Synthesis, Characterization and Preliminary Study on Acetylpyrazine N(4)Butylthiosemicarbazone as a Potential CDK2 Inhibitor Combined with DFT Calculations

Detalhes bibliográficos
Autor(a) principal: Normaya,Erna
Data de Publicação: 2018
Outros Autores: Ahmad,Mohammad N., Farina,Yang, Bulat,Ku H. K.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Journal of the Brazilian Chemical Society (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532018001002197
Resumo: In this study, a new thiosemicarbazone ligand, namely acetylpyrazine N(4)butylthiosemicarbazone (APBT), was synthesized and characterized using 1H and 13C nuclear magnetic resonance (NMR) and Fourier transform infrared (FTIR) spectroscopies. Quantum chemical calculations were performed using density functional theory at the B3LYP/6-311++G(d,p) basis set level. The optimized molecular geometry of APBT is discussed based on X-ray structural reports from the literature. The assignment of the vibrational frequencies was done based on a potential energy distribution analysis using the vibrational energy distribution analysis (VEDA) 4 software. The energy gap between the highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) was evaluated to study the reactivity and stability of the compound. Global chemical reactivity and local reactivity descriptors of reactants and the product (APBT) were calculated to study the reaction mechanism. The region of interaction during the reaction to form APBT was determined using molecular electrostatic potential analysis. Finally, a preliminary study of the title compound as a cyclin-dependent kinase (CDK) inhibitor was further evaluated by performing a docking calculation.
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spelling Synthesis, Characterization and Preliminary Study on Acetylpyrazine N(4)Butylthiosemicarbazone as a Potential CDK2 Inhibitor Combined with DFT CalculationsthiosemicarbazoneDFTglobal reactivity descriptorsCDK inhibitorIn this study, a new thiosemicarbazone ligand, namely acetylpyrazine N(4)butylthiosemicarbazone (APBT), was synthesized and characterized using 1H and 13C nuclear magnetic resonance (NMR) and Fourier transform infrared (FTIR) spectroscopies. Quantum chemical calculations were performed using density functional theory at the B3LYP/6-311++G(d,p) basis set level. The optimized molecular geometry of APBT is discussed based on X-ray structural reports from the literature. The assignment of the vibrational frequencies was done based on a potential energy distribution analysis using the vibrational energy distribution analysis (VEDA) 4 software. The energy gap between the highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) was evaluated to study the reactivity and stability of the compound. Global chemical reactivity and local reactivity descriptors of reactants and the product (APBT) were calculated to study the reaction mechanism. The region of interaction during the reaction to form APBT was determined using molecular electrostatic potential analysis. Finally, a preliminary study of the title compound as a cyclin-dependent kinase (CDK) inhibitor was further evaluated by performing a docking calculation.Sociedade Brasileira de Química2018-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532018001002197Journal of the Brazilian Chemical Society v.29 n.10 2018reponame:Journal of the Brazilian Chemical Society (Online)instname:Sociedade Brasileira de Química (SBQ)instacron:SBQ10.21577/0103-5053.20180097info:eu-repo/semantics/openAccessNormaya,ErnaAhmad,Mohammad N.Farina,YangBulat,Ku H. K.eng2018-09-21T00:00:00Zoai:scielo:S0103-50532018001002197Revistahttp://jbcs.sbq.org.brONGhttps://old.scielo.br/oai/scielo-oai.php||office@jbcs.sbq.org.br1678-47900103-5053opendoar:2018-09-21T00:00Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)false
dc.title.none.fl_str_mv Synthesis, Characterization and Preliminary Study on Acetylpyrazine N(4)Butylthiosemicarbazone as a Potential CDK2 Inhibitor Combined with DFT Calculations
title Synthesis, Characterization and Preliminary Study on Acetylpyrazine N(4)Butylthiosemicarbazone as a Potential CDK2 Inhibitor Combined with DFT Calculations
spellingShingle Synthesis, Characterization and Preliminary Study on Acetylpyrazine N(4)Butylthiosemicarbazone as a Potential CDK2 Inhibitor Combined with DFT Calculations
Normaya,Erna
thiosemicarbazone
DFT
global reactivity descriptors
CDK inhibitor
title_short Synthesis, Characterization and Preliminary Study on Acetylpyrazine N(4)Butylthiosemicarbazone as a Potential CDK2 Inhibitor Combined with DFT Calculations
title_full Synthesis, Characterization and Preliminary Study on Acetylpyrazine N(4)Butylthiosemicarbazone as a Potential CDK2 Inhibitor Combined with DFT Calculations
title_fullStr Synthesis, Characterization and Preliminary Study on Acetylpyrazine N(4)Butylthiosemicarbazone as a Potential CDK2 Inhibitor Combined with DFT Calculations
title_full_unstemmed Synthesis, Characterization and Preliminary Study on Acetylpyrazine N(4)Butylthiosemicarbazone as a Potential CDK2 Inhibitor Combined with DFT Calculations
title_sort Synthesis, Characterization and Preliminary Study on Acetylpyrazine N(4)Butylthiosemicarbazone as a Potential CDK2 Inhibitor Combined with DFT Calculations
author Normaya,Erna
author_facet Normaya,Erna
Ahmad,Mohammad N.
Farina,Yang
Bulat,Ku H. K.
author_role author
author2 Ahmad,Mohammad N.
Farina,Yang
Bulat,Ku H. K.
author2_role author
author
author
dc.contributor.author.fl_str_mv Normaya,Erna
Ahmad,Mohammad N.
Farina,Yang
Bulat,Ku H. K.
dc.subject.por.fl_str_mv thiosemicarbazone
DFT
global reactivity descriptors
CDK inhibitor
topic thiosemicarbazone
DFT
global reactivity descriptors
CDK inhibitor
description In this study, a new thiosemicarbazone ligand, namely acetylpyrazine N(4)butylthiosemicarbazone (APBT), was synthesized and characterized using 1H and 13C nuclear magnetic resonance (NMR) and Fourier transform infrared (FTIR) spectroscopies. Quantum chemical calculations were performed using density functional theory at the B3LYP/6-311++G(d,p) basis set level. The optimized molecular geometry of APBT is discussed based on X-ray structural reports from the literature. The assignment of the vibrational frequencies was done based on a potential energy distribution analysis using the vibrational energy distribution analysis (VEDA) 4 software. The energy gap between the highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) was evaluated to study the reactivity and stability of the compound. Global chemical reactivity and local reactivity descriptors of reactants and the product (APBT) were calculated to study the reaction mechanism. The region of interaction during the reaction to form APBT was determined using molecular electrostatic potential analysis. Finally, a preliminary study of the title compound as a cyclin-dependent kinase (CDK) inhibitor was further evaluated by performing a docking calculation.
publishDate 2018
dc.date.none.fl_str_mv 2018-10-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532018001002197
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532018001002197
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.21577/0103-5053.20180097
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Química
publisher.none.fl_str_mv Sociedade Brasileira de Química
dc.source.none.fl_str_mv Journal of the Brazilian Chemical Society v.29 n.10 2018
reponame:Journal of the Brazilian Chemical Society (Online)
instname:Sociedade Brasileira de Química (SBQ)
instacron:SBQ
instname_str Sociedade Brasileira de Química (SBQ)
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reponame_str Journal of the Brazilian Chemical Society (Online)
collection Journal of the Brazilian Chemical Society (Online)
repository.name.fl_str_mv Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)
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