Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos

Detalhes bibliográficos
Autor(a) principal: Cioffi, Marcelo de Bello
Data de Publicação: 2010
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFSCAR
Texto Completo: https://repositorio.ufscar.br/handle/ufscar/5467
Resumo: Hoplias malabaricus, a widespread Erythrinidae fish, is characterized by a karyotypic diversity, with seven karyomorphs already described. This report presented a comparative study of the karyomorphs A, B, C and D, which were previously included in a major karyotypic group (Group I), in order to evaluate the evolutionary relationships among them. The in situ investigation of several classes of repetitive DNAs added new informative characters useful in comparative genomics and provided new insights into the evolutionary relationships among karyomorphs. In addition to corroborate the inclusion of karyomorphs A-D in a close evolutionary group, the results provide further evidence for a greater proximity between the karyomorphs A-B and karyomorphs C-D. A comparative analysis among distinct populations of karyomorph A demonstrated a continuing genomic differentiation in this group, allowing the detection of recent evolutionary events, suggesting that this karyomorph cannot be considered an absolute evolutionary unit, as evidenced by their inner chromosomal differentiation. It was also expanded our knowledge of the sex chromosomes differentiation in H. malabaricus, allowing to conclude that repetitive DNAs played an important role in the differentiation process. It was detected a cryptic differentiated XX/XY sex chromosome system in karyomorph C, which is clearly correlated with the evolution of the X1X1X2X2/X1X2Y sex chromosome system of karyomorph D. The cytogenetic mapping of five classes of repetitive DNAs also indicated the probable derivation of the XX/XY chromosomes of karyomorph B from autosomal chromosomes of karyomorph A. In this case, the X chromosomes were seen as the preferred site for the accumulation of DNA repeats, which represents an unusual condition of X accumulating more repetitive DNAs than Y chromosome in fish. The overall results were able to demonstrate that the repetitive DNA fraction of the genome constitutes good evolutionary markers in H. malabaricus, allowing to improve the understanding of the evolutionary mechanisms that have generated the complex genomic structure found in this fish group.
id SCAR_0c2b74b1bc5d69d9b2791f85db3bf436
oai_identifier_str oai:repositorio.ufscar.br:ufscar/5467
network_acronym_str SCAR
network_name_str Repositório Institucional da UFSCAR
repository_id_str 4322
spelling Cioffi, Marcelo de BelloBertollo, Luiz Antonio Carloshttp://lattes.cnpq.br/0242034365085727b27fbb2e-c4ae-4e52-8c47-a2a23d96a6622016-06-02T20:21:23Z2010-02-102016-06-02T20:21:23Z2010-02-08CIOFFI, Marcelo de Bello. Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos. 2010. 200 f. Dissertação (Mestrado em Ciências Biológicas) - Universidade Federal de São Carlos, São Carlos, 2010.https://repositorio.ufscar.br/handle/ufscar/5467Hoplias malabaricus, a widespread Erythrinidae fish, is characterized by a karyotypic diversity, with seven karyomorphs already described. This report presented a comparative study of the karyomorphs A, B, C and D, which were previously included in a major karyotypic group (Group I), in order to evaluate the evolutionary relationships among them. The in situ investigation of several classes of repetitive DNAs added new informative characters useful in comparative genomics and provided new insights into the evolutionary relationships among karyomorphs. In addition to corroborate the inclusion of karyomorphs A-D in a close evolutionary group, the results provide further evidence for a greater proximity between the karyomorphs A-B and karyomorphs C-D. A comparative analysis among distinct populations of karyomorph A demonstrated a continuing genomic differentiation in this group, allowing the detection of recent evolutionary events, suggesting that this karyomorph cannot be considered an absolute evolutionary unit, as evidenced by their inner chromosomal differentiation. It was also expanded our knowledge of the sex chromosomes differentiation in H. malabaricus, allowing to conclude that repetitive DNAs played an important role in the differentiation process. It was detected a cryptic differentiated XX/XY sex chromosome system in karyomorph C, which is clearly correlated with the evolution of the X1X1X2X2/X1X2Y sex chromosome system of karyomorph D. The cytogenetic mapping of five classes of repetitive DNAs also indicated the probable derivation of the XX/XY chromosomes of karyomorph B from autosomal chromosomes of karyomorph A. In this case, the X chromosomes were seen as the preferred site for the accumulation of DNA repeats, which represents an unusual condition of X accumulating more repetitive DNAs than Y chromosome in fish. The overall results were able to demonstrate that the repetitive DNA fraction of the genome constitutes good evolutionary markers in H. malabaricus, allowing to improve the understanding of the evolutionary mechanisms that have generated the complex genomic structure found in this fish group.Hoplias malabaricus, um peixe eritrinídeo amplamente distribuído, é caracterizado por uma diversidade cariotípica, com sete cariomorfos já descritos. Este trabalho apresentou um estudo comparativo dos cariomorfos A, B, C e D, que foram previamente incluídos em um grupo cariotípico maior (Grupo I), com o intuito de avaliar as relações evolutivas entre eles. A investigação in situ de várias classes de DNAs repetitivos acrescentou novos caracteres informativos para estudos de genômica comparativa e forneceu novas informações sobre as relações evolutivas entre os cariomorfos. Além de corroborar a inclusão dos cariomorfos A-D em um grupo evolutivo próximo, os resultados forneceram evidencias adicionais para uma maior proximidade entre os cariomorfos A-B e entre os cariomorfos C-D. Uma análise comparativa entre diferentes populações do cariomorfo A demonstraram uma contínua diferenciação genômica neste grupo, permitindo a detecção de eventos evolutivos recentes, sugerindo que este cariomorfo não pode ser considerado uma unidade evolutiva absoluta, conforme evidenciado pelas suas diferenciações cromossômicas particulares. Foi também expandido nosso conhecimento sobre a diferenciação dos cromossomos sexuais em H. malabaricus, permitindo concluir que os DNAs repetitivos desempenharam um papel importante no processo de diferenciação destes cromossomos. Foi detectado um críptico sistema XX/XY de cromossomos sexuais no cariomorfo C, que se mostrou claramente relacionado com a evolução do sistema X1X1X2X2/X1X2Y de cromossomos sexuais do cariomorfo D. O mapeamento citogenético de cinco classes de DNAs repetitivos também indicaram a provável derivação dos cromossomos XX/XY do cariomorfo B à partir de cromossomos autossômicos do cariomorfo A. Neste caso, os cromossomo X foram identificados como sítios preferidos para o acúmulo sequencias repetitivas, representando uma condição incomum do X acumulando mais DNAs repetitivos do que o cromossomo Y em peixes. De maneira geral, os resultados permitiram demonstrar que a fração repetitiva do genoma constitui bons marcadores evolutivos em H. malabaricus, aprimorando o entendimento dos mecanismos evolutivos que geraram a complexa estrutura genômica encontrada neste grupo de peixes.Universidade Federal de Minas Geraisapplication/pdfporUniversidade Federal de São CarlosPrograma de Pós-Graduação em Genética Evolutiva e Biologia Molecular - PPGGEvUFSCarBRCitogenética de peixesEvolução cariotípicaDNA repetitivoCromossomos sexuaisCIENCIAS BIOLOGICAS::GENETICAMarcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfosinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis-1-1dd82edf4-2e72-469b-a8e7-af7ff7b1c1a7info:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFSCARinstname:Universidade Federal de São Carlos (UFSCAR)instacron:UFSCARORIGINAL2776.pdfapplication/pdf4048080https://repositorio.ufscar.br/bitstream/ufscar/5467/1/2776.pdfa61411c472576ea726a39ea95c16ca39MD51THUMBNAIL2776.pdf.jpg2776.pdf.jpgIM Thumbnailimage/jpeg7079https://repositorio.ufscar.br/bitstream/ufscar/5467/2/2776.pdf.jpg8110bf524471da4ec14f4119f42c3e61MD52ufscar/54672023-09-18 18:31:07.314oai:repositorio.ufscar.br:ufscar/5467Repositório InstitucionalPUBhttps://repositorio.ufscar.br/oai/requestopendoar:43222023-09-18T18:31:07Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)false
dc.title.por.fl_str_mv Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos
title Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos
spellingShingle Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos
Cioffi, Marcelo de Bello
Citogenética de peixes
Evolução cariotípica
DNA repetitivo
Cromossomos sexuais
CIENCIAS BIOLOGICAS::GENETICA
title_short Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos
title_full Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos
title_fullStr Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos
title_full_unstemmed Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos
title_sort Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos
author Cioffi, Marcelo de Bello
author_facet Cioffi, Marcelo de Bello
author_role author
dc.contributor.authorlattes.por.fl_str_mv http://lattes.cnpq.br/0242034365085727
dc.contributor.author.fl_str_mv Cioffi, Marcelo de Bello
dc.contributor.advisor1.fl_str_mv Bertollo, Luiz Antonio Carlos
dc.contributor.authorID.fl_str_mv b27fbb2e-c4ae-4e52-8c47-a2a23d96a662
contributor_str_mv Bertollo, Luiz Antonio Carlos
dc.subject.por.fl_str_mv Citogenética de peixes
Evolução cariotípica
DNA repetitivo
Cromossomos sexuais
topic Citogenética de peixes
Evolução cariotípica
DNA repetitivo
Cromossomos sexuais
CIENCIAS BIOLOGICAS::GENETICA
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::GENETICA
description Hoplias malabaricus, a widespread Erythrinidae fish, is characterized by a karyotypic diversity, with seven karyomorphs already described. This report presented a comparative study of the karyomorphs A, B, C and D, which were previously included in a major karyotypic group (Group I), in order to evaluate the evolutionary relationships among them. The in situ investigation of several classes of repetitive DNAs added new informative characters useful in comparative genomics and provided new insights into the evolutionary relationships among karyomorphs. In addition to corroborate the inclusion of karyomorphs A-D in a close evolutionary group, the results provide further evidence for a greater proximity between the karyomorphs A-B and karyomorphs C-D. A comparative analysis among distinct populations of karyomorph A demonstrated a continuing genomic differentiation in this group, allowing the detection of recent evolutionary events, suggesting that this karyomorph cannot be considered an absolute evolutionary unit, as evidenced by their inner chromosomal differentiation. It was also expanded our knowledge of the sex chromosomes differentiation in H. malabaricus, allowing to conclude that repetitive DNAs played an important role in the differentiation process. It was detected a cryptic differentiated XX/XY sex chromosome system in karyomorph C, which is clearly correlated with the evolution of the X1X1X2X2/X1X2Y sex chromosome system of karyomorph D. The cytogenetic mapping of five classes of repetitive DNAs also indicated the probable derivation of the XX/XY chromosomes of karyomorph B from autosomal chromosomes of karyomorph A. In this case, the X chromosomes were seen as the preferred site for the accumulation of DNA repeats, which represents an unusual condition of X accumulating more repetitive DNAs than Y chromosome in fish. The overall results were able to demonstrate that the repetitive DNA fraction of the genome constitutes good evolutionary markers in H. malabaricus, allowing to improve the understanding of the evolutionary mechanisms that have generated the complex genomic structure found in this fish group.
publishDate 2010
dc.date.available.fl_str_mv 2010-02-10
2016-06-02T20:21:23Z
dc.date.issued.fl_str_mv 2010-02-08
dc.date.accessioned.fl_str_mv 2016-06-02T20:21:23Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv CIOFFI, Marcelo de Bello. Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos. 2010. 200 f. Dissertação (Mestrado em Ciências Biológicas) - Universidade Federal de São Carlos, São Carlos, 2010.
dc.identifier.uri.fl_str_mv https://repositorio.ufscar.br/handle/ufscar/5467
identifier_str_mv CIOFFI, Marcelo de Bello. Marcadores cromossômicos em Hoplias malabaricus (Characiformes, Erythrinidae). Citogenética comparativa entre cariomorfos. 2010. 200 f. Dissertação (Mestrado em Ciências Biológicas) - Universidade Federal de São Carlos, São Carlos, 2010.
url https://repositorio.ufscar.br/handle/ufscar/5467
dc.language.iso.fl_str_mv por
language por
dc.relation.confidence.fl_str_mv -1
-1
dc.relation.authority.fl_str_mv dd82edf4-2e72-469b-a8e7-af7ff7b1c1a7
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de São Carlos
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Genética Evolutiva e Biologia Molecular - PPGGEv
dc.publisher.initials.fl_str_mv UFSCar
dc.publisher.country.fl_str_mv BR
publisher.none.fl_str_mv Universidade Federal de São Carlos
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFSCAR
instname:Universidade Federal de São Carlos (UFSCAR)
instacron:UFSCAR
instname_str Universidade Federal de São Carlos (UFSCAR)
instacron_str UFSCAR
institution UFSCAR
reponame_str Repositório Institucional da UFSCAR
collection Repositório Institucional da UFSCAR
bitstream.url.fl_str_mv https://repositorio.ufscar.br/bitstream/ufscar/5467/1/2776.pdf
https://repositorio.ufscar.br/bitstream/ufscar/5467/2/2776.pdf.jpg
bitstream.checksum.fl_str_mv a61411c472576ea726a39ea95c16ca39
8110bf524471da4ec14f4119f42c3e61
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
repository.name.fl_str_mv Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)
repository.mail.fl_str_mv
_version_ 1802136285693870080