Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD.
Autor(a) principal: | |
---|---|
Data de Publicação: | 2004 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFSCAR |
Texto Completo: | https://repositorio.ufscar.br/handle/ufscar/5434 |
Resumo: | Molecular markers were used to examine the genetic variability of eight landraces of peach palm (Bactris gasipaes var. gasipaes) and two wild populations (B. gasipaes var. chichagui), their relationships and genetic structures. Two hundred plants of these 8 races were used and 18 plants of the two wild populations, one from the Magdalena River, Colômbia, and the other from the Xingu River, Pará, Brasil. Eight primers were used to generate RAPD markers, of which 124 markers were obtained with 101 polymorphic. The observed heterozygosity of the set of landraces and wild populations was 0.38, with 93 % polymorphism, both slightly greater than in earlier studies. The Amazonian landraces had greater heterozygosity and % polymorphism than the Central American race. The structure of the dendrogram based on Nei s (1972) distances with the four previously studied landraces was similar to that study, essentially validating it and confirming two landrace groups one Occidental and one Oriental. When the Juruá landrace was added to the analysis, it joined with the other Occidental races, as expected by its geographic position. When the other landraces (with small sample sizes) were added to the analysis, a consistency and some problems were observed. The consistency was that all the landraces joined the Occidental group, expected by their geographic positions. The problems were the grouping of the Vaupés landrace with the Juruá landrace, which are geographically distant and have different fruit sizes and shapes. The relationship between the Cauca landrace and the Inirida landrace was also problematic, since they are geographically separated. These problems can only be resolved with new germplasm collections in the appropriate geographic areas and with an appropriate number of individuals. The two wild populations joined the landraces at a great distance, suggesting that they did not participate in the domestication of the cultivated landraces and indirectly reenforcing the hypothesis of a single origin in southwestern Amazonia. |
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Silva, Cirlande Cabral daAstolfi Filho, Spartacohttp://genos.cnpq.br:12010/dwlattes/owa/prc_imp_cv_int?f_cod=K4781849Y1http://lattes.cnpq.br/3405754239635541c9644370-ec86-4b6a-a0a7-f6418d2b7a242016-06-02T20:21:18Z2007-07-062016-06-02T20:21:18Z2004-08-31SILVA, Cirlande Cabral da. Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD.. 2004. 82 f. Dissertação (Mestrado em Ciências Biológicas) - Universidade Federal de São Carlos, São Carlos, 2004.https://repositorio.ufscar.br/handle/ufscar/5434Molecular markers were used to examine the genetic variability of eight landraces of peach palm (Bactris gasipaes var. gasipaes) and two wild populations (B. gasipaes var. chichagui), their relationships and genetic structures. Two hundred plants of these 8 races were used and 18 plants of the two wild populations, one from the Magdalena River, Colômbia, and the other from the Xingu River, Pará, Brasil. Eight primers were used to generate RAPD markers, of which 124 markers were obtained with 101 polymorphic. The observed heterozygosity of the set of landraces and wild populations was 0.38, with 93 % polymorphism, both slightly greater than in earlier studies. The Amazonian landraces had greater heterozygosity and % polymorphism than the Central American race. The structure of the dendrogram based on Nei s (1972) distances with the four previously studied landraces was similar to that study, essentially validating it and confirming two landrace groups one Occidental and one Oriental. When the Juruá landrace was added to the analysis, it joined with the other Occidental races, as expected by its geographic position. When the other landraces (with small sample sizes) were added to the analysis, a consistency and some problems were observed. The consistency was that all the landraces joined the Occidental group, expected by their geographic positions. The problems were the grouping of the Vaupés landrace with the Juruá landrace, which are geographically distant and have different fruit sizes and shapes. The relationship between the Cauca landrace and the Inirida landrace was also problematic, since they are geographically separated. These problems can only be resolved with new germplasm collections in the appropriate geographic areas and with an appropriate number of individuals. The two wild populations joined the landraces at a great distance, suggesting that they did not participate in the domestication of the cultivated landraces and indirectly reenforcing the hypothesis of a single origin in southwestern Amazonia.Marcadores moleculares foram utilizados para verificar a variabilidade genética de oito raças primitivas de pupunha (Bactris gasipaes var. gasipaes) e duas populações silvestres (B. gasipaes var. chichagui), suas relações e estruturas genéticas. Foram utilizadas 200 plantas das 8 raças primitivas de pupunha e 18 plantas de duas populações silvestres, sendo uma do rio Magdalena, Colômbia, e outra do rio Xingu, Pará, Brasil. Oito iniciadores foram usados para gerar marcadores RAPD, obtendo 124 marcadores, dos quais 101 polimórficos. A heterozigosidade observada do conjunto de raças e populações foi de 0,38, com porcentagem de polimorfismo de 93%, ambas um pouco maior que nos estudos anteriores. As raças da Amazônia apresentaram maiores heterozigosidades e % polimorfismo que a raça de América Central. A estrutura do dendrograma baseado nas distâncias de Nei (1972) para as quatro raças estudadas anteriormente foi muito similar a este primeiro estudo, essencialmente validando esta, e confirmando dois grupos de raças um Ocidental e um Oriental. Quando a raça Juruá foi adicionada à análise, se agrupou com as raças Ocidentais, como esperado pelo posicionamento geográfico. Quando as outras raças (com tamanhos amostrais insuficientes) foram adicionadas à análise, observou-se algumas consistências e problemas. A consistência principal foi o agrupamento de todas as raças ocidentais no lado ocidental do dendrograma. Os problemas foram os agrupamentos da raça Vaupés com a raça Juruá, que são distantes geograficamente e possuem formatos e tamanhos de fruto muito diferentes. A relação entre Cauca e Inirida também foi problemática, pois são geograficamente separadas. Estes problemas somente podem ser resolvidos com novas coletas de germoplasma nas áreas geográficas apropriadas com um número apropriado de indivíduos. As duas populações silvestres se agruparam muito longe das raças, sugerindo que não participaram da domesticação das populações cultivadas e indiretamente reforçando a hipótese de uma origem no sudoeste da Amazônia.application/pdfporUniversidade Federal de São CarlosPrograma de Pós-Graduação em Genética Evolutiva e Biologia Molecular - PPGGEvUFSCarBRGenética molecularPupunheiraRAPDCIENCIAS BIOLOGICAS::GENETICAAnálise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD.info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis-1-1676c613c-c295-491e-b3a9-977e6c69a4b3info:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFSCARinstname:Universidade Federal de São Carlos (UFSCAR)instacron:UFSCARORIGINALDissCCS.pdfapplication/pdf1405492https://repositorio.ufscar.br/bitstream/ufscar/5434/1/DissCCS.pdf1ccf925c4d6d2952c26ebbf9e80a1949MD51THUMBNAILDissCCS.pdf.jpgDissCCS.pdf.jpgIM Thumbnailimage/jpeg7583https://repositorio.ufscar.br/bitstream/ufscar/5434/2/DissCCS.pdf.jpgf0ef7e6253d5eea0c91335bc33e9af0dMD52ufscar/54342023-09-18 18:31:07.125oai:repositorio.ufscar.br:ufscar/5434Repositório InstitucionalPUBhttps://repositorio.ufscar.br/oai/requestopendoar:43222023-09-18T18:31:07Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)false |
dc.title.por.fl_str_mv |
Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD. |
title |
Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD. |
spellingShingle |
Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD. Silva, Cirlande Cabral da Genética molecular Pupunheira RAPD CIENCIAS BIOLOGICAS::GENETICA |
title_short |
Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD. |
title_full |
Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD. |
title_fullStr |
Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD. |
title_full_unstemmed |
Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD. |
title_sort |
Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD. |
author |
Silva, Cirlande Cabral da |
author_facet |
Silva, Cirlande Cabral da |
author_role |
author |
dc.contributor.authorlattes.por.fl_str_mv |
http://lattes.cnpq.br/3405754239635541 |
dc.contributor.author.fl_str_mv |
Silva, Cirlande Cabral da |
dc.contributor.advisor1.fl_str_mv |
Astolfi Filho, Spartaco |
dc.contributor.advisor1Lattes.fl_str_mv |
http://genos.cnpq.br:12010/dwlattes/owa/prc_imp_cv_int?f_cod=K4781849Y1 |
dc.contributor.authorID.fl_str_mv |
c9644370-ec86-4b6a-a0a7-f6418d2b7a24 |
contributor_str_mv |
Astolfi Filho, Spartaco |
dc.subject.por.fl_str_mv |
Genética molecular Pupunheira RAPD |
topic |
Genética molecular Pupunheira RAPD CIENCIAS BIOLOGICAS::GENETICA |
dc.subject.cnpq.fl_str_mv |
CIENCIAS BIOLOGICAS::GENETICA |
description |
Molecular markers were used to examine the genetic variability of eight landraces of peach palm (Bactris gasipaes var. gasipaes) and two wild populations (B. gasipaes var. chichagui), their relationships and genetic structures. Two hundred plants of these 8 races were used and 18 plants of the two wild populations, one from the Magdalena River, Colômbia, and the other from the Xingu River, Pará, Brasil. Eight primers were used to generate RAPD markers, of which 124 markers were obtained with 101 polymorphic. The observed heterozygosity of the set of landraces and wild populations was 0.38, with 93 % polymorphism, both slightly greater than in earlier studies. The Amazonian landraces had greater heterozygosity and % polymorphism than the Central American race. The structure of the dendrogram based on Nei s (1972) distances with the four previously studied landraces was similar to that study, essentially validating it and confirming two landrace groups one Occidental and one Oriental. When the Juruá landrace was added to the analysis, it joined with the other Occidental races, as expected by its geographic position. When the other landraces (with small sample sizes) were added to the analysis, a consistency and some problems were observed. The consistency was that all the landraces joined the Occidental group, expected by their geographic positions. The problems were the grouping of the Vaupés landrace with the Juruá landrace, which are geographically distant and have different fruit sizes and shapes. The relationship between the Cauca landrace and the Inirida landrace was also problematic, since they are geographically separated. These problems can only be resolved with new germplasm collections in the appropriate geographic areas and with an appropriate number of individuals. The two wild populations joined the landraces at a great distance, suggesting that they did not participate in the domestication of the cultivated landraces and indirectly reenforcing the hypothesis of a single origin in southwestern Amazonia. |
publishDate |
2004 |
dc.date.issued.fl_str_mv |
2004-08-31 |
dc.date.available.fl_str_mv |
2007-07-06 2016-06-02T20:21:18Z |
dc.date.accessioned.fl_str_mv |
2016-06-02T20:21:18Z |
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info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
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masterThesis |
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publishedVersion |
dc.identifier.citation.fl_str_mv |
SILVA, Cirlande Cabral da. Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD.. 2004. 82 f. Dissertação (Mestrado em Ciências Biológicas) - Universidade Federal de São Carlos, São Carlos, 2004. |
dc.identifier.uri.fl_str_mv |
https://repositorio.ufscar.br/handle/ufscar/5434 |
identifier_str_mv |
SILVA, Cirlande Cabral da. Análise molecular e validação de raças primitivas de pupunha (Bactris gasipeaes) por meio de marcaodres RAPD.. 2004. 82 f. Dissertação (Mestrado em Ciências Biológicas) - Universidade Federal de São Carlos, São Carlos, 2004. |
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https://repositorio.ufscar.br/handle/ufscar/5434 |
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Universidade Federal de São Carlos |
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Programa de Pós-Graduação em Genética Evolutiva e Biologia Molecular - PPGGEv |
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UFSCar |
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BR |
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Universidade Federal de São Carlos |
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