco A.
Coletta-Filho,Helvécio D.
Targon,Maria Luisa P.N.
Carlos,Eduardo F.
Locali-Fabris,Eliane C.
Amaral,Alexandre M.
Freitas-Astúa,Juliana
Silva-Pinhati,Ana Carla O.
Boscariol-Camargo,Raquel L.
Berger,Irving J.
Rodrigues,Carolina M.
Reis,Marcelo S.
Machado,Marcos A.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Souza,Alessandra A. de
Takita,Marco A.
Coletta-Filho,Helvécio D.
Targon,Maria Luisa P.N.
Carlos,Eduardo F.
Locali-Fabris,Eliane C.
Amaral,Alexandre M.
Freitas-Astúa,Juliana
Silva-Pinhati,Ana Carla O.
Boscariol-Camargo,Raquel L.
Berger,Irving J.
Rodrigues,Carolina M.
Reis,Marcelo S.
Machado,Marcos A.
dc.subject.por.fl_str_mv sweet orange
EST
CVC
compatible interaction
topic sweet orange
EST
CVC
compatible interaction
description In order to understand the genetic responses resulting from physiological changes that occur in plants displaying citrus variegated chlorosis (CVC) symptoms, we adopted a strategy of comparing two EST libraries from sweet orange [Citrus sinensis (L.) Osbeck]. One of them was prepared with plants showing typical CVC symptoms caused by Xylella fastidiosa and the other with non-inoculated plants. We obtained 15,944 ESTs by sequencing the two cDNA libraries. Using an in silico hybridization strategy, 37 genes were found to have significant variation at the transcriptional level. Within this subset, 21 were up-regulated and 16 were down-regulated in plants with CVC. The main functional categories of the down-regulated transcripts in plants with CVC were associated with metabolism, protein modification, energy and transport facilitation. The majority of the up-regulated transcripts were associated with metabolism and defense response. Some transcripts associated with adaptation to stress conditions were up-regulated in plants with CVC and could explain why plants remain alive even under severe water and nutritional stress. Others of the up-regulated transcripts are related to defense response suggesting that sweet orange plants activate their defense machinery. The genes associated with stress response might be expressed as part of a secondary response related to physiological alterations caused by the infection.
publishDate 2007
dc.date.none.fl_str_mv 2007-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000500023
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000500023
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572007000500023
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.30 n.3 suppl.0 2007
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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