Development and application of a test mixture for untargeted liquid chromatography-mass spectrometry analysis of urine samples

Detalhes bibliográficos
Autor(a) principal: Torres,Clarisse L
Data de Publicação: 2022
Outros Autores: Sardela,Vinicius F, Scalco,Fernanda B, Aquino Neto,Francisco R. de, Garrett,Rafael
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Química Nova (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-40422022000100089
Resumo: Metabolic profiling of complex biological matrices based on liquid chromatography-mass spectrometry (LC-MS) allows detecting a wide range of metabolites with distinct concentrations and physicochemical properties. Given the complexity of samples and the necessity of a comprehensive approach in untargeted metabolomics, quality control strategies are mandatory to obtain high-quality data. The LC-MS performance must be monitored and evaluated to guarantee data reliability. In this study, a test mixture (TM) was developed, systematically evaluated, and applied to untargeted metabolomics of urine samples from individuals suspected of inborn errors of metabolism. The TM was composed of fifteen analytes that eluted across the entire gradient in reversed-phase columns and ionized in positive/negative electrospray modes. It helped set the LC-MS conditions for urine analysis, from sample reconstitution solvent to selecting the MS ion source parameters. The TM quickly indicated column stationary phase degradation during the batch analysis when employed to monitor and evaluate the LC-MS system in an untargeted metabolomic analysis. Thus, in addition to pooled QC samples, a TM can be employed in untargeted metabolomics to rapidly assess the system performance avoiding unnecessary efforts for further data treatment and multivariate analysis of poor-quality data.
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spelling Development and application of a test mixture for untargeted liquid chromatography-mass spectrometry analysis of urine samplesLC-MSuntargeted metabolomicsquality controlIEMMetabolic profiling of complex biological matrices based on liquid chromatography-mass spectrometry (LC-MS) allows detecting a wide range of metabolites with distinct concentrations and physicochemical properties. Given the complexity of samples and the necessity of a comprehensive approach in untargeted metabolomics, quality control strategies are mandatory to obtain high-quality data. The LC-MS performance must be monitored and evaluated to guarantee data reliability. In this study, a test mixture (TM) was developed, systematically evaluated, and applied to untargeted metabolomics of urine samples from individuals suspected of inborn errors of metabolism. The TM was composed of fifteen analytes that eluted across the entire gradient in reversed-phase columns and ionized in positive/negative electrospray modes. It helped set the LC-MS conditions for urine analysis, from sample reconstitution solvent to selecting the MS ion source parameters. The TM quickly indicated column stationary phase degradation during the batch analysis when employed to monitor and evaluate the LC-MS system in an untargeted metabolomic analysis. Thus, in addition to pooled QC samples, a TM can be employed in untargeted metabolomics to rapidly assess the system performance avoiding unnecessary efforts for further data treatment and multivariate analysis of poor-quality data.Sociedade Brasileira de Química2022-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-40422022000100089Química Nova v.45 n.1 2022reponame:Química Nova (Online)instname:Sociedade Brasileira de Química (SBQ)instacron:SBQ10.21577/0100-4042.20170796info:eu-repo/semantics/openAccessTorres,Clarisse LSardela,Vinicius FScalco,Fernanda BAquino Neto,Francisco R. deGarrett,Rafaeleng2022-03-07T00:00:00Zoai:scielo:S0100-40422022000100089Revistahttps://www.scielo.br/j/qn/ONGhttps://old.scielo.br/oai/scielo-oai.phpquimicanova@sbq.org.br1678-70640100-4042opendoar:2022-03-07T00:00Química Nova (Online) - Sociedade Brasileira de Química (SBQ)false
dc.title.none.fl_str_mv Development and application of a test mixture for untargeted liquid chromatography-mass spectrometry analysis of urine samples
title Development and application of a test mixture for untargeted liquid chromatography-mass spectrometry analysis of urine samples
spellingShingle Development and application of a test mixture for untargeted liquid chromatography-mass spectrometry analysis of urine samples
Torres,Clarisse L
LC-MS
untargeted metabolomics
quality control
IEM
title_short Development and application of a test mixture for untargeted liquid chromatography-mass spectrometry analysis of urine samples
title_full Development and application of a test mixture for untargeted liquid chromatography-mass spectrometry analysis of urine samples
title_fullStr Development and application of a test mixture for untargeted liquid chromatography-mass spectrometry analysis of urine samples
title_full_unstemmed Development and application of a test mixture for untargeted liquid chromatography-mass spectrometry analysis of urine samples
title_sort Development and application of a test mixture for untargeted liquid chromatography-mass spectrometry analysis of urine samples
author Torres,Clarisse L
author_facet Torres,Clarisse L
Sardela,Vinicius F
Scalco,Fernanda B
Aquino Neto,Francisco R. de
Garrett,Rafael
author_role author
author2 Sardela,Vinicius F
Scalco,Fernanda B
Aquino Neto,Francisco R. de
Garrett,Rafael
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Torres,Clarisse L
Sardela,Vinicius F
Scalco,Fernanda B
Aquino Neto,Francisco R. de
Garrett,Rafael
dc.subject.por.fl_str_mv LC-MS
untargeted metabolomics
quality control
IEM
topic LC-MS
untargeted metabolomics
quality control
IEM
description Metabolic profiling of complex biological matrices based on liquid chromatography-mass spectrometry (LC-MS) allows detecting a wide range of metabolites with distinct concentrations and physicochemical properties. Given the complexity of samples and the necessity of a comprehensive approach in untargeted metabolomics, quality control strategies are mandatory to obtain high-quality data. The LC-MS performance must be monitored and evaluated to guarantee data reliability. In this study, a test mixture (TM) was developed, systematically evaluated, and applied to untargeted metabolomics of urine samples from individuals suspected of inborn errors of metabolism. The TM was composed of fifteen analytes that eluted across the entire gradient in reversed-phase columns and ionized in positive/negative electrospray modes. It helped set the LC-MS conditions for urine analysis, from sample reconstitution solvent to selecting the MS ion source parameters. The TM quickly indicated column stationary phase degradation during the batch analysis when employed to monitor and evaluate the LC-MS system in an untargeted metabolomic analysis. Thus, in addition to pooled QC samples, a TM can be employed in untargeted metabolomics to rapidly assess the system performance avoiding unnecessary efforts for further data treatment and multivariate analysis of poor-quality data.
publishDate 2022
dc.date.none.fl_str_mv 2022-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-40422022000100089
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-40422022000100089
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.21577/0100-4042.20170796
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Química
publisher.none.fl_str_mv Sociedade Brasileira de Química
dc.source.none.fl_str_mv Química Nova v.45 n.1 2022
reponame:Química Nova (Online)
instname:Sociedade Brasileira de Química (SBQ)
instacron:SBQ
instname_str Sociedade Brasileira de Química (SBQ)
instacron_str SBQ
institution SBQ
reponame_str Química Nova (Online)
collection Química Nova (Online)
repository.name.fl_str_mv Química Nova (Online) - Sociedade Brasileira de Química (SBQ)
repository.mail.fl_str_mv quimicanova@sbq.org.br
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