Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa
Autor(a) principal: | |
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Data de Publicação: | 2007 |
Outros Autores: | , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Genetics and Molecular Biology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000500023 |
Resumo: | In order to understand the genetic responses resulting from physiological changes that occur in plants displaying citrus variegated chlorosis (CVC) symptoms, we adopted a strategy of comparing two EST libraries from sweet orange [Citrus sinensis (L.) Osbeck]. One of them was prepared with plants showing typical CVC symptoms caused by Xylella fastidiosa and the other with non-inoculated plants. We obtained 15,944 ESTs by sequencing the two cDNA libraries. Using an in silico hybridization strategy, 37 genes were found to have significant variation at the transcriptional level. Within this subset, 21 were up-regulated and 16 were down-regulated in plants with CVC. The main functional categories of the down-regulated transcripts in plants with CVC were associated with metabolism, protein modification, energy and transport facilitation. The majority of the up-regulated transcripts were associated with metabolism and defense response. Some transcripts associated with adaptation to stress conditions were up-regulated in plants with CVC and could explain why plants remain alive even under severe water and nutritional stress. Others of the up-regulated transcripts are related to defense response suggesting that sweet orange plants activate their defense machinery. The genes associated with stress response might be expressed as part of a secondary response related to physiological alterations caused by the infection. |
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Genetics and Molecular Biology |
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Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosasweet orangeESTCVCcompatible interactionIn order to understand the genetic responses resulting from physiological changes that occur in plants displaying citrus variegated chlorosis (CVC) symptoms, we adopted a strategy of comparing two EST libraries from sweet orange [Citrus sinensis (L.) Osbeck]. One of them was prepared with plants showing typical CVC symptoms caused by Xylella fastidiosa and the other with non-inoculated plants. We obtained 15,944 ESTs by sequencing the two cDNA libraries. Using an in silico hybridization strategy, 37 genes were found to have significant variation at the transcriptional level. Within this subset, 21 were up-regulated and 16 were down-regulated in plants with CVC. The main functional categories of the down-regulated transcripts in plants with CVC were associated with metabolism, protein modification, energy and transport facilitation. The majority of the up-regulated transcripts were associated with metabolism and defense response. Some transcripts associated with adaptation to stress conditions were up-regulated in plants with CVC and could explain why plants remain alive even under severe water and nutritional stress. Others of the up-regulated transcripts are related to defense response suggesting that sweet orange plants activate their defense machinery. The genes associated with stress response might be expressed as part of a secondary response related to physiological alterations caused by the infection.Sociedade Brasileira de Genética2007-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000500023Genetics and Molecular Biology v.30 n.3 suppl.0 2007reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572007000500023info:eu-repo/semantics/openAccessSouza,Alessandra A. deTakita,Marco A.Coletta-Filho,Helvécio D.Targon,Maria Luisa P.N.Carlos,Eduardo F.Locali-Fabris,Eliane C.Amaral,Alexandre M.Freitas-Astúa,JulianaSilva-Pinhati,Ana Carla O.Boscariol-Camargo,Raquel L.Berger,Irving J.Rodrigues,Carolina M.Reis,Marcelo S.Machado,Marcos A.eng2007-11-06T00:00:00Zoai:scielo:S1415-47572007000500023Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2007-11-06T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false |
dc.title.none.fl_str_mv |
Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa |
title |
Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa |
spellingShingle |
Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa Souza,Alessandra A. de sweet orange EST CVC compatible interaction |
title_short |
Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa |
title_full |
Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa |
title_fullStr |
Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa |
title_full_unstemmed |
Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa |
title_sort |
Analysis of expressed sequence tags from Citrus sinensis L. Osbeck infected with Xylella fastidiosa |
author |
Souza,Alessandra A. de |
author_facet |
Souza,Alessandra A. de Takita,Marco A. Coletta-Filho,Helvécio D. Targon,Maria Luisa P.N. Carlos,Eduardo F. Locali-Fabris,Eliane C. Amaral,Alexandre M. Freitas-Astúa,Juliana Silva-Pinhati,Ana Carla O. Boscariol-Camargo,Raquel L. Berger,Irving J. Rodrigues,Carolina M. Reis,Marcelo S. Machado,Marcos A. |
author_role |
author |
author2 |
Takita,Marco A. Coletta-Filho,Helvécio D. Targon,Maria Luisa P.N. Carlos,Eduardo F. Locali-Fabris,Eliane C. Amaral,Alexandre M. Freitas-Astúa,Juliana Silva-Pinhati,Ana Carla O. Boscariol-Camargo,Raquel L. Berger,Irving J. Rodrigues,Carolina M. Reis,Marcelo S. Machado,Marcos A. |
author2_role |
author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Souza,Alessandra A. de Takita,Marco A. Coletta-Filho,Helvécio D. Targon,Maria Luisa P.N. Carlos,Eduardo F. Locali-Fabris,Eliane C. Amaral,Alexandre M. Freitas-Astúa,Juliana Silva-Pinhati,Ana Carla O. Boscariol-Camargo,Raquel L. Berger,Irving J. Rodrigues,Carolina M. Reis,Marcelo S. Machado,Marcos A. |
dc.subject.por.fl_str_mv |
sweet orange EST CVC compatible interaction |
topic |
sweet orange EST CVC compatible interaction |
description |
In order to understand the genetic responses resulting from physiological changes that occur in plants displaying citrus variegated chlorosis (CVC) symptoms, we adopted a strategy of comparing two EST libraries from sweet orange [Citrus sinensis (L.) Osbeck]. One of them was prepared with plants showing typical CVC symptoms caused by Xylella fastidiosa and the other with non-inoculated plants. We obtained 15,944 ESTs by sequencing the two cDNA libraries. Using an in silico hybridization strategy, 37 genes were found to have significant variation at the transcriptional level. Within this subset, 21 were up-regulated and 16 were down-regulated in plants with CVC. The main functional categories of the down-regulated transcripts in plants with CVC were associated with metabolism, protein modification, energy and transport facilitation. The majority of the up-regulated transcripts were associated with metabolism and defense response. Some transcripts associated with adaptation to stress conditions were up-regulated in plants with CVC and could explain why plants remain alive even under severe water and nutritional stress. Others of the up-regulated transcripts are related to defense response suggesting that sweet orange plants activate their defense machinery. The genes associated with stress response might be expressed as part of a secondary response related to physiological alterations caused by the infection. |
publishDate |
2007 |
dc.date.none.fl_str_mv |
2007-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000500023 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572007000500023 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S1415-47572007000500023 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
Genetics and Molecular Biology v.30 n.3 suppl.0 2007 reponame:Genetics and Molecular Biology instname:Sociedade Brasileira de Genética (SBG) instacron:SBG |
instname_str |
Sociedade Brasileira de Genética (SBG) |
instacron_str |
SBG |
institution |
SBG |
reponame_str |
Genetics and Molecular Biology |
collection |
Genetics and Molecular Biology |
repository.name.fl_str_mv |
Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG) |
repository.mail.fl_str_mv |
||editor@gmb.org.br |
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1752122380743868416 |