Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Journal of the Brazilian Chemical Society (Online) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532015000300513 |
Resumo: | Indigenous bacteria isolated from a crude oil sample from a deep water reservoir in the Pampo Sul Oilfield (Campos Basin-RJ, Brazil) were previously classified as strains of B. pumilus. However, their enzymatic activities with fluorogenic probes and rates of petroleum biodegradation were completely different. Some of the bacteria depleted n-alkanes, whereas others did not. Aromatic compounds reported to be recalcitrant were also biodegraded by some of these Bacillus strains, revealing their outstanding ability to deplete petroleum. Further classification using matrixassisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOF MS) followed by statistical analysis revealed that these strains could be clustered into three different groups, consistent with their enzymatic activity evaluation. A more accurate phylogenetic analysis using gyrB gene sequences confirmed the MALDI-TOF MS classification of three groups of strains and identified them as Bacillus safensis, B. cereus and B. thuringiensis. |
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Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometrypetroleum microorganismsBacillus sp.16S rRNAmicroorganisms identificationIndigenous bacteria isolated from a crude oil sample from a deep water reservoir in the Pampo Sul Oilfield (Campos Basin-RJ, Brazil) were previously classified as strains of B. pumilus. However, their enzymatic activities with fluorogenic probes and rates of petroleum biodegradation were completely different. Some of the bacteria depleted n-alkanes, whereas others did not. Aromatic compounds reported to be recalcitrant were also biodegraded by some of these Bacillus strains, revealing their outstanding ability to deplete petroleum. Further classification using matrixassisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOF MS) followed by statistical analysis revealed that these strains could be clustered into three different groups, consistent with their enzymatic activity evaluation. A more accurate phylogenetic analysis using gyrB gene sequences confirmed the MALDI-TOF MS classification of three groups of strains and identified them as Bacillus safensis, B. cereus and B. thuringiensis.Sociedade Brasileira de Química2015-03-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532015000300513Journal of the Brazilian Chemical Society v.26 n.3 2015reponame:Journal of the Brazilian Chemical Society (Online)instname:Sociedade Brasileira de Química (SBQ)instacron:SBQ10.5935/0103-5053.20150004info:eu-repo/semantics/openAccessAngolini,Célio F. F.Pilau,Eduardo J.Lopes-Oliveira,Patrícia F.Garcia,Isabel N. S.Gozzo,Fábio C.Oliveira,Valéria M. deMarsaioli,Anita J.eng2017-11-09T00:00:00Zoai:scielo:S0103-50532015000300513Revistahttp://jbcs.sbq.org.brONGhttps://old.scielo.br/oai/scielo-oai.php||office@jbcs.sbq.org.br1678-47900103-5053opendoar:2017-11-09T00:00Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)false |
dc.title.none.fl_str_mv |
Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry |
title |
Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry |
spellingShingle |
Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry Angolini,Célio F. F. petroleum microorganisms Bacillus sp. 16S rRNA microorganisms identification |
title_short |
Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry |
title_full |
Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry |
title_fullStr |
Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry |
title_full_unstemmed |
Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry |
title_sort |
Classification and Identification of Petroleum Microorganisms by MALDI-TOF Mass Spectrometry |
author |
Angolini,Célio F. F. |
author_facet |
Angolini,Célio F. F. Pilau,Eduardo J. Lopes-Oliveira,Patrícia F. Garcia,Isabel N. S. Gozzo,Fábio C. Oliveira,Valéria M. de Marsaioli,Anita J. |
author_role |
author |
author2 |
Pilau,Eduardo J. Lopes-Oliveira,Patrícia F. Garcia,Isabel N. S. Gozzo,Fábio C. Oliveira,Valéria M. de Marsaioli,Anita J. |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Angolini,Célio F. F. Pilau,Eduardo J. Lopes-Oliveira,Patrícia F. Garcia,Isabel N. S. Gozzo,Fábio C. Oliveira,Valéria M. de Marsaioli,Anita J. |
dc.subject.por.fl_str_mv |
petroleum microorganisms Bacillus sp. 16S rRNA microorganisms identification |
topic |
petroleum microorganisms Bacillus sp. 16S rRNA microorganisms identification |
description |
Indigenous bacteria isolated from a crude oil sample from a deep water reservoir in the Pampo Sul Oilfield (Campos Basin-RJ, Brazil) were previously classified as strains of B. pumilus. However, their enzymatic activities with fluorogenic probes and rates of petroleum biodegradation were completely different. Some of the bacteria depleted n-alkanes, whereas others did not. Aromatic compounds reported to be recalcitrant were also biodegraded by some of these Bacillus strains, revealing their outstanding ability to deplete petroleum. Further classification using matrixassisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOF MS) followed by statistical analysis revealed that these strains could be clustered into three different groups, consistent with their enzymatic activity evaluation. A more accurate phylogenetic analysis using gyrB gene sequences confirmed the MALDI-TOF MS classification of three groups of strains and identified them as Bacillus safensis, B. cereus and B. thuringiensis. |
publishDate |
2015 |
dc.date.none.fl_str_mv |
2015-03-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532015000300513 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532015000300513 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.5935/0103-5053.20150004 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Química |
publisher.none.fl_str_mv |
Sociedade Brasileira de Química |
dc.source.none.fl_str_mv |
Journal of the Brazilian Chemical Society v.26 n.3 2015 reponame:Journal of the Brazilian Chemical Society (Online) instname:Sociedade Brasileira de Química (SBQ) instacron:SBQ |
instname_str |
Sociedade Brasileira de Química (SBQ) |
instacron_str |
SBQ |
institution |
SBQ |
reponame_str |
Journal of the Brazilian Chemical Society (Online) |
collection |
Journal of the Brazilian Chemical Society (Online) |
repository.name.fl_str_mv |
Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ) |
repository.mail.fl_str_mv |
||office@jbcs.sbq.org.br |
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1750318176997998592 |