Conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl] and its complex with benzaldehyde within metal-organic frameworks (MOFs)

Detalhes bibliográficos
Autor(a) principal: Braga,Claudia F.
Data de Publicação: 2008
Outros Autores: Longo,Ricardo L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Journal of the Brazilian Chemical Society (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532008000200019
Resumo: The conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl], denoted as cyclo-[(S)-Phe-(S)-His-H+], within a cavity of a new IRMOFs-phen (isoreticular metal-organic frameworks with a 2,7-dicarboxylate phenanthrene substituted bridges) porous material was performed with the AM1 quantum chemical method. Two forms of cyclo-[(S)-Phe-(S)-His-H+] were considered: the bound-form, where the peptide is chemically linked to the phenanthrene moiety and the unbound-form where the peptide is free within the cavity. The most probable conformers of cyclo-[(S)-Phe-(S)-His-H+] within the cavity have been compared to the conformers in gas phase and in water, simulated by the implicit solvent SM5.4 model. The preferred conformations within the IRMOF-phen cavity are the (g-, g+) and (t, g+) in contrast to the gas and aqueous phases. The environment within the cavity is also relevant, since the substitution of a hydrogen atom by CH3 (IRMOF-phen-CH3) or Br (IRMOF-phen-Br) lead to new IRMOFs-phen that changes drastically the conformer populations, as well as the adsorption site of the dipeptide. These results have important implications in controlling the stereoselectivity of reactions in the presence of chiral inductors. Indeed, this is the first time that a folded conformation of cyclo-[(S)-Phe-(S)-His-H+] was found, as well as an stable cyclo-[(S)-Phe-(S)-His-H+]-benzaldehyde complex was obtained using the ONIOM(PBE1:AM1) method. This complex is compatible with the proposed structure for the transition state of the hydrocyanation of benzaldehyde that explains the observed enantioselectivity.
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spelling Conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl] and its complex with benzaldehyde within metal-organic frameworks (MOFs)enantioselectivity conformationquantum chemistryconfined speciesThe conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl], denoted as cyclo-[(S)-Phe-(S)-His-H+], within a cavity of a new IRMOFs-phen (isoreticular metal-organic frameworks with a 2,7-dicarboxylate phenanthrene substituted bridges) porous material was performed with the AM1 quantum chemical method. Two forms of cyclo-[(S)-Phe-(S)-His-H+] were considered: the bound-form, where the peptide is chemically linked to the phenanthrene moiety and the unbound-form where the peptide is free within the cavity. The most probable conformers of cyclo-[(S)-Phe-(S)-His-H+] within the cavity have been compared to the conformers in gas phase and in water, simulated by the implicit solvent SM5.4 model. The preferred conformations within the IRMOF-phen cavity are the (g-, g+) and (t, g+) in contrast to the gas and aqueous phases. The environment within the cavity is also relevant, since the substitution of a hydrogen atom by CH3 (IRMOF-phen-CH3) or Br (IRMOF-phen-Br) lead to new IRMOFs-phen that changes drastically the conformer populations, as well as the adsorption site of the dipeptide. These results have important implications in controlling the stereoselectivity of reactions in the presence of chiral inductors. Indeed, this is the first time that a folded conformation of cyclo-[(S)-Phe-(S)-His-H+] was found, as well as an stable cyclo-[(S)-Phe-(S)-His-H+]-benzaldehyde complex was obtained using the ONIOM(PBE1:AM1) method. This complex is compatible with the proposed structure for the transition state of the hydrocyanation of benzaldehyde that explains the observed enantioselectivity.Sociedade Brasileira de Química2008-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532008000200019Journal of the Brazilian Chemical Society v.19 n.2 2008reponame:Journal of the Brazilian Chemical Society (Online)instname:Sociedade Brasileira de Química (SBQ)instacron:SBQ10.1590/S0103-50532008000200019info:eu-repo/semantics/openAccessBraga,Claudia F.Longo,Ricardo L.eng2008-04-08T00:00:00Zoai:scielo:S0103-50532008000200019Revistahttp://jbcs.sbq.org.brONGhttps://old.scielo.br/oai/scielo-oai.php||office@jbcs.sbq.org.br1678-47900103-5053opendoar:2008-04-08T00:00Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)false
dc.title.none.fl_str_mv Conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl] and its complex with benzaldehyde within metal-organic frameworks (MOFs)
title Conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl] and its complex with benzaldehyde within metal-organic frameworks (MOFs)
spellingShingle Conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl] and its complex with benzaldehyde within metal-organic frameworks (MOFs)
Braga,Claudia F.
enantioselectivity conformation
quantum chemistry
confined species
title_short Conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl] and its complex with benzaldehyde within metal-organic frameworks (MOFs)
title_full Conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl] and its complex with benzaldehyde within metal-organic frameworks (MOFs)
title_fullStr Conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl] and its complex with benzaldehyde within metal-organic frameworks (MOFs)
title_full_unstemmed Conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl] and its complex with benzaldehyde within metal-organic frameworks (MOFs)
title_sort Conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl] and its complex with benzaldehyde within metal-organic frameworks (MOFs)
author Braga,Claudia F.
author_facet Braga,Claudia F.
Longo,Ricardo L.
author_role author
author2 Longo,Ricardo L.
author2_role author
dc.contributor.author.fl_str_mv Braga,Claudia F.
Longo,Ricardo L.
dc.subject.por.fl_str_mv enantioselectivity conformation
quantum chemistry
confined species
topic enantioselectivity conformation
quantum chemistry
confined species
description The conformational analysis of protonated cyclo-[(S)-phenylalanyl-(S)-histidyl], denoted as cyclo-[(S)-Phe-(S)-His-H+], within a cavity of a new IRMOFs-phen (isoreticular metal-organic frameworks with a 2,7-dicarboxylate phenanthrene substituted bridges) porous material was performed with the AM1 quantum chemical method. Two forms of cyclo-[(S)-Phe-(S)-His-H+] were considered: the bound-form, where the peptide is chemically linked to the phenanthrene moiety and the unbound-form where the peptide is free within the cavity. The most probable conformers of cyclo-[(S)-Phe-(S)-His-H+] within the cavity have been compared to the conformers in gas phase and in water, simulated by the implicit solvent SM5.4 model. The preferred conformations within the IRMOF-phen cavity are the (g-, g+) and (t, g+) in contrast to the gas and aqueous phases. The environment within the cavity is also relevant, since the substitution of a hydrogen atom by CH3 (IRMOF-phen-CH3) or Br (IRMOF-phen-Br) lead to new IRMOFs-phen that changes drastically the conformer populations, as well as the adsorption site of the dipeptide. These results have important implications in controlling the stereoselectivity of reactions in the presence of chiral inductors. Indeed, this is the first time that a folded conformation of cyclo-[(S)-Phe-(S)-His-H+] was found, as well as an stable cyclo-[(S)-Phe-(S)-His-H+]-benzaldehyde complex was obtained using the ONIOM(PBE1:AM1) method. This complex is compatible with the proposed structure for the transition state of the hydrocyanation of benzaldehyde that explains the observed enantioselectivity.
publishDate 2008
dc.date.none.fl_str_mv 2008-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532008000200019
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532008000200019
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0103-50532008000200019
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv Sociedade Brasileira de Química
publisher.none.fl_str_mv Sociedade Brasileira de Química
dc.source.none.fl_str_mv Journal of the Brazilian Chemical Society v.19 n.2 2008
reponame:Journal of the Brazilian Chemical Society (Online)
instname:Sociedade Brasileira de Química (SBQ)
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instname_str Sociedade Brasileira de Química (SBQ)
instacron_str SBQ
institution SBQ
reponame_str Journal of the Brazilian Chemical Society (Online)
collection Journal of the Brazilian Chemical Society (Online)
repository.name.fl_str_mv Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)
repository.mail.fl_str_mv ||office@jbcs.sbq.org.br
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