DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Neotropical ichthyology (Online) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252013000300497 |
Resumo: | In the past years, DNA barcoding has emerged as a quick, accurate and efficient tool to identify species. Considering the difficulty in identifying some Parodontidae species from the La Plata basin and the absence of molecular data for the group, we aimed to test the effectiveness of DNA barcoding and discuss the importance of using different approaches to solve taxonomic problems. Eight species were analyzed with partial sequences of Cytochrome c oxidase I. The mean intraspecific K2P genetic distance was 0.04% compared to 4.2% for mean interspecific K2P genetic distance. The analyses of distance showed two pairs of species with K2P genetic divergence lower than 2%, but enough to separate these species. Apareiodon sp. and A. ibitiensis, considered as the same species by some authors, showed 4.2% genetic divergence, reinforcing their are different species. Samples of A. affinis from the Uruguay and Paraguay rivers presented 0.3% genetic divergence, indicating a close relationship between them. However, these samples diverged 6.1% from the samples of the upper Paraná River, indicating that the latter represents a potentially new species. The results showed the effectiveness of the DNA barcoding method in identifying the analyzed species, which, together with the morphological and cytogenetic available data, help species identification. |
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Neotropical ichthyology (Online) |
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DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problemsApareiodonCOI geneCytogeneticsFish identificationMorphologyIn the past years, DNA barcoding has emerged as a quick, accurate and efficient tool to identify species. Considering the difficulty in identifying some Parodontidae species from the La Plata basin and the absence of molecular data for the group, we aimed to test the effectiveness of DNA barcoding and discuss the importance of using different approaches to solve taxonomic problems. Eight species were analyzed with partial sequences of Cytochrome c oxidase I. The mean intraspecific K2P genetic distance was 0.04% compared to 4.2% for mean interspecific K2P genetic distance. The analyses of distance showed two pairs of species with K2P genetic divergence lower than 2%, but enough to separate these species. Apareiodon sp. and A. ibitiensis, considered as the same species by some authors, showed 4.2% genetic divergence, reinforcing their are different species. Samples of A. affinis from the Uruguay and Paraguay rivers presented 0.3% genetic divergence, indicating a close relationship between them. However, these samples diverged 6.1% from the samples of the upper Paraná River, indicating that the latter represents a potentially new species. The results showed the effectiveness of the DNA barcoding method in identifying the analyzed species, which, together with the morphological and cytogenetic available data, help species identification.Sociedade Brasileira de Ictiologia2013-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252013000300497Neotropical Ichthyology v.11 n.3 2013reponame:Neotropical ichthyology (Online)instname:Sociedade Brasileira de Ictiologia (SBI)instacron:SBI10.1590/S1679-62252013000300003info:eu-repo/semantics/openAccessBellafronte,ElisangelaMariguela,Tatiane CasagrandePereira,Luiz Henrique GarciaOliveira,ClaudioMoreira-Filho,Orlandoeng2015-10-09T00:00:00Zoai:scielo:S1679-62252013000300497Revistahttp://www.ufrgs.br/ni/https://old.scielo.br/oai/scielo-oai.php||neoichth@nupelia.uem.br1982-02241679-6225opendoar:2015-10-09T00:00Neotropical ichthyology (Online) - Sociedade Brasileira de Ictiologia (SBI)false |
dc.title.none.fl_str_mv |
DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems |
title |
DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems |
spellingShingle |
DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems Bellafronte,Elisangela Apareiodon COI gene Cytogenetics Fish identification Morphology |
title_short |
DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems |
title_full |
DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems |
title_fullStr |
DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems |
title_full_unstemmed |
DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems |
title_sort |
DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems |
author |
Bellafronte,Elisangela |
author_facet |
Bellafronte,Elisangela Mariguela,Tatiane Casagrande Pereira,Luiz Henrique Garcia Oliveira,Claudio Moreira-Filho,Orlando |
author_role |
author |
author2 |
Mariguela,Tatiane Casagrande Pereira,Luiz Henrique Garcia Oliveira,Claudio Moreira-Filho,Orlando |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Bellafronte,Elisangela Mariguela,Tatiane Casagrande Pereira,Luiz Henrique Garcia Oliveira,Claudio Moreira-Filho,Orlando |
dc.subject.por.fl_str_mv |
Apareiodon COI gene Cytogenetics Fish identification Morphology |
topic |
Apareiodon COI gene Cytogenetics Fish identification Morphology |
description |
In the past years, DNA barcoding has emerged as a quick, accurate and efficient tool to identify species. Considering the difficulty in identifying some Parodontidae species from the La Plata basin and the absence of molecular data for the group, we aimed to test the effectiveness of DNA barcoding and discuss the importance of using different approaches to solve taxonomic problems. Eight species were analyzed with partial sequences of Cytochrome c oxidase I. The mean intraspecific K2P genetic distance was 0.04% compared to 4.2% for mean interspecific K2P genetic distance. The analyses of distance showed two pairs of species with K2P genetic divergence lower than 2%, but enough to separate these species. Apareiodon sp. and A. ibitiensis, considered as the same species by some authors, showed 4.2% genetic divergence, reinforcing their are different species. Samples of A. affinis from the Uruguay and Paraguay rivers presented 0.3% genetic divergence, indicating a close relationship between them. However, these samples diverged 6.1% from the samples of the upper Paraná River, indicating that the latter represents a potentially new species. The results showed the effectiveness of the DNA barcoding method in identifying the analyzed species, which, together with the morphological and cytogenetic available data, help species identification. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013-09-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252013000300497 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252013000300497 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S1679-62252013000300003 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Ictiologia |
publisher.none.fl_str_mv |
Sociedade Brasileira de Ictiologia |
dc.source.none.fl_str_mv |
Neotropical Ichthyology v.11 n.3 2013 reponame:Neotropical ichthyology (Online) instname:Sociedade Brasileira de Ictiologia (SBI) instacron:SBI |
instname_str |
Sociedade Brasileira de Ictiologia (SBI) |
instacron_str |
SBI |
institution |
SBI |
reponame_str |
Neotropical ichthyology (Online) |
collection |
Neotropical ichthyology (Online) |
repository.name.fl_str_mv |
Neotropical ichthyology (Online) - Sociedade Brasileira de Ictiologia (SBI) |
repository.mail.fl_str_mv |
||neoichth@nupelia.uem.br |
_version_ |
1752122180846485504 |