Molecular systematics of Thorea (Rhodophyta, Thoreales) species in Brazil

Detalhes bibliográficos
Autor(a) principal: Necchi Júnior,Orlando
Data de Publicação: 2010
Outros Autores: Oliveira,Mariana Cabral de, Salles,Patrícia
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Journal of Botany
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-84042010000200004
Resumo: This study aimed to evaluate species level taxonomy and phylogenetic relationship among Thorea species in Brazil and other regions of the world using two molecular markers - RUBISCO large subunit plastid gene (rbcL) and nuclear small-subunit ribosomal DNA (SSU rDNA). Three samples of Thorea from Brazil (states of Mato Grosso do Sul and São Paulo) and one sample from Dominican Republic (DR) were sequenced. Analyses based on partial sequences of rbcL (1,282 bp) and complete sequences of SSU (1,752 bp) were essentially congruent and revealed that Thoreales formed a distinct monophyletic clade, which had two major branches with high support, representing the genera Thorea and Nemalionopsis. Thorea clade had four main branches with high support for all analyses, each one representing the species: 1) T. gaudichaudii C. Agardh from Asia (Japan and Philippines) - this clade occurred only in the rbcL analyses; 2) T. violacea Bory from Asia (Japan) and North America (U.S.A. and DR); 3) T. hispida (Thore) Desvaux from Europe (England) and Asia (Japan); 4) a distinct group with the three Brazilian samples (sequence identity: rbcL 97.2%, 1,246 bp; SSU 96.0-98.1%, 1,699-1,720 bp). The Brazilian samples clearly formed a monophyletic clade based on both molecular markers and was interpreted as a separate species, for which we resurrected the name T. bachmannii Pujals. Morphological and molecular evidences indicate that the Thoreales is well-resolved at ordinal and generic levels. In contrast, Thorea species recognized by molecular data require additional characters (e.g. reproductive and chromosome numbers) to allow consistent and reliable taxonomic circumscription aiming at a world revision based on molecular and morphological evidences.
id SBSP-1_0cd2b70c04864a268c7eebde61256e50
oai_identifier_str oai:scielo:S0100-84042010000200004
network_acronym_str SBSP-1
network_name_str Brazilian Journal of Botany
repository_id_str
spelling Molecular systematics of Thorea (Rhodophyta, Thoreales) species in Brazilfreshwater RhodophytarbcLSSU rDNAThoreaThorealesThis study aimed to evaluate species level taxonomy and phylogenetic relationship among Thorea species in Brazil and other regions of the world using two molecular markers - RUBISCO large subunit plastid gene (rbcL) and nuclear small-subunit ribosomal DNA (SSU rDNA). Three samples of Thorea from Brazil (states of Mato Grosso do Sul and São Paulo) and one sample from Dominican Republic (DR) were sequenced. Analyses based on partial sequences of rbcL (1,282 bp) and complete sequences of SSU (1,752 bp) were essentially congruent and revealed that Thoreales formed a distinct monophyletic clade, which had two major branches with high support, representing the genera Thorea and Nemalionopsis. Thorea clade had four main branches with high support for all analyses, each one representing the species: 1) T. gaudichaudii C. Agardh from Asia (Japan and Philippines) - this clade occurred only in the rbcL analyses; 2) T. violacea Bory from Asia (Japan) and North America (U.S.A. and DR); 3) T. hispida (Thore) Desvaux from Europe (England) and Asia (Japan); 4) a distinct group with the three Brazilian samples (sequence identity: rbcL 97.2%, 1,246 bp; SSU 96.0-98.1%, 1,699-1,720 bp). The Brazilian samples clearly formed a monophyletic clade based on both molecular markers and was interpreted as a separate species, for which we resurrected the name T. bachmannii Pujals. Morphological and molecular evidences indicate that the Thoreales is well-resolved at ordinal and generic levels. In contrast, Thorea species recognized by molecular data require additional characters (e.g. reproductive and chromosome numbers) to allow consistent and reliable taxonomic circumscription aiming at a world revision based on molecular and morphological evidences.Sociedade Botânica de São Paulo2010-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-84042010000200004Brazilian Journal of Botany v.33 n.2 2010reponame:Brazilian Journal of Botanyinstname:Sociedade Botânica de São Paulo (SBSP)instacron:SBSP10.1590/S0100-84042010000200004info:eu-repo/semantics/openAccessNecchi Júnior,OrlandoOliveira,Mariana Cabral deSalles,Patríciaeng2010-09-01T00:00:00Zoai:scielo:S0100-84042010000200004Revistahttps://www.scielo.br/j/rbb/ONGhttps://old.scielo.br/oai/scielo-oai.phpbrazbot@gmail.com||brazbot@gmail.com1806-99590100-8404opendoar:2010-09-01T00:00Brazilian Journal of Botany - Sociedade Botânica de São Paulo (SBSP)false
dc.title.none.fl_str_mv Molecular systematics of Thorea (Rhodophyta, Thoreales) species in Brazil
title Molecular systematics of Thorea (Rhodophyta, Thoreales) species in Brazil
spellingShingle Molecular systematics of Thorea (Rhodophyta, Thoreales) species in Brazil
Necchi Júnior,Orlando
freshwater Rhodophyta
rbcL
SSU rDNA
Thorea
Thoreales
title_short Molecular systematics of Thorea (Rhodophyta, Thoreales) species in Brazil
title_full Molecular systematics of Thorea (Rhodophyta, Thoreales) species in Brazil
title_fullStr Molecular systematics of Thorea (Rhodophyta, Thoreales) species in Brazil
title_full_unstemmed Molecular systematics of Thorea (Rhodophyta, Thoreales) species in Brazil
title_sort Molecular systematics of Thorea (Rhodophyta, Thoreales) species in Brazil
author Necchi Júnior,Orlando
author_facet Necchi Júnior,Orlando
Oliveira,Mariana Cabral de
Salles,Patrícia
author_role author
author2 Oliveira,Mariana Cabral de
Salles,Patrícia
author2_role author
author
dc.contributor.author.fl_str_mv Necchi Júnior,Orlando
Oliveira,Mariana Cabral de
Salles,Patrícia
dc.subject.por.fl_str_mv freshwater Rhodophyta
rbcL
SSU rDNA
Thorea
Thoreales
topic freshwater Rhodophyta
rbcL
SSU rDNA
Thorea
Thoreales
description This study aimed to evaluate species level taxonomy and phylogenetic relationship among Thorea species in Brazil and other regions of the world using two molecular markers - RUBISCO large subunit plastid gene (rbcL) and nuclear small-subunit ribosomal DNA (SSU rDNA). Three samples of Thorea from Brazil (states of Mato Grosso do Sul and São Paulo) and one sample from Dominican Republic (DR) were sequenced. Analyses based on partial sequences of rbcL (1,282 bp) and complete sequences of SSU (1,752 bp) were essentially congruent and revealed that Thoreales formed a distinct monophyletic clade, which had two major branches with high support, representing the genera Thorea and Nemalionopsis. Thorea clade had four main branches with high support for all analyses, each one representing the species: 1) T. gaudichaudii C. Agardh from Asia (Japan and Philippines) - this clade occurred only in the rbcL analyses; 2) T. violacea Bory from Asia (Japan) and North America (U.S.A. and DR); 3) T. hispida (Thore) Desvaux from Europe (England) and Asia (Japan); 4) a distinct group with the three Brazilian samples (sequence identity: rbcL 97.2%, 1,246 bp; SSU 96.0-98.1%, 1,699-1,720 bp). The Brazilian samples clearly formed a monophyletic clade based on both molecular markers and was interpreted as a separate species, for which we resurrected the name T. bachmannii Pujals. Morphological and molecular evidences indicate that the Thoreales is well-resolved at ordinal and generic levels. In contrast, Thorea species recognized by molecular data require additional characters (e.g. reproductive and chromosome numbers) to allow consistent and reliable taxonomic circumscription aiming at a world revision based on molecular and morphological evidences.
publishDate 2010
dc.date.none.fl_str_mv 2010-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-84042010000200004
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-84042010000200004
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0100-84042010000200004
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Botânica de São Paulo
publisher.none.fl_str_mv Sociedade Botânica de São Paulo
dc.source.none.fl_str_mv Brazilian Journal of Botany v.33 n.2 2010
reponame:Brazilian Journal of Botany
instname:Sociedade Botânica de São Paulo (SBSP)
instacron:SBSP
instname_str Sociedade Botânica de São Paulo (SBSP)
instacron_str SBSP
institution SBSP
reponame_str Brazilian Journal of Botany
collection Brazilian Journal of Botany
repository.name.fl_str_mv Brazilian Journal of Botany - Sociedade Botânica de São Paulo (SBSP)
repository.mail.fl_str_mv brazbot@gmail.com||brazbot@gmail.com
_version_ 1754734840355225600