Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945

Detalhes bibliográficos
Autor(a) principal: Fonseca, Débora Faria
Data de Publicação: 2008
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFSCAR
Texto Completo: https://repositorio.ufscar.br/handle/ufscar/6942
Resumo: The Gram-positive genus Bacillus is of great biotechnological importance. Their ability to secrete enzymes efficiently during fermentation is exploited for the production of extracellular enzymes such as penicillin G acylase (PGA). Bacillus megaterium has proven to be an excellent alternative host to Escherichia coli for heterologous gene expression. Unlike other bacilli strains, proteolytic degradation by alkaline proteases is avoided. In addition, there are no endotoxins found in the cell wall. As a result, protein yields are exceptionally high even if inexpensive substrates are used. In this work, the growth conditions of B. megaterium ATCC 14945 and its preparation for transformation by electroporation with plasmid DNA had been studied. Vegetative cells and protoplasts of B. megaterium had been used. Plasmid DNAs (pET- 32, pETduet-1, pBR322 and pHis 1522) were prepared from E. coli strains DH5α and BL21. Bacteria cultures were growth in Luria-Bertani (LB) broth, Nutrient or LBS (LB containing 0,5 M sorbitol) medium. It had been used the following Electroporation Media: 25% PEG 6000/0.1 M Sorbitol (Moro et al., 1995), 0.625 M Sacarose/1.0 mM MgCl2, pH 5.5 (Dunny et al., 1991), HEPES 10 mM, pH 7.0 (Belliveau & Trevors, 1989) and SMG (0.5 M sorbitol, 0.5 M manitol and 10% glicerol) (Xue et al., 1999). As Recovery Media after electric pulses, LB and LBSM (LB containing 0,5 M sorbitol and 0.38 M manitol) had been used. Extractions of genomic DNA of B. megaterium and plasmid DNA of E. coli had been carried through. The Colonies Forming Units method (CFU) was applied in order to analyze the B. megaterium viability before and after treatment with Electroporation Media. The biomass produced (Cx) was analyzed spectrophotometrically and by the Dry Mass method. The morphology and pureness of B. megaterium cultures had been studied by optic microscopy preparations and B. megaterium growth in liquid selective media. The best electric conditions for electroporation had been established by preliminary tests. B. megaterium transformations was performed according to protocols described by Moro et al. (1995), Dunny et al. (1991), Belliveau & Trevors (1989), Xue et al. (1999) and Romero et al. (2006). The B. megaterium growth curves in LB, Nutrient and LBS had allowed the identification of growth phases of cultures and the respective electric conditions adjustment for electroporation protocols. The cellular concentration (dry mass) found for 16 hours of culture in Nutrient, LB and LBS medium had been 1.900 g/L, 2.649 g/L and 2.320 g/L, respectively. The viable cells concentration analyses (UFC) had allowed the adjustment of plasmid DNA concentrations employed and transformation efficiencies calculation. It had been found the following cellular densities of B. megaterium grown in Nutrient, LB and LBS medium respectively after PEG/Sorbitol Electroporation Medium treatment: 8.8 x 108; 9,2 x 108 and 2.3 x 109 UFC/mL. For Sacarose/MgCl2, it had been found 2,8 x 107; 4.6 x 108 and 3.7 x 108 UFC/mL and for HEPES 5.6 x 108; 2.93 x 109 and 1.86 x 108. For SMG, it had been found 1,7 x 109; 9.4 x 109 and 1.1 x 1010 UFC/mL for Nutrient, LB and LBS medium, respectively.
id SCAR_413180858c525264ce28ab6a9996b7b7
oai_identifier_str oai:repositorio.ufscar.br:ufscar/6942
network_acronym_str SCAR
network_name_str Repositório Institucional da UFSCAR
repository_id_str 4322
spelling Fonseca, Débora FariaGiordano, Raquel de Lima Camargohttp://genos.cnpq.br:12010/dwlattes/owa/prc_imp_cv_int?f_cod=K4780181P0http://lattes.cnpq.br/439198442506536309a05460-66dd-4c3a-9ae7-6fae7ddebec82016-08-17T18:39:28Z2008-06-122016-08-17T18:39:28Z2008-03-28FONSECA, Débora Faria. Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945. 2008. 114 f. Dissertação (Mestrado em Multidisciplinar) - Universidade Federal de São Carlos, São Carlos, 2008.https://repositorio.ufscar.br/handle/ufscar/6942The Gram-positive genus Bacillus is of great biotechnological importance. Their ability to secrete enzymes efficiently during fermentation is exploited for the production of extracellular enzymes such as penicillin G acylase (PGA). Bacillus megaterium has proven to be an excellent alternative host to Escherichia coli for heterologous gene expression. Unlike other bacilli strains, proteolytic degradation by alkaline proteases is avoided. In addition, there are no endotoxins found in the cell wall. As a result, protein yields are exceptionally high even if inexpensive substrates are used. In this work, the growth conditions of B. megaterium ATCC 14945 and its preparation for transformation by electroporation with plasmid DNA had been studied. Vegetative cells and protoplasts of B. megaterium had been used. Plasmid DNAs (pET- 32, pETduet-1, pBR322 and pHis 1522) were prepared from E. coli strains DH5α and BL21. Bacteria cultures were growth in Luria-Bertani (LB) broth, Nutrient or LBS (LB containing 0,5 M sorbitol) medium. It had been used the following Electroporation Media: 25% PEG 6000/0.1 M Sorbitol (Moro et al., 1995), 0.625 M Sacarose/1.0 mM MgCl2, pH 5.5 (Dunny et al., 1991), HEPES 10 mM, pH 7.0 (Belliveau & Trevors, 1989) and SMG (0.5 M sorbitol, 0.5 M manitol and 10% glicerol) (Xue et al., 1999). As Recovery Media after electric pulses, LB and LBSM (LB containing 0,5 M sorbitol and 0.38 M manitol) had been used. Extractions of genomic DNA of B. megaterium and plasmid DNA of E. coli had been carried through. The Colonies Forming Units method (CFU) was applied in order to analyze the B. megaterium viability before and after treatment with Electroporation Media. The biomass produced (Cx) was analyzed spectrophotometrically and by the Dry Mass method. The morphology and pureness of B. megaterium cultures had been studied by optic microscopy preparations and B. megaterium growth in liquid selective media. The best electric conditions for electroporation had been established by preliminary tests. B. megaterium transformations was performed according to protocols described by Moro et al. (1995), Dunny et al. (1991), Belliveau & Trevors (1989), Xue et al. (1999) and Romero et al. (2006). The B. megaterium growth curves in LB, Nutrient and LBS had allowed the identification of growth phases of cultures and the respective electric conditions adjustment for electroporation protocols. The cellular concentration (dry mass) found for 16 hours of culture in Nutrient, LB and LBS medium had been 1.900 g/L, 2.649 g/L and 2.320 g/L, respectively. The viable cells concentration analyses (UFC) had allowed the adjustment of plasmid DNA concentrations employed and transformation efficiencies calculation. It had been found the following cellular densities of B. megaterium grown in Nutrient, LB and LBS medium respectively after PEG/Sorbitol Electroporation Medium treatment: 8.8 x 108; 9,2 x 108 and 2.3 x 109 UFC/mL. For Sacarose/MgCl2, it had been found 2,8 x 107; 4.6 x 108 and 3.7 x 108 UFC/mL and for HEPES 5.6 x 108; 2.93 x 109 and 1.86 x 108. For SMG, it had been found 1,7 x 109; 9.4 x 109 and 1.1 x 1010 UFC/mL for Nutrient, LB and LBS medium, respectively.Bacillus são bactérias Gram-positivas de grande importância biotecnológica. Sua habilidade para secretar enzimas eficientemente durante a fermentação é utilizada para a produção de enzimas extracelulares como penicilina G acilase (PGA). Bacillus megaterium revelou-se excelente hospedeiro alternativo à Escherichia coli para a expressão de genes heterólogos. Diferentemente de outras linhagens de bacilos, a degradação proteolítica por alcalino-proteases não é verificada. Além disso, não são encontradas endotoxinas em sua parede celular. Consequentemente, os rendimentos de produção de proteínas são excepcionalmente elevados, ainda que substratos econômicos sejam utilizados. Neste trabalho, foram estudadas as condições de crescimento de células de B. megaterium e sua preparação para transformação por eletroporação com DNA plasmidial. Foram utilizadas células vegetativas e protoplastos de B. megaterium ATCC 14945 e as linhagens de E. coli DH5α e BL21 (para amplificação e manutenção dos plasmídeos pET-32, pETduet-1, pBR322 e pHis 1522). Os meios de crescimento empregados foram Nutriente, Luria-Bertani (LB) e LBS (LB contendo 0,5 M sorbitol). Para as eletroporações, foram utilizados os Meios 25% PEG 6000/0,1 M Sorbitol (Moro et al., 1995), 0,625 M Sacarose/1,0 mM MgCl2, pH 5,5 (Dunny et al., 1991), HEPES 10 mM, pH 7,0 (Belliveau & Trevors, 1989) e SMG (0,5 M de sorbitol, 0,5 M de manitol e 10% de glicerol) (Xue et al., 1999). Como Meios de Recuperação pós-pulso elétrico, foram utilizados os Meios LB e LBSM (LB contendo 0,5 M de sorbitol e 0,38 M de manitol). Foram realizadas extrações de DNA genômico de B. megaterium e de DNA plasmidial de E. coli; ensaios de viabilidade das células de B. megaterium antes e após tratamento com os diferentes Meios de Eletroporação, pelo Método de Contagem de Unidades Formadoras de Colônias (UFC); quantificação de biomassa produzida (Cx) nos cultivos de B. megaterium nos diferentes Meios, pelo Método da Massa Seca, e acompanhamento por leitura espectrofotométrica (DO 600 nm); análise morfológica e de pureza dos cultivos por meio de preparações permanentes e a fresco e do crescimento de B. megaterium selvagem em diferentes meios seletivos; testes preliminares de eletroporação para estabelecimento das melhores condições elétricas; ensaios de eletroporação segundo os protocolos de Moro et al. (1995), Dunny et al. (1991), Belliveau & Trevors (1989), Xue et al. (1999) e Romero et al. (2006). Foram obtidas as curvas de crescimento de B. megaterium para os Meios de Cultivo Nutriente, LB e LBS. Tais curvas permitiram a identificação da fase de crescimento das culturas e o respectivo ajuste das condições elétricas para os protocolos de eletroporação. As medidas de concentração celular (massa seca) encontradas para 16 horas de cultivo, para culturas crescidas em Meio Nutriente, LB e LBS foram 1,900 g/L, 2,649 g/L e 2,320 g/L, respectivamente. As análises de concentração de células viáveis (UFC) forneceram a densidade celular após tratamento com os diferentes Meios de Eletroporação, de modo a permitir o ajuste das concentrações de DNA plasmidial a serem empregadas e o cálculo das eficiências de transformação. Após o tratamento de células de B. megaterium, crescidas em Meio Nutriente, LB e LBS, com o Meio de Eletroporação PEG/Sorbitol, foram obtidas, respectivamente: 8,8 x 108; 9,2 x 108 e 2,3 x 109 UFC/mL; para o Meio de Eletroporação Sacarose/MgCl2, 2,8 x 107; 4,6 x 108 e 3,7 x 108 UFC/mL; para o Meio de Eletroporação HEPES, 5,6 x 108; 2,93 x 109 e 1,86 x 108; para o Meio de Eletroporação SMG, 1,7 x 109; 9,4 x 109 e 1,1 x 1010 UFC/mL, respectivamente para os Meios de Crescimento Nutriente, LB e LBS.Financiadora de Estudos e Projetosapplication/pdfporUniversidade Federal de São CarlosPrograma de Pós-Graduação em Biotecnologia - PPGBiotecUFSCarBRBiologia molecularBactérias - transformaçãoEletroporaçãoBacillus megateriumCIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAREstudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis-1-187b60e6c-591e-4a38-94f3-e75e2beebea0info:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFSCARinstname:Universidade Federal de São Carlos (UFSCAR)instacron:UFSCARORIGINAL1828.pdfapplication/pdf1894013https://repositorio.ufscar.br/bitstream/ufscar/6942/1/1828.pdf47084c725e570d01b5c72cabdaeed953MD51TEXT1828.pdf.txt1828.pdf.txtExtracted texttext/plain176427https://repositorio.ufscar.br/bitstream/ufscar/6942/2/1828.pdf.txt8d7dd0184c630f40f6945f527e7b8f05MD52THUMBNAIL1828.pdf.jpg1828.pdf.jpgIM Thumbnailimage/jpeg5802https://repositorio.ufscar.br/bitstream/ufscar/6942/3/1828.pdf.jpg4eec1816c6e350846dda1ba15e384f8eMD53ufscar/69422023-09-18 18:30:33.006oai:repositorio.ufscar.br:ufscar/6942Repositório InstitucionalPUBhttps://repositorio.ufscar.br/oai/requestopendoar:43222023-09-18T18:30:33Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)false
dc.title.por.fl_str_mv Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945
title Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945
spellingShingle Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945
Fonseca, Débora Faria
Biologia molecular
Bactérias - transformação
Eletroporação
Bacillus megaterium
CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
title_short Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945
title_full Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945
title_fullStr Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945
title_full_unstemmed Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945
title_sort Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945
author Fonseca, Débora Faria
author_facet Fonseca, Débora Faria
author_role author
dc.contributor.authorlattes.por.fl_str_mv http://lattes.cnpq.br/4391984425065363
dc.contributor.author.fl_str_mv Fonseca, Débora Faria
dc.contributor.advisor1.fl_str_mv Giordano, Raquel de Lima Camargo
dc.contributor.advisor1Lattes.fl_str_mv http://genos.cnpq.br:12010/dwlattes/owa/prc_imp_cv_int?f_cod=K4780181P0
dc.contributor.authorID.fl_str_mv 09a05460-66dd-4c3a-9ae7-6fae7ddebec8
contributor_str_mv Giordano, Raquel de Lima Camargo
dc.subject.por.fl_str_mv Biologia molecular
Bactérias - transformação
Eletroporação
Bacillus megaterium
topic Biologia molecular
Bactérias - transformação
Eletroporação
Bacillus megaterium
CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
description The Gram-positive genus Bacillus is of great biotechnological importance. Their ability to secrete enzymes efficiently during fermentation is exploited for the production of extracellular enzymes such as penicillin G acylase (PGA). Bacillus megaterium has proven to be an excellent alternative host to Escherichia coli for heterologous gene expression. Unlike other bacilli strains, proteolytic degradation by alkaline proteases is avoided. In addition, there are no endotoxins found in the cell wall. As a result, protein yields are exceptionally high even if inexpensive substrates are used. In this work, the growth conditions of B. megaterium ATCC 14945 and its preparation for transformation by electroporation with plasmid DNA had been studied. Vegetative cells and protoplasts of B. megaterium had been used. Plasmid DNAs (pET- 32, pETduet-1, pBR322 and pHis 1522) were prepared from E. coli strains DH5α and BL21. Bacteria cultures were growth in Luria-Bertani (LB) broth, Nutrient or LBS (LB containing 0,5 M sorbitol) medium. It had been used the following Electroporation Media: 25% PEG 6000/0.1 M Sorbitol (Moro et al., 1995), 0.625 M Sacarose/1.0 mM MgCl2, pH 5.5 (Dunny et al., 1991), HEPES 10 mM, pH 7.0 (Belliveau & Trevors, 1989) and SMG (0.5 M sorbitol, 0.5 M manitol and 10% glicerol) (Xue et al., 1999). As Recovery Media after electric pulses, LB and LBSM (LB containing 0,5 M sorbitol and 0.38 M manitol) had been used. Extractions of genomic DNA of B. megaterium and plasmid DNA of E. coli had been carried through. The Colonies Forming Units method (CFU) was applied in order to analyze the B. megaterium viability before and after treatment with Electroporation Media. The biomass produced (Cx) was analyzed spectrophotometrically and by the Dry Mass method. The morphology and pureness of B. megaterium cultures had been studied by optic microscopy preparations and B. megaterium growth in liquid selective media. The best electric conditions for electroporation had been established by preliminary tests. B. megaterium transformations was performed according to protocols described by Moro et al. (1995), Dunny et al. (1991), Belliveau & Trevors (1989), Xue et al. (1999) and Romero et al. (2006). The B. megaterium growth curves in LB, Nutrient and LBS had allowed the identification of growth phases of cultures and the respective electric conditions adjustment for electroporation protocols. The cellular concentration (dry mass) found for 16 hours of culture in Nutrient, LB and LBS medium had been 1.900 g/L, 2.649 g/L and 2.320 g/L, respectively. The viable cells concentration analyses (UFC) had allowed the adjustment of plasmid DNA concentrations employed and transformation efficiencies calculation. It had been found the following cellular densities of B. megaterium grown in Nutrient, LB and LBS medium respectively after PEG/Sorbitol Electroporation Medium treatment: 8.8 x 108; 9,2 x 108 and 2.3 x 109 UFC/mL. For Sacarose/MgCl2, it had been found 2,8 x 107; 4.6 x 108 and 3.7 x 108 UFC/mL and for HEPES 5.6 x 108; 2.93 x 109 and 1.86 x 108. For SMG, it had been found 1,7 x 109; 9.4 x 109 and 1.1 x 1010 UFC/mL for Nutrient, LB and LBS medium, respectively.
publishDate 2008
dc.date.available.fl_str_mv 2008-06-12
2016-08-17T18:39:28Z
dc.date.issued.fl_str_mv 2008-03-28
dc.date.accessioned.fl_str_mv 2016-08-17T18:39:28Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv FONSECA, Débora Faria. Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945. 2008. 114 f. Dissertação (Mestrado em Multidisciplinar) - Universidade Federal de São Carlos, São Carlos, 2008.
dc.identifier.uri.fl_str_mv https://repositorio.ufscar.br/handle/ufscar/6942
identifier_str_mv FONSECA, Débora Faria. Estudo das condições de cultivo e de eletrocompetência para a transformação de Bacillus megaterium ATCC 14945. 2008. 114 f. Dissertação (Mestrado em Multidisciplinar) - Universidade Federal de São Carlos, São Carlos, 2008.
url https://repositorio.ufscar.br/handle/ufscar/6942
dc.language.iso.fl_str_mv por
language por
dc.relation.confidence.fl_str_mv -1
-1
dc.relation.authority.fl_str_mv 87b60e6c-591e-4a38-94f3-e75e2beebea0
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de São Carlos
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Biotecnologia - PPGBiotec
dc.publisher.initials.fl_str_mv UFSCar
dc.publisher.country.fl_str_mv BR
publisher.none.fl_str_mv Universidade Federal de São Carlos
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFSCAR
instname:Universidade Federal de São Carlos (UFSCAR)
instacron:UFSCAR
instname_str Universidade Federal de São Carlos (UFSCAR)
instacron_str UFSCAR
institution UFSCAR
reponame_str Repositório Institucional da UFSCAR
collection Repositório Institucional da UFSCAR
bitstream.url.fl_str_mv https://repositorio.ufscar.br/bitstream/ufscar/6942/1/1828.pdf
https://repositorio.ufscar.br/bitstream/ufscar/6942/2/1828.pdf.txt
https://repositorio.ufscar.br/bitstream/ufscar/6942/3/1828.pdf.jpg
bitstream.checksum.fl_str_mv 47084c725e570d01b5c72cabdaeed953
8d7dd0184c630f40f6945f527e7b8f05
4eec1816c6e350846dda1ba15e384f8e
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
repository.name.fl_str_mv Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)
repository.mail.fl_str_mv
_version_ 1813715555147841536