Phylogenetic analyses of Cladophora vagabunda (L.) C. Hoek (Cladophorales, Chlorophyta) from Brazil based on SSU rDNA sequences

Detalhes bibliográficos
Autor(a) principal: Gestinari,Lísia Mônica de Souza
Data de Publicação: 2009
Outros Autores: Oliveira,Mariana Cabral de, Milstein,Daniela, Yoneshige-Valentin,Yocie, Pereira,Sonia Maria Barreto
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Journal of Botany
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-84042009000300012
Resumo: The complete SSU rDNA was sequenced for 10 individuals of Cladophora vagabunda collected along the coast of Brazil. For C. rupestris (L.) Kütz. a partial SSU rDNA sequence (1634 bp) was obtained. Phylogenetic trees indicate that Cladophora is paraphyletic, but the section Glomeratae sensu lato including C. vagabunda from Brazil, Japan and France, C. albida (Nees) Kütz., C. sericea (Hudson) Kütz., and C. glomerata (L.) Kütz. is monophyletic. Within this group C. vagabunda is paraphyletic. The sequence identity for the SSU rDNA varied from 98.9% to 100% for the Brazilian C. vagabunda, and from 98.3% to 99.7% comparing the Brazilian individuals to the ones from France and Japan. Sequence identity of the Brazilian C. vagabunda to C. albida and C. sericea vary from 98.0% to 98.6%. The SSU rDNA phylogeny support partially the morphological characteristics presented by Brazilian populations of C. vagabunda. On the other hand, C. rupestris from Brazil does not group with C. rupestris from France, both sequences presenting only 96.9% of identity. The inclusion of sequences of individuals from Brazil reinforces the need of taxonomical revision for the genus Cladophora and for the complex C. vagabunda.
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spelling Phylogenetic analyses of Cladophora vagabunda (L.) C. Hoek (Cladophorales, Chlorophyta) from Brazil based on SSU rDNA sequencesBrazilCladophora vagabundaCladophoralesmolecular phylogenySSU rDNAThe complete SSU rDNA was sequenced for 10 individuals of Cladophora vagabunda collected along the coast of Brazil. For C. rupestris (L.) Kütz. a partial SSU rDNA sequence (1634 bp) was obtained. Phylogenetic trees indicate that Cladophora is paraphyletic, but the section Glomeratae sensu lato including C. vagabunda from Brazil, Japan and France, C. albida (Nees) Kütz., C. sericea (Hudson) Kütz., and C. glomerata (L.) Kütz. is monophyletic. Within this group C. vagabunda is paraphyletic. The sequence identity for the SSU rDNA varied from 98.9% to 100% for the Brazilian C. vagabunda, and from 98.3% to 99.7% comparing the Brazilian individuals to the ones from France and Japan. Sequence identity of the Brazilian C. vagabunda to C. albida and C. sericea vary from 98.0% to 98.6%. The SSU rDNA phylogeny support partially the morphological characteristics presented by Brazilian populations of C. vagabunda. On the other hand, C. rupestris from Brazil does not group with C. rupestris from France, both sequences presenting only 96.9% of identity. The inclusion of sequences of individuals from Brazil reinforces the need of taxonomical revision for the genus Cladophora and for the complex C. vagabunda.Sociedade Botânica de São Paulo2009-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-84042009000300012Brazilian Journal of Botany v.32 n.3 2009reponame:Brazilian Journal of Botanyinstname:Sociedade Botânica de São Paulo (SBSP)instacron:SBSP10.1590/S0100-84042009000300012info:eu-repo/semantics/openAccessGestinari,Lísia Mônica de SouzaOliveira,Mariana Cabral deMilstein,DanielaYoneshige-Valentin,YociePereira,Sonia Maria Barretoeng2009-12-04T00:00:00Zoai:scielo:S0100-84042009000300012Revistahttps://www.scielo.br/j/rbb/ONGhttps://old.scielo.br/oai/scielo-oai.phpbrazbot@gmail.com||brazbot@gmail.com1806-99590100-8404opendoar:2009-12-04T00:00Brazilian Journal of Botany - Sociedade Botânica de São Paulo (SBSP)false
dc.title.none.fl_str_mv Phylogenetic analyses of Cladophora vagabunda (L.) C. Hoek (Cladophorales, Chlorophyta) from Brazil based on SSU rDNA sequences
title Phylogenetic analyses of Cladophora vagabunda (L.) C. Hoek (Cladophorales, Chlorophyta) from Brazil based on SSU rDNA sequences
spellingShingle Phylogenetic analyses of Cladophora vagabunda (L.) C. Hoek (Cladophorales, Chlorophyta) from Brazil based on SSU rDNA sequences
Gestinari,Lísia Mônica de Souza
Brazil
Cladophora vagabunda
Cladophorales
molecular phylogeny
SSU rDNA
title_short Phylogenetic analyses of Cladophora vagabunda (L.) C. Hoek (Cladophorales, Chlorophyta) from Brazil based on SSU rDNA sequences
title_full Phylogenetic analyses of Cladophora vagabunda (L.) C. Hoek (Cladophorales, Chlorophyta) from Brazil based on SSU rDNA sequences
title_fullStr Phylogenetic analyses of Cladophora vagabunda (L.) C. Hoek (Cladophorales, Chlorophyta) from Brazil based on SSU rDNA sequences
title_full_unstemmed Phylogenetic analyses of Cladophora vagabunda (L.) C. Hoek (Cladophorales, Chlorophyta) from Brazil based on SSU rDNA sequences
title_sort Phylogenetic analyses of Cladophora vagabunda (L.) C. Hoek (Cladophorales, Chlorophyta) from Brazil based on SSU rDNA sequences
author Gestinari,Lísia Mônica de Souza
author_facet Gestinari,Lísia Mônica de Souza
Oliveira,Mariana Cabral de
Milstein,Daniela
Yoneshige-Valentin,Yocie
Pereira,Sonia Maria Barreto
author_role author
author2 Oliveira,Mariana Cabral de
Milstein,Daniela
Yoneshige-Valentin,Yocie
Pereira,Sonia Maria Barreto
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Gestinari,Lísia Mônica de Souza
Oliveira,Mariana Cabral de
Milstein,Daniela
Yoneshige-Valentin,Yocie
Pereira,Sonia Maria Barreto
dc.subject.por.fl_str_mv Brazil
Cladophora vagabunda
Cladophorales
molecular phylogeny
SSU rDNA
topic Brazil
Cladophora vagabunda
Cladophorales
molecular phylogeny
SSU rDNA
description The complete SSU rDNA was sequenced for 10 individuals of Cladophora vagabunda collected along the coast of Brazil. For C. rupestris (L.) Kütz. a partial SSU rDNA sequence (1634 bp) was obtained. Phylogenetic trees indicate that Cladophora is paraphyletic, but the section Glomeratae sensu lato including C. vagabunda from Brazil, Japan and France, C. albida (Nees) Kütz., C. sericea (Hudson) Kütz., and C. glomerata (L.) Kütz. is monophyletic. Within this group C. vagabunda is paraphyletic. The sequence identity for the SSU rDNA varied from 98.9% to 100% for the Brazilian C. vagabunda, and from 98.3% to 99.7% comparing the Brazilian individuals to the ones from France and Japan. Sequence identity of the Brazilian C. vagabunda to C. albida and C. sericea vary from 98.0% to 98.6%. The SSU rDNA phylogeny support partially the morphological characteristics presented by Brazilian populations of C. vagabunda. On the other hand, C. rupestris from Brazil does not group with C. rupestris from France, both sequences presenting only 96.9% of identity. The inclusion of sequences of individuals from Brazil reinforces the need of taxonomical revision for the genus Cladophora and for the complex C. vagabunda.
publishDate 2009
dc.date.none.fl_str_mv 2009-09-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-84042009000300012
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-84042009000300012
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0100-84042009000300012
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Botânica de São Paulo
publisher.none.fl_str_mv Sociedade Botânica de São Paulo
dc.source.none.fl_str_mv Brazilian Journal of Botany v.32 n.3 2009
reponame:Brazilian Journal of Botany
instname:Sociedade Botânica de São Paulo (SBSP)
instacron:SBSP
instname_str Sociedade Botânica de São Paulo (SBSP)
instacron_str SBSP
institution SBSP
reponame_str Brazilian Journal of Botany
collection Brazilian Journal of Botany
repository.name.fl_str_mv Brazilian Journal of Botany - Sociedade Botânica de São Paulo (SBSP)
repository.mail.fl_str_mv brazbot@gmail.com||brazbot@gmail.com
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