Genetic diversity of Hypostomus ancistroides (Teleostei, Loricariidae) from an urban stream

Detalhes bibliográficos
Autor(a) principal: Sofia,Silvia H.
Data de Publicação: 2008
Outros Autores: Galindo,Bruno A., Paula,Francine M., Sodré,Leda M.K., Martinez,Cláudia B.R.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000200027
Resumo: In this study, random amplified polymorphic DNA (RAPD) markers were applied to analyze the genetic diversity of samples of the Neotropical catfish Hypostomus ancistroides, collected from four sites (S1, S2, S3 and S4) along an urban stream in Southern Brazil. The 11 primers used in RAPD analysis amplified 147 loci, 76 (51.7%) of which were polymorphic. The proportions of polymorphic loci observed in the four samples were: 29.93% (S1), 31.97% (S2), 23.81% (S3) and 38.77% (S4). The average heterozygosity within sampling localities ranged from 0.1230 to 0.1526 and unbiased genetic distances ranged from 0.0253 to 0.0445. AMOVA partitioned 90.85% of the total variation within samples and 9.15% among samples. Excepting for the sample pair S1-S2 (phiST = 0.02784; p > 0.05), all others pairwise phiST values were significantly greater than zero, indicating moderate genetic differentiation among catfish samples from four localities. The relative low levels of genetic variation detected in all groups studied could be related to different factors, including the sedentary habit of these fish, which can be eroding the genetic variation of H. ancistroides from each locality.
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spelling Genetic diversity of Hypostomus ancistroides (Teleostei, Loricariidae) from an urban streamLoricariid fishgenetic diversityRAPDSiluriformesIn this study, random amplified polymorphic DNA (RAPD) markers were applied to analyze the genetic diversity of samples of the Neotropical catfish Hypostomus ancistroides, collected from four sites (S1, S2, S3 and S4) along an urban stream in Southern Brazil. The 11 primers used in RAPD analysis amplified 147 loci, 76 (51.7%) of which were polymorphic. The proportions of polymorphic loci observed in the four samples were: 29.93% (S1), 31.97% (S2), 23.81% (S3) and 38.77% (S4). The average heterozygosity within sampling localities ranged from 0.1230 to 0.1526 and unbiased genetic distances ranged from 0.0253 to 0.0445. AMOVA partitioned 90.85% of the total variation within samples and 9.15% among samples. Excepting for the sample pair S1-S2 (phiST = 0.02784; p > 0.05), all others pairwise phiST values were significantly greater than zero, indicating moderate genetic differentiation among catfish samples from four localities. The relative low levels of genetic variation detected in all groups studied could be related to different factors, including the sedentary habit of these fish, which can be eroding the genetic variation of H. ancistroides from each locality.Sociedade Brasileira de Genética2008-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000200027Genetics and Molecular Biology v.31 n.1 suppl.0 2008reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572008000200027info:eu-repo/semantics/openAccessSofia,Silvia H.Galindo,Bruno A.Paula,Francine M.Sodré,Leda M.K.Martinez,Cláudia B.R.eng2008-06-03T00:00:00Zoai:scielo:S1415-47572008000200027Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2008-06-03T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Genetic diversity of Hypostomus ancistroides (Teleostei, Loricariidae) from an urban stream
title Genetic diversity of Hypostomus ancistroides (Teleostei, Loricariidae) from an urban stream
spellingShingle Genetic diversity of Hypostomus ancistroides (Teleostei, Loricariidae) from an urban stream
Sofia,Silvia H.
Loricariid fish
genetic diversity
RAPD
Siluriformes
title_short Genetic diversity of Hypostomus ancistroides (Teleostei, Loricariidae) from an urban stream
title_full Genetic diversity of Hypostomus ancistroides (Teleostei, Loricariidae) from an urban stream
title_fullStr Genetic diversity of Hypostomus ancistroides (Teleostei, Loricariidae) from an urban stream
title_full_unstemmed Genetic diversity of Hypostomus ancistroides (Teleostei, Loricariidae) from an urban stream
title_sort Genetic diversity of Hypostomus ancistroides (Teleostei, Loricariidae) from an urban stream
author Sofia,Silvia H.
author_facet Sofia,Silvia H.
Galindo,Bruno A.
Paula,Francine M.
Sodré,Leda M.K.
Martinez,Cláudia B.R.
author_role author
author2 Galindo,Bruno A.
Paula,Francine M.
Sodré,Leda M.K.
Martinez,Cláudia B.R.
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Sofia,Silvia H.
Galindo,Bruno A.
Paula,Francine M.
Sodré,Leda M.K.
Martinez,Cláudia B.R.
dc.subject.por.fl_str_mv Loricariid fish
genetic diversity
RAPD
Siluriformes
topic Loricariid fish
genetic diversity
RAPD
Siluriformes
description In this study, random amplified polymorphic DNA (RAPD) markers were applied to analyze the genetic diversity of samples of the Neotropical catfish Hypostomus ancistroides, collected from four sites (S1, S2, S3 and S4) along an urban stream in Southern Brazil. The 11 primers used in RAPD analysis amplified 147 loci, 76 (51.7%) of which were polymorphic. The proportions of polymorphic loci observed in the four samples were: 29.93% (S1), 31.97% (S2), 23.81% (S3) and 38.77% (S4). The average heterozygosity within sampling localities ranged from 0.1230 to 0.1526 and unbiased genetic distances ranged from 0.0253 to 0.0445. AMOVA partitioned 90.85% of the total variation within samples and 9.15% among samples. Excepting for the sample pair S1-S2 (phiST = 0.02784; p > 0.05), all others pairwise phiST values were significantly greater than zero, indicating moderate genetic differentiation among catfish samples from four localities. The relative low levels of genetic variation detected in all groups studied could be related to different factors, including the sedentary habit of these fish, which can be eroding the genetic variation of H. ancistroides from each locality.
publishDate 2008
dc.date.none.fl_str_mv 2008-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000200027
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000200027
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572008000200027
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.31 n.1 suppl.0 2008
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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