Recommendations for the detection of Leptospira in urine by PCR

Detalhes bibliográficos
Autor(a) principal: Lucchesi,Paula M.A.
Data de Publicação: 2004
Outros Autores: Arroyo,Guillermo H., Etcheverría,Analía I., Parma,Alberto E., Seijo,Alfredo C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista da Sociedade Brasileira de Medicina Tropical
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0037-86822004000200003
Resumo: In the present study PCR was applied to detect leptospires in human urine. Several approaches for sample processing were evaluated to optimize the detection of leptospires in urine mixed with this bacterium. Furthermore, some changes in the composition of the reaction mix were studied. No amplification was observed in acidic urine, therefore neutralization of the sample immediately after collection is strongly recommended. PBS gave better results than Tris or NaOH as neutralizing reagents. Freezing and thawing of samples before processing yielded negative results. Elimination of epithelial cells, leukocytes and crystals by centrifugation at 3,000 rpm at room temperature increased sensitivity. In addition, both the washing step after collecting leptospires by centrifugation and the inclusion of 0.1% bovine serum albumin in the reaction mix minimized the interference of other inhibitory compounds. These modifications were useful to improve the detection of Leptospira in urine by PCR.
id SBMT-1_36ffcdf528d67a2e96eef2098fca461f
oai_identifier_str oai:scielo:S0037-86822004000200003
network_acronym_str SBMT-1
network_name_str Revista da Sociedade Brasileira de Medicina Tropical
repository_id_str
spelling Recommendations for the detection of Leptospira in urine by PCRLeptospiraPCRUrinePCR inhibitorsHumanIn the present study PCR was applied to detect leptospires in human urine. Several approaches for sample processing were evaluated to optimize the detection of leptospires in urine mixed with this bacterium. Furthermore, some changes in the composition of the reaction mix were studied. No amplification was observed in acidic urine, therefore neutralization of the sample immediately after collection is strongly recommended. PBS gave better results than Tris or NaOH as neutralizing reagents. Freezing and thawing of samples before processing yielded negative results. Elimination of epithelial cells, leukocytes and crystals by centrifugation at 3,000 rpm at room temperature increased sensitivity. In addition, both the washing step after collecting leptospires by centrifugation and the inclusion of 0.1% bovine serum albumin in the reaction mix minimized the interference of other inhibitory compounds. These modifications were useful to improve the detection of Leptospira in urine by PCR.Sociedade Brasileira de Medicina Tropical - SBMT2004-03-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0037-86822004000200003Revista da Sociedade Brasileira de Medicina Tropical v.37 n.2 2004reponame:Revista da Sociedade Brasileira de Medicina Tropicalinstname:Sociedade Brasileira de Medicina Tropical (SBMT)instacron:SBMT10.1590/S0037-86822004000200003info:eu-repo/semantics/openAccessLucchesi,Paula M.A.Arroyo,Guillermo H.Etcheverría,Analía I.Parma,Alberto E.Seijo,Alfredo C.eng2004-04-12T00:00:00Zoai:scielo:S0037-86822004000200003Revistahttps://www.sbmt.org.br/portal/revista/ONGhttps://old.scielo.br/oai/scielo-oai.php||dalmo@rsbmt.uftm.edu.br|| rsbmt@rsbmt.uftm.edu.br1678-98490037-8682opendoar:2004-04-12T00:00Revista da Sociedade Brasileira de Medicina Tropical - Sociedade Brasileira de Medicina Tropical (SBMT)false
dc.title.none.fl_str_mv Recommendations for the detection of Leptospira in urine by PCR
title Recommendations for the detection of Leptospira in urine by PCR
spellingShingle Recommendations for the detection of Leptospira in urine by PCR
Lucchesi,Paula M.A.
Leptospira
PCR
Urine
PCR inhibitors
Human
title_short Recommendations for the detection of Leptospira in urine by PCR
title_full Recommendations for the detection of Leptospira in urine by PCR
title_fullStr Recommendations for the detection of Leptospira in urine by PCR
title_full_unstemmed Recommendations for the detection of Leptospira in urine by PCR
title_sort Recommendations for the detection of Leptospira in urine by PCR
author Lucchesi,Paula M.A.
author_facet Lucchesi,Paula M.A.
Arroyo,Guillermo H.
Etcheverría,Analía I.
Parma,Alberto E.
Seijo,Alfredo C.
author_role author
author2 Arroyo,Guillermo H.
Etcheverría,Analía I.
Parma,Alberto E.
Seijo,Alfredo C.
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Lucchesi,Paula M.A.
Arroyo,Guillermo H.
Etcheverría,Analía I.
Parma,Alberto E.
Seijo,Alfredo C.
dc.subject.por.fl_str_mv Leptospira
PCR
Urine
PCR inhibitors
Human
topic Leptospira
PCR
Urine
PCR inhibitors
Human
description In the present study PCR was applied to detect leptospires in human urine. Several approaches for sample processing were evaluated to optimize the detection of leptospires in urine mixed with this bacterium. Furthermore, some changes in the composition of the reaction mix were studied. No amplification was observed in acidic urine, therefore neutralization of the sample immediately after collection is strongly recommended. PBS gave better results than Tris or NaOH as neutralizing reagents. Freezing and thawing of samples before processing yielded negative results. Elimination of epithelial cells, leukocytes and crystals by centrifugation at 3,000 rpm at room temperature increased sensitivity. In addition, both the washing step after collecting leptospires by centrifugation and the inclusion of 0.1% bovine serum albumin in the reaction mix minimized the interference of other inhibitory compounds. These modifications were useful to improve the detection of Leptospira in urine by PCR.
publishDate 2004
dc.date.none.fl_str_mv 2004-03-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0037-86822004000200003
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0037-86822004000200003
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0037-86822004000200003
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Medicina Tropical - SBMT
publisher.none.fl_str_mv Sociedade Brasileira de Medicina Tropical - SBMT
dc.source.none.fl_str_mv Revista da Sociedade Brasileira de Medicina Tropical v.37 n.2 2004
reponame:Revista da Sociedade Brasileira de Medicina Tropical
instname:Sociedade Brasileira de Medicina Tropical (SBMT)
instacron:SBMT
instname_str Sociedade Brasileira de Medicina Tropical (SBMT)
instacron_str SBMT
institution SBMT
reponame_str Revista da Sociedade Brasileira de Medicina Tropical
collection Revista da Sociedade Brasileira de Medicina Tropical
repository.name.fl_str_mv Revista da Sociedade Brasileira de Medicina Tropical - Sociedade Brasileira de Medicina Tropical (SBMT)
repository.mail.fl_str_mv ||dalmo@rsbmt.uftm.edu.br|| rsbmt@rsbmt.uftm.edu.br
_version_ 1752122152504524800