Sparkle/PM3 for the modeling of europium(III), gadolinium(III), and terbium(III) complexes

Detalhes bibliográficos
Autor(a) principal: Freire,Ricardo O.
Data de Publicação: 2009
Outros Autores: Rocha,Gerd B., Simas,Alfredo M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Journal of the Brazilian Chemical Society (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532009000900011
Resumo: The Sparkle/PM3 model is extended to europium(III), gadolinium(III), and terbium(III) complexes. The validation procedure was carried out using only high quality crystallographic structures, for a total of ninety-six Eu(III) complexes, seventy Gd(III) complexes, and forty-two Tb(III) complexes. The Sparkle/PM3 unsigned mean error, for all interatomic distances between the trivalent lanthanide ion and the ligand atoms of the first sphere of coordination, is: 0.080 Å for Eu(III); 0.063 Å for Gd(III); and 0.070 Å for Tb(III). These figures are similar to the Sparkle/AM1 ones of 0.082 Å, 0.061 Å, and 0.068 Å respectively, indicating they are all comparable parameterizations. Moreover, their accuracy is similar to what can be obtained by present-day ab initio effective core potential full geometry optimization calculations on such lanthanide complexes. Finally, we report a preliminary attempt to show that Sparkle/PM3 geometry predictions are reliable. For one of the Eu(III) complexes, BAFZEO, we created hundreds of different input geometries by randomly varying the distances and angles of the ligands to the central Eu(III) ion, which were all subsequently fully optimized. A significant trend was unveiled, indicating that more accurate local minima geometries cluster at lower total energies, thus reinforcing the validity of sparkle model calculations.
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spelling Sparkle/PM3 for the modeling of europium(III), gadolinium(III), and terbium(III) complexesSparkle modelAM1PM3lanthanide complexesrare earth coordination compoundsThe Sparkle/PM3 model is extended to europium(III), gadolinium(III), and terbium(III) complexes. The validation procedure was carried out using only high quality crystallographic structures, for a total of ninety-six Eu(III) complexes, seventy Gd(III) complexes, and forty-two Tb(III) complexes. The Sparkle/PM3 unsigned mean error, for all interatomic distances between the trivalent lanthanide ion and the ligand atoms of the first sphere of coordination, is: 0.080 Å for Eu(III); 0.063 Å for Gd(III); and 0.070 Å for Tb(III). These figures are similar to the Sparkle/AM1 ones of 0.082 Å, 0.061 Å, and 0.068 Å respectively, indicating they are all comparable parameterizations. Moreover, their accuracy is similar to what can be obtained by present-day ab initio effective core potential full geometry optimization calculations on such lanthanide complexes. Finally, we report a preliminary attempt to show that Sparkle/PM3 geometry predictions are reliable. For one of the Eu(III) complexes, BAFZEO, we created hundreds of different input geometries by randomly varying the distances and angles of the ligands to the central Eu(III) ion, which were all subsequently fully optimized. A significant trend was unveiled, indicating that more accurate local minima geometries cluster at lower total energies, thus reinforcing the validity of sparkle model calculations.Sociedade Brasileira de Química2009-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532009000900011Journal of the Brazilian Chemical Society v.20 n.9 2009reponame:Journal of the Brazilian Chemical Society (Online)instname:Sociedade Brasileira de Química (SBQ)instacron:SBQ10.1590/S0103-50532009000900011info:eu-repo/semantics/openAccessFreire,Ricardo O.Rocha,Gerd B.Simas,Alfredo M.eng2011-10-14T00:00:00Zoai:scielo:S0103-50532009000900011Revistahttp://jbcs.sbq.org.brONGhttps://old.scielo.br/oai/scielo-oai.php||office@jbcs.sbq.org.br1678-47900103-5053opendoar:2011-10-14T00:00Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)false
dc.title.none.fl_str_mv Sparkle/PM3 for the modeling of europium(III), gadolinium(III), and terbium(III) complexes
title Sparkle/PM3 for the modeling of europium(III), gadolinium(III), and terbium(III) complexes
spellingShingle Sparkle/PM3 for the modeling of europium(III), gadolinium(III), and terbium(III) complexes
Freire,Ricardo O.
Sparkle model
AM1
PM3
lanthanide complexes
rare earth coordination compounds
title_short Sparkle/PM3 for the modeling of europium(III), gadolinium(III), and terbium(III) complexes
title_full Sparkle/PM3 for the modeling of europium(III), gadolinium(III), and terbium(III) complexes
title_fullStr Sparkle/PM3 for the modeling of europium(III), gadolinium(III), and terbium(III) complexes
title_full_unstemmed Sparkle/PM3 for the modeling of europium(III), gadolinium(III), and terbium(III) complexes
title_sort Sparkle/PM3 for the modeling of europium(III), gadolinium(III), and terbium(III) complexes
author Freire,Ricardo O.
author_facet Freire,Ricardo O.
Rocha,Gerd B.
Simas,Alfredo M.
author_role author
author2 Rocha,Gerd B.
Simas,Alfredo M.
author2_role author
author
dc.contributor.author.fl_str_mv Freire,Ricardo O.
Rocha,Gerd B.
Simas,Alfredo M.
dc.subject.por.fl_str_mv Sparkle model
AM1
PM3
lanthanide complexes
rare earth coordination compounds
topic Sparkle model
AM1
PM3
lanthanide complexes
rare earth coordination compounds
description The Sparkle/PM3 model is extended to europium(III), gadolinium(III), and terbium(III) complexes. The validation procedure was carried out using only high quality crystallographic structures, for a total of ninety-six Eu(III) complexes, seventy Gd(III) complexes, and forty-two Tb(III) complexes. The Sparkle/PM3 unsigned mean error, for all interatomic distances between the trivalent lanthanide ion and the ligand atoms of the first sphere of coordination, is: 0.080 Å for Eu(III); 0.063 Å for Gd(III); and 0.070 Å for Tb(III). These figures are similar to the Sparkle/AM1 ones of 0.082 Å, 0.061 Å, and 0.068 Å respectively, indicating they are all comparable parameterizations. Moreover, their accuracy is similar to what can be obtained by present-day ab initio effective core potential full geometry optimization calculations on such lanthanide complexes. Finally, we report a preliminary attempt to show that Sparkle/PM3 geometry predictions are reliable. For one of the Eu(III) complexes, BAFZEO, we created hundreds of different input geometries by randomly varying the distances and angles of the ligands to the central Eu(III) ion, which were all subsequently fully optimized. A significant trend was unveiled, indicating that more accurate local minima geometries cluster at lower total energies, thus reinforcing the validity of sparkle model calculations.
publishDate 2009
dc.date.none.fl_str_mv 2009-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532009000900011
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532009000900011
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0103-50532009000900011
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Química
publisher.none.fl_str_mv Sociedade Brasileira de Química
dc.source.none.fl_str_mv Journal of the Brazilian Chemical Society v.20 n.9 2009
reponame:Journal of the Brazilian Chemical Society (Online)
instname:Sociedade Brasileira de Química (SBQ)
instacron:SBQ
instname_str Sociedade Brasileira de Química (SBQ)
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institution SBQ
reponame_str Journal of the Brazilian Chemical Society (Online)
collection Journal of the Brazilian Chemical Society (Online)
repository.name.fl_str_mv Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)
repository.mail.fl_str_mv ||office@jbcs.sbq.org.br
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