DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems

Detalhes bibliográficos
Autor(a) principal: Bellafronte,Elisangela
Data de Publicação: 2013
Outros Autores: Mariguela,Tatiane Casagrande, Pereira,Luiz Henrique Garcia, Oliveira,Claudio, Moreira-Filho,Orlando
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Neotropical ichthyology (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252013000300497
Resumo: In the past years, DNA barcoding has emerged as a quick, accurate and efficient tool to identify species. Considering the difficulty in identifying some Parodontidae species from the La Plata basin and the absence of molecular data for the group, we aimed to test the effectiveness of DNA barcoding and discuss the importance of using different approaches to solve taxonomic problems. Eight species were analyzed with partial sequences of Cytochrome c oxidase I. The mean intraspecific K2P genetic distance was 0.04% compared to 4.2% for mean interspecific K2P genetic distance. The analyses of distance showed two pairs of species with K2P genetic divergence lower than 2%, but enough to separate these species. Apareiodon sp. and A. ibitiensis, considered as the same species by some authors, showed 4.2% genetic divergence, reinforcing their are different species. Samples of A. affinis from the Uruguay and Paraguay rivers presented 0.3% genetic divergence, indicating a close relationship between them. However, these samples diverged 6.1% from the samples of the upper Paraná River, indicating that the latter represents a potentially new species. The results showed the effectiveness of the DNA barcoding method in identifying the analyzed species, which, together with the morphological and cytogenetic available data, help species identification.
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spelling DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problemsApareiodonCOI geneCytogeneticsFish identificationMorphologyIn the past years, DNA barcoding has emerged as a quick, accurate and efficient tool to identify species. Considering the difficulty in identifying some Parodontidae species from the La Plata basin and the absence of molecular data for the group, we aimed to test the effectiveness of DNA barcoding and discuss the importance of using different approaches to solve taxonomic problems. Eight species were analyzed with partial sequences of Cytochrome c oxidase I. The mean intraspecific K2P genetic distance was 0.04% compared to 4.2% for mean interspecific K2P genetic distance. The analyses of distance showed two pairs of species with K2P genetic divergence lower than 2%, but enough to separate these species. Apareiodon sp. and A. ibitiensis, considered as the same species by some authors, showed 4.2% genetic divergence, reinforcing their are different species. Samples of A. affinis from the Uruguay and Paraguay rivers presented 0.3% genetic divergence, indicating a close relationship between them. However, these samples diverged 6.1% from the samples of the upper Paraná River, indicating that the latter represents a potentially new species. The results showed the effectiveness of the DNA barcoding method in identifying the analyzed species, which, together with the morphological and cytogenetic available data, help species identification.Sociedade Brasileira de Ictiologia2013-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252013000300497Neotropical Ichthyology v.11 n.3 2013reponame:Neotropical ichthyology (Online)instname:Sociedade Brasileira de Ictiologia (SBI)instacron:SBI10.1590/S1679-62252013000300003info:eu-repo/semantics/openAccessBellafronte,ElisangelaMariguela,Tatiane CasagrandePereira,Luiz Henrique GarciaOliveira,ClaudioMoreira-Filho,Orlandoeng2015-10-09T00:00:00Zoai:scielo:S1679-62252013000300497Revistahttp://www.ufrgs.br/ni/https://old.scielo.br/oai/scielo-oai.php||neoichth@nupelia.uem.br1982-02241679-6225opendoar:2015-10-09T00:00Neotropical ichthyology (Online) - Sociedade Brasileira de Ictiologia (SBI)false
dc.title.none.fl_str_mv DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems
title DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems
spellingShingle DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems
Bellafronte,Elisangela
Apareiodon
COI gene
Cytogenetics
Fish identification
Morphology
title_short DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems
title_full DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems
title_fullStr DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems
title_full_unstemmed DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems
title_sort DNA barcode of Parodontidae species from the La Plata river basin - applying new data to clarify taxonomic problems
author Bellafronte,Elisangela
author_facet Bellafronte,Elisangela
Mariguela,Tatiane Casagrande
Pereira,Luiz Henrique Garcia
Oliveira,Claudio
Moreira-Filho,Orlando
author_role author
author2 Mariguela,Tatiane Casagrande
Pereira,Luiz Henrique Garcia
Oliveira,Claudio
Moreira-Filho,Orlando
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Bellafronte,Elisangela
Mariguela,Tatiane Casagrande
Pereira,Luiz Henrique Garcia
Oliveira,Claudio
Moreira-Filho,Orlando
dc.subject.por.fl_str_mv Apareiodon
COI gene
Cytogenetics
Fish identification
Morphology
topic Apareiodon
COI gene
Cytogenetics
Fish identification
Morphology
description In the past years, DNA barcoding has emerged as a quick, accurate and efficient tool to identify species. Considering the difficulty in identifying some Parodontidae species from the La Plata basin and the absence of molecular data for the group, we aimed to test the effectiveness of DNA barcoding and discuss the importance of using different approaches to solve taxonomic problems. Eight species were analyzed with partial sequences of Cytochrome c oxidase I. The mean intraspecific K2P genetic distance was 0.04% compared to 4.2% for mean interspecific K2P genetic distance. The analyses of distance showed two pairs of species with K2P genetic divergence lower than 2%, but enough to separate these species. Apareiodon sp. and A. ibitiensis, considered as the same species by some authors, showed 4.2% genetic divergence, reinforcing their are different species. Samples of A. affinis from the Uruguay and Paraguay rivers presented 0.3% genetic divergence, indicating a close relationship between them. However, these samples diverged 6.1% from the samples of the upper Paraná River, indicating that the latter represents a potentially new species. The results showed the effectiveness of the DNA barcoding method in identifying the analyzed species, which, together with the morphological and cytogenetic available data, help species identification.
publishDate 2013
dc.date.none.fl_str_mv 2013-09-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252013000300497
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252013000300497
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1679-62252013000300003
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Ictiologia
publisher.none.fl_str_mv Sociedade Brasileira de Ictiologia
dc.source.none.fl_str_mv Neotropical Ichthyology v.11 n.3 2013
reponame:Neotropical ichthyology (Online)
instname:Sociedade Brasileira de Ictiologia (SBI)
instacron:SBI
instname_str Sociedade Brasileira de Ictiologia (SBI)
instacron_str SBI
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reponame_str Neotropical ichthyology (Online)
collection Neotropical ichthyology (Online)
repository.name.fl_str_mv Neotropical ichthyology (Online) - Sociedade Brasileira de Ictiologia (SBI)
repository.mail.fl_str_mv ||neoichth@nupelia.uem.br
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