Inclusion of genomic information in estimation of genetic parameters for body weights and visual scores in Nelore cattle

Detalhes bibliográficos
Autor(a) principal: Watanabe,Rafael Nakamura
Data de Publicação: 2021
Outros Autores: Nascimento,Guilherme Batista do, Bernardes,Priscila Arrigucci, Costa,Rebeka Magalhães da, Lôbo,Raysildo Barbosa, Baldi,Fernando, Munari,Danísio Prado
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista Brasileira de Zootecnia (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-35982021000100406
Resumo: ABSTRACT The aim of this study was to evaluate genomic information inclusion in genetic parameter estimation of standardized body weight at birth and at 240, 365, and 450 days of age, and visual scores for body structure, precocity, and body muscularity, measured as yearlings in Nelore cattle. We compared genetic parameters, (co)variance components (estimated from Bayesian inference and Gibbs sampling), breeding value accuracies, genetic trends, and principal component analysis (PCA) obtained through traditional GBLUP and ssGBLUP methods. For all traits analyzed, part of the phenotypic variation was explained by the additive genetic effect, thus indicating the capacity of traits to respond to the selection process. Estimates of genetic correlation, in both methodologies, between body weights and visual scores were, in general, high and positive, showing that the selection for visual scores can lead to heavier animals. Genetic trends showed genetic progress, both when estimated breeding values and genomic estimated breeding values were used. The PCA, genetic trends, and accuracy estimates on breeding values showed that inclusion of single nucleotide polymorphism information contributed towards slightly better estimates of the genetic variability of evaluated traits. Genomic information did not bring greater gains in genetic estimates, due to redundancy of kinship information from the pedigree, which already had complete animal kinship data.
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spelling Inclusion of genomic information in estimation of genetic parameters for body weights and visual scores in Nelore cattlebeef cattlegenetic parametersgenetic trendsgrowth traitsselectionABSTRACT The aim of this study was to evaluate genomic information inclusion in genetic parameter estimation of standardized body weight at birth and at 240, 365, and 450 days of age, and visual scores for body structure, precocity, and body muscularity, measured as yearlings in Nelore cattle. We compared genetic parameters, (co)variance components (estimated from Bayesian inference and Gibbs sampling), breeding value accuracies, genetic trends, and principal component analysis (PCA) obtained through traditional GBLUP and ssGBLUP methods. For all traits analyzed, part of the phenotypic variation was explained by the additive genetic effect, thus indicating the capacity of traits to respond to the selection process. Estimates of genetic correlation, in both methodologies, between body weights and visual scores were, in general, high and positive, showing that the selection for visual scores can lead to heavier animals. Genetic trends showed genetic progress, both when estimated breeding values and genomic estimated breeding values were used. The PCA, genetic trends, and accuracy estimates on breeding values showed that inclusion of single nucleotide polymorphism information contributed towards slightly better estimates of the genetic variability of evaluated traits. Genomic information did not bring greater gains in genetic estimates, due to redundancy of kinship information from the pedigree, which already had complete animal kinship data.Sociedade Brasileira de Zootecnia2021-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-35982021000100406Revista Brasileira de Zootecnia v.50 2021reponame:Revista Brasileira de Zootecnia (Online)instname:Sociedade Brasileira de Zootecnia (SBZ)instacron:SBZ10.37496/rbz5020200077info:eu-repo/semantics/openAccessWatanabe,Rafael NakamuraNascimento,Guilherme Batista doBernardes,Priscila ArrigucciCosta,Rebeka Magalhães daLôbo,Raysildo BarbosaBaldi,FernandoMunari,Danísio Pradoeng2021-09-02T00:00:00Zoai:scielo:S1516-35982021000100406Revistahttps://www.rbz.org.br/pt-br/https://old.scielo.br/oai/scielo-oai.php||bz@sbz.org.br|| secretariarbz@sbz.org.br1806-92901516-3598opendoar:2021-09-02T00:00Revista Brasileira de Zootecnia (Online) - Sociedade Brasileira de Zootecnia (SBZ)false
dc.title.none.fl_str_mv Inclusion of genomic information in estimation of genetic parameters for body weights and visual scores in Nelore cattle
title Inclusion of genomic information in estimation of genetic parameters for body weights and visual scores in Nelore cattle
spellingShingle Inclusion of genomic information in estimation of genetic parameters for body weights and visual scores in Nelore cattle
Watanabe,Rafael Nakamura
beef cattle
genetic parameters
genetic trends
growth traits
selection
title_short Inclusion of genomic information in estimation of genetic parameters for body weights and visual scores in Nelore cattle
title_full Inclusion of genomic information in estimation of genetic parameters for body weights and visual scores in Nelore cattle
title_fullStr Inclusion of genomic information in estimation of genetic parameters for body weights and visual scores in Nelore cattle
title_full_unstemmed Inclusion of genomic information in estimation of genetic parameters for body weights and visual scores in Nelore cattle
title_sort Inclusion of genomic information in estimation of genetic parameters for body weights and visual scores in Nelore cattle
author Watanabe,Rafael Nakamura
author_facet Watanabe,Rafael Nakamura
Nascimento,Guilherme Batista do
Bernardes,Priscila Arrigucci
Costa,Rebeka Magalhães da
Lôbo,Raysildo Barbosa
Baldi,Fernando
Munari,Danísio Prado
author_role author
author2 Nascimento,Guilherme Batista do
Bernardes,Priscila Arrigucci
Costa,Rebeka Magalhães da
Lôbo,Raysildo Barbosa
Baldi,Fernando
Munari,Danísio Prado
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Watanabe,Rafael Nakamura
Nascimento,Guilherme Batista do
Bernardes,Priscila Arrigucci
Costa,Rebeka Magalhães da
Lôbo,Raysildo Barbosa
Baldi,Fernando
Munari,Danísio Prado
dc.subject.por.fl_str_mv beef cattle
genetic parameters
genetic trends
growth traits
selection
topic beef cattle
genetic parameters
genetic trends
growth traits
selection
description ABSTRACT The aim of this study was to evaluate genomic information inclusion in genetic parameter estimation of standardized body weight at birth and at 240, 365, and 450 days of age, and visual scores for body structure, precocity, and body muscularity, measured as yearlings in Nelore cattle. We compared genetic parameters, (co)variance components (estimated from Bayesian inference and Gibbs sampling), breeding value accuracies, genetic trends, and principal component analysis (PCA) obtained through traditional GBLUP and ssGBLUP methods. For all traits analyzed, part of the phenotypic variation was explained by the additive genetic effect, thus indicating the capacity of traits to respond to the selection process. Estimates of genetic correlation, in both methodologies, between body weights and visual scores were, in general, high and positive, showing that the selection for visual scores can lead to heavier animals. Genetic trends showed genetic progress, both when estimated breeding values and genomic estimated breeding values were used. The PCA, genetic trends, and accuracy estimates on breeding values showed that inclusion of single nucleotide polymorphism information contributed towards slightly better estimates of the genetic variability of evaluated traits. Genomic information did not bring greater gains in genetic estimates, due to redundancy of kinship information from the pedigree, which already had complete animal kinship data.
publishDate 2021
dc.date.none.fl_str_mv 2021-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-35982021000100406
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-35982021000100406
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.37496/rbz5020200077
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Sociedade Brasileira de Zootecnia
publisher.none.fl_str_mv Sociedade Brasileira de Zootecnia
dc.source.none.fl_str_mv Revista Brasileira de Zootecnia v.50 2021
reponame:Revista Brasileira de Zootecnia (Online)
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reponame_str Revista Brasileira de Zootecnia (Online)
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