Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry

Detalhes bibliográficos
Autor(a) principal: Angolini,Célio F. F.
Data de Publicação: 2015
Outros Autores: Pilau,Eduardo J., Lopes-Oliveira,Patrícia F., Garcia,Isabel N. S., Gozzo,Fábio C., Oliveira,Valéria M. de, Marsaioli,Anita J.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Journal of the Brazilian Chemical Society (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532015000300513
Resumo: Indigenous bacteria isolated from a crude oil sample from a deep water reservoir in the Pampo Sul Oilfield (Campos Basin-RJ, Brazil) were previously classified as strains of B. pumilus. However, their enzymatic activities with fluorogenic probes and rates of petroleum biodegradation were completely different. Some of the bacteria depleted n-alkanes, whereas others did not. Aromatic compounds reported to be recalcitrant were also biodegraded by some of these Bacillus strains, revealing their outstanding ability to deplete petroleum. Further classification using matrixassisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOF MS) followed by statistical analysis revealed that these strains could be clustered into three different groups, consistent with their enzymatic activity evaluation. A more accurate phylogenetic analysis using gyrB gene sequences confirmed the MALDI-TOF MS classification of three groups of strains and identified them as Bacillus safensis, B. cereus and B. thuringiensis.
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spelling Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometrypetroleum microorganismsBacillus sp.16S rRNAmicroorganisms identificationIndigenous bacteria isolated from a crude oil sample from a deep water reservoir in the Pampo Sul Oilfield (Campos Basin-RJ, Brazil) were previously classified as strains of B. pumilus. However, their enzymatic activities with fluorogenic probes and rates of petroleum biodegradation were completely different. Some of the bacteria depleted n-alkanes, whereas others did not. Aromatic compounds reported to be recalcitrant were also biodegraded by some of these Bacillus strains, revealing their outstanding ability to deplete petroleum. Further classification using matrixassisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOF MS) followed by statistical analysis revealed that these strains could be clustered into three different groups, consistent with their enzymatic activity evaluation. A more accurate phylogenetic analysis using gyrB gene sequences confirmed the MALDI-TOF MS classification of three groups of strains and identified them as Bacillus safensis, B. cereus and B. thuringiensis.Sociedade Brasileira de Química2015-03-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532015000300513Journal of the Brazilian Chemical Society v.26 n.3 2015reponame:Journal of the Brazilian Chemical Society (Online)instname:Sociedade Brasileira de Química (SBQ)instacron:SBQ10.5935/0103-5053.20150004info:eu-repo/semantics/openAccessAngolini,Célio F. F.Pilau,Eduardo J.Lopes-Oliveira,Patrícia F.Garcia,Isabel N. S.Gozzo,Fábio C.Oliveira,Valéria M. deMarsaioli,Anita J.eng2017-11-09T00:00:00Zoai:scielo:S0103-50532015000300513Revistahttp://jbcs.sbq.org.brONGhttps://old.scielo.br/oai/scielo-oai.php||office@jbcs.sbq.org.br1678-47900103-5053opendoar:2017-11-09T00:00Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)false
dc.title.none.fl_str_mv Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry
title Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry
spellingShingle Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry
Angolini,Célio F. F.
petroleum microorganisms
Bacillus sp.
16S rRNA
microorganisms identification
title_short Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry
title_full Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry
title_fullStr Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry
title_full_unstemmed Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry
title_sort Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry
author Angolini,Célio F. F.
author_facet Angolini,Célio F. F.
Pilau,Eduardo J.
Lopes-Oliveira,Patrícia F.
Garcia,Isabel N. S.
Gozzo,Fábio C.
Oliveira,Valéria M. de
Marsaioli,Anita J.
author_role author
author2 Pilau,Eduardo J.
Lopes-Oliveira,Patrícia F.
Garcia,Isabel N. S.
Gozzo,Fábio C.
Oliveira,Valéria M. de
Marsaioli,Anita J.
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Angolini,Célio F. F.
Pilau,Eduardo J.
Lopes-Oliveira,Patrícia F.
Garcia,Isabel N. S.
Gozzo,Fábio C.
Oliveira,Valéria M. de
Marsaioli,Anita J.
dc.subject.por.fl_str_mv petroleum microorganisms
Bacillus sp.
16S rRNA
microorganisms identification
topic petroleum microorganisms
Bacillus sp.
16S rRNA
microorganisms identification
description Indigenous bacteria isolated from a crude oil sample from a deep water reservoir in the Pampo Sul Oilfield (Campos Basin-RJ, Brazil) were previously classified as strains of B. pumilus. However, their enzymatic activities with fluorogenic probes and rates of petroleum biodegradation were completely different. Some of the bacteria depleted n-alkanes, whereas others did not. Aromatic compounds reported to be recalcitrant were also biodegraded by some of these Bacillus strains, revealing their outstanding ability to deplete petroleum. Further classification using matrixassisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOF MS) followed by statistical analysis revealed that these strains could be clustered into three different groups, consistent with their enzymatic activity evaluation. A more accurate phylogenetic analysis using gyrB gene sequences confirmed the MALDI-TOF MS classification of three groups of strains and identified them as Bacillus safensis, B. cereus and B. thuringiensis.
publishDate 2015
dc.date.none.fl_str_mv 2015-03-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532015000300513
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.5935/0103-5053.20150004
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Química
publisher.none.fl_str_mv Sociedade Brasileira de Química
dc.source.none.fl_str_mv Journal of the Brazilian Chemical Society v.26 n.3 2015
reponame:Journal of the Brazilian Chemical Society (Online)
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collection Journal of the Brazilian Chemical Society (Online)
repository.name.fl_str_mv Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)
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