Hierarchical Bayesian models for genotype × environment estimates in post-weaning gain of Hereford bovine via reaction norms

Detalhes bibliográficos
Autor(a) principal: Cardoso,Leandro Lunardini
Data de Publicação: 2011
Outros Autores: Braccini Neto,José, Cardoso,Fernando Flores, Cobuci,Jaime Araújo, Biassus,Igor de Oliveira, Barcellos,Júlio Otávio Jardim
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista Brasileira de Zootecnia (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-35982011000200009
Resumo: It was evaluated statistical models with different assumptions to define the one that best describes the presence of genotype × environment interaction on adjusted post-weaning weight gain (PWG345) of Hereford cattle, through the study of reactions norms to the environment, obtained by random regression using a Bayesian approach. Four reaction norms hierarchical models (RNHM) were used through the INTERGEN program. The RNHM K uses the solutions of contemporary groups previously estimated by the standard animal model (AM) and considers them as environmental level for predicting the reaction norms and the RNHM S, which jointly estimate these two sets of unknowns. For both models, two versions were considered, one with a homogeneous (hm) and another with a heterogeneous (ht) residual variance. Based on the deviance information criterion and Bayes factor, RNHMs hm showed the best fit to the data, and by the deviance based on conditional predictive ordinate, the best fit was the RNHM Kht, whereas, by all the three criteria used, the worst fit was obtained by using the standard animal model. Heritabilities estimated on RNHM were increasing in the environmental gradients for PWG345, at -60 kg, 0 and +60 kg. The genetic correlation estimated between the level and slope of reaction norms was high, from 0.97 to 0.99, characterizing a scale effect on genotype × environment interaction. The reaction norms hierarchical models are efficient to describe the changes in variance components due to the environment and to describe the presence of genotype × environment interaction on PWG345 trait of Hereford cattle.
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spelling Hierarchical Bayesian models for genotype × environment estimates in post-weaning gain of Hereford bovine via reaction normsadaptabilityBayesian inferenceenvironmental sensitivitygenetic evaluationrandom regressionIt was evaluated statistical models with different assumptions to define the one that best describes the presence of genotype × environment interaction on adjusted post-weaning weight gain (PWG345) of Hereford cattle, through the study of reactions norms to the environment, obtained by random regression using a Bayesian approach. Four reaction norms hierarchical models (RNHM) were used through the INTERGEN program. The RNHM K uses the solutions of contemporary groups previously estimated by the standard animal model (AM) and considers them as environmental level for predicting the reaction norms and the RNHM S, which jointly estimate these two sets of unknowns. For both models, two versions were considered, one with a homogeneous (hm) and another with a heterogeneous (ht) residual variance. Based on the deviance information criterion and Bayes factor, RNHMs hm showed the best fit to the data, and by the deviance based on conditional predictive ordinate, the best fit was the RNHM Kht, whereas, by all the three criteria used, the worst fit was obtained by using the standard animal model. Heritabilities estimated on RNHM were increasing in the environmental gradients for PWG345, at -60 kg, 0 and +60 kg. The genetic correlation estimated between the level and slope of reaction norms was high, from 0.97 to 0.99, characterizing a scale effect on genotype × environment interaction. The reaction norms hierarchical models are efficient to describe the changes in variance components due to the environment and to describe the presence of genotype × environment interaction on PWG345 trait of Hereford cattle.Sociedade Brasileira de Zootecnia2011-02-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-35982011000200009Revista Brasileira de Zootecnia v.40 n.2 2011reponame:Revista Brasileira de Zootecnia (Online)instname:Sociedade Brasileira de Zootecnia (SBZ)instacron:SBZ10.1590/S1516-35982011000200009info:eu-repo/semantics/openAccessCardoso,Leandro LunardiniBraccini Neto,JoséCardoso,Fernando FloresCobuci,Jaime AraújoBiassus,Igor de OliveiraBarcellos,Júlio Otávio Jardimeng2011-03-02T00:00:00Zoai:scielo:S1516-35982011000200009Revistahttps://www.rbz.org.br/pt-br/https://old.scielo.br/oai/scielo-oai.php||bz@sbz.org.br|| secretariarbz@sbz.org.br1806-92901516-3598opendoar:2011-03-02T00:00Revista Brasileira de Zootecnia (Online) - Sociedade Brasileira de Zootecnia (SBZ)false
dc.title.none.fl_str_mv Hierarchical Bayesian models for genotype × environment estimates in post-weaning gain of Hereford bovine via reaction norms
title Hierarchical Bayesian models for genotype × environment estimates in post-weaning gain of Hereford bovine via reaction norms
spellingShingle Hierarchical Bayesian models for genotype × environment estimates in post-weaning gain of Hereford bovine via reaction norms
Cardoso,Leandro Lunardini
adaptability
Bayesian inference
environmental sensitivity
genetic evaluation
random regression
title_short Hierarchical Bayesian models for genotype × environment estimates in post-weaning gain of Hereford bovine via reaction norms
title_full Hierarchical Bayesian models for genotype × environment estimates in post-weaning gain of Hereford bovine via reaction norms
title_fullStr Hierarchical Bayesian models for genotype × environment estimates in post-weaning gain of Hereford bovine via reaction norms
title_full_unstemmed Hierarchical Bayesian models for genotype × environment estimates in post-weaning gain of Hereford bovine via reaction norms
title_sort Hierarchical Bayesian models for genotype × environment estimates in post-weaning gain of Hereford bovine via reaction norms
author Cardoso,Leandro Lunardini
author_facet Cardoso,Leandro Lunardini
Braccini Neto,José
Cardoso,Fernando Flores
Cobuci,Jaime Araújo
Biassus,Igor de Oliveira
Barcellos,Júlio Otávio Jardim
author_role author
author2 Braccini Neto,José
Cardoso,Fernando Flores
Cobuci,Jaime Araújo
Biassus,Igor de Oliveira
Barcellos,Júlio Otávio Jardim
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Cardoso,Leandro Lunardini
Braccini Neto,José
Cardoso,Fernando Flores
Cobuci,Jaime Araújo
Biassus,Igor de Oliveira
Barcellos,Júlio Otávio Jardim
dc.subject.por.fl_str_mv adaptability
Bayesian inference
environmental sensitivity
genetic evaluation
random regression
topic adaptability
Bayesian inference
environmental sensitivity
genetic evaluation
random regression
description It was evaluated statistical models with different assumptions to define the one that best describes the presence of genotype × environment interaction on adjusted post-weaning weight gain (PWG345) of Hereford cattle, through the study of reactions norms to the environment, obtained by random regression using a Bayesian approach. Four reaction norms hierarchical models (RNHM) were used through the INTERGEN program. The RNHM K uses the solutions of contemporary groups previously estimated by the standard animal model (AM) and considers them as environmental level for predicting the reaction norms and the RNHM S, which jointly estimate these two sets of unknowns. For both models, two versions were considered, one with a homogeneous (hm) and another with a heterogeneous (ht) residual variance. Based on the deviance information criterion and Bayes factor, RNHMs hm showed the best fit to the data, and by the deviance based on conditional predictive ordinate, the best fit was the RNHM Kht, whereas, by all the three criteria used, the worst fit was obtained by using the standard animal model. Heritabilities estimated on RNHM were increasing in the environmental gradients for PWG345, at -60 kg, 0 and +60 kg. The genetic correlation estimated between the level and slope of reaction norms was high, from 0.97 to 0.99, characterizing a scale effect on genotype × environment interaction. The reaction norms hierarchical models are efficient to describe the changes in variance components due to the environment and to describe the presence of genotype × environment interaction on PWG345 trait of Hereford cattle.
publishDate 2011
dc.date.none.fl_str_mv 2011-02-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-35982011000200009
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1516-35982011000200009
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dc.publisher.none.fl_str_mv Sociedade Brasileira de Zootecnia
publisher.none.fl_str_mv Sociedade Brasileira de Zootecnia
dc.source.none.fl_str_mv Revista Brasileira de Zootecnia v.40 n.2 2011
reponame:Revista Brasileira de Zootecnia (Online)
instname:Sociedade Brasileira de Zootecnia (SBZ)
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reponame_str Revista Brasileira de Zootecnia (Online)
collection Revista Brasileira de Zootecnia (Online)
repository.name.fl_str_mv Revista Brasileira de Zootecnia (Online) - Sociedade Brasileira de Zootecnia (SBZ)
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