Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes

Detalhes bibliográficos
Autor(a) principal: Oliveira, Gabriela de
Data de Publicação: 2019
Tipo de documento: Tese
Idioma: por
Título da fonte: Repositório Institucional da UFSCAR
Texto Completo: https://repositorio.ufscar.br/handle/ufscar/11298
Resumo: Firefly luciferases have been extensively used as bioanalytical reagents and their cDNAs as reporter genes and bioimaging biosensors. Luciferases of fireflies, “rail-road” worm and "tec-tec" beetles, have different characteristics of thermostability, kinetics and spectrum of bioluminescence, being able to offer alternatives to increase the applications of these enzymes. However, most of these enzymes are unstable at temperatures above 30 ° C, and firefly luciferases exhibit bioluminescence spectra sensitive to temperature. In this thesis, we conducted an extensive study of the effect of temperature on the stability and bioluminescence spectra of recombinant luciferases from Brazilian bioluminescent beetles, and we used site-directed mutagenesis to increase the thermostability of red-light-emitting luciferase from Phrixotrix hirtus. The most thermostable luciferases were the ones that emitted the most shifted light to the blue within each family: that of the Elateridae Pyrearinus termitilluminans (534 nm), that of the Phengodidae Phrixotrix vivianii (546 nm) and that of the Lampyridae Amydetes vivianii (538 nm), confirming that emitting luciferases in the region from green to blue are more stable. All the pH-sensitive luciferases of fireflies studied here presented sensitivity of the bioluminescence spectrum to temperature. The luciferases with the most displaced bioluminescence spectrum for blue were also less temperature sensitive in the following order: Amydetes <Cratomorphus <Photinus <Macrolampis. It was also possible to verify the existence of a linear relationship between temperature and light intensity ratio in the green and red regions, which allow quantifying raciometrically the temperature using these luciferases. Finally, P. hirtus red light-emitting luciferase was resistant to stabilization by site-directed mutagenesis, only N351E and R353E showed slightly higher thermostability than the wild-type enzyme, preserving the same bioluminescence spectrum. The results suggest that this red light-emitting luciferase is very flexible, requiring considerable engineering to stabilize it.
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spelling Oliveira, Gabriela deViviani, Vadimhttp://lattes.cnpq.br/3942043373510668http://lattes.cnpq.br/15398411078674622019-04-23T18:26:46Z2019-04-23T18:26:46Z2019-03-22OLIVEIRA, Gabriela de. Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes. 2019. Tese (Doutorado em Genética Evolutiva e Biologia Molecular) – Universidade Federal de São Carlos, São Carlos, 2019. Disponível em: https://repositorio.ufscar.br/handle/ufscar/11298.https://repositorio.ufscar.br/handle/ufscar/11298Firefly luciferases have been extensively used as bioanalytical reagents and their cDNAs as reporter genes and bioimaging biosensors. Luciferases of fireflies, “rail-road” worm and "tec-tec" beetles, have different characteristics of thermostability, kinetics and spectrum of bioluminescence, being able to offer alternatives to increase the applications of these enzymes. However, most of these enzymes are unstable at temperatures above 30 ° C, and firefly luciferases exhibit bioluminescence spectra sensitive to temperature. In this thesis, we conducted an extensive study of the effect of temperature on the stability and bioluminescence spectra of recombinant luciferases from Brazilian bioluminescent beetles, and we used site-directed mutagenesis to increase the thermostability of red-light-emitting luciferase from Phrixotrix hirtus. The most thermostable luciferases were the ones that emitted the most shifted light to the blue within each family: that of the Elateridae Pyrearinus termitilluminans (534 nm), that of the Phengodidae Phrixotrix vivianii (546 nm) and that of the Lampyridae Amydetes vivianii (538 nm), confirming that emitting luciferases in the region from green to blue are more stable. All the pH-sensitive luciferases of fireflies studied here presented sensitivity of the bioluminescence spectrum to temperature. The luciferases with the most displaced bioluminescence spectrum for blue were also less temperature sensitive in the following order: Amydetes <Cratomorphus <Photinus <Macrolampis. It was also possible to verify the existence of a linear relationship between temperature and light intensity ratio in the green and red regions, which allow quantifying raciometrically the temperature using these luciferases. Finally, P. hirtus red light-emitting luciferase was resistant to stabilization by site-directed mutagenesis, only N351E and R353E showed slightly higher thermostability than the wild-type enzyme, preserving the same bioluminescence spectrum. The results suggest that this red light-emitting luciferase is very flexible, requiring considerable engineering to stabilize it.Luciferases de vagalumes tem sido extensivamente utilizadas como reagentes bioanalíticos e os seus cDNAs como genes repórteres e biosensores para bioimagem. Luciferases de vagalumes, larvas “trenzinho” e besouros “tec-tec”, possuem características de termoestabilidade, cinética e espectro de bioluminescência diferenciados, podendo oferecer alternativas para aumentar as aplicações destas enzimas. Entretanto, a maioria destas enzimas são instáveis em temperaturas acima de 30°C, e as luciferases de vagalumes apresentam espectros de bioluminescência sensíveis a temperatura. Nesta tese, realizamos um amplo estudo do efeito da temperatura na estabilidade e espectros de bioluminescência de luciferases recombinantes de besouros bioluminescentes brasileiros, e usamos mutagênese sítio-dirigida para aumentar a termoestabilidade da luciferase emissora de luz vermelha de Phrixotrix hirtus. As luciferases mais termoestáveis foram as que emitem luz mais deslocada para o azul dentro de cada família: a do elaterídeo Pyrearinus termitilluminans (534 nm), aquela do fengodídeo Phrixotrix vivianii (546 nm) e aquela do lampirídeo Amydetes vivianii (538 nm), confirmando que luciferases emissoras na região do verde ao azul são mais estáveis. Todas as luciferases pH-sensitivas de vagalumes estudadas aqui, apresentaram sensibilidade do espectro de bioluminescência à temperatura. As luciferases com o espectro de bioluminescência mais deslocado para o azul, também foram menos sensíveis a temperatura, na seguinte ordem: Amydetes< Cratomorphus< Photinus< Macrolampis. Também foi possível averiguar a existência de uma relação linear entre temperatura e razão de intensidade de luz nas regiões do verde e vermelho, que permitem quantificar raciometricamente a temperatura usando estas luciferases. Finalmente, a luciferase emissora de luz vermelha de P. hirtus mostrou-se refratária à estabilização por mutagênese sítio-dirigida, apenas N351E e R353E apresentaram termoestabilidade ligeiramente maior do que a enzima selvagem, preservando o mesmo espectro de bioluminescência. Os resultados sugerem que esta luciferase emissora de luz vermelha seja muito flexível, requerendo uma engenharia considerável para estabilizá-la.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)CAPES: Código de Financiamento 001FAPESP: 2015/05949-4porUniversidade Federal de São CarlosCâmpus São CarlosPrograma de Pós-Graduação em Genética Evolutiva e Biologia Molecular - PPGGEvUFSCarBioluminescênciaLuciferases pH- sensitivasLuciferases pH-insensitivasTermoestabilidadeCurva raciométricaBioluminescencepH-sensitive luciferasespH-insensitive luciferasesThermostabilityRatiometric curveCIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULARCIENCIAS BIOLOGICAS::BIOQUIMICA::ENZIMOLOGIAEstudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentesComparative study of the effect of temperature in the stability and bioluminescence spectra of the luciferases of Phrixotrix hirtus and other bioluminescent beetlesinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisOnlineinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFSCARinstname:Universidade Federal de São Carlos (UFSCAR)instacron:UFSCARORIGINAL03-04-2019 - Tese_Gabriela_Oliveira_versão Final.pdf03-04-2019 - Tese_Gabriela_Oliveira_versão Final.pdfapplication/pdf2779464https://{{ getenv "DSPACE_HOST" "repositorio.ufscar.br" }}/bitstream/ufscar/11298/3/03-04-2019%20-%20Tese_Gabriela_Oliveira_vers%c3%a3o%20Final.pdff25dc7cb138c075cf7a10a1f61d44152MD53LICENSElicense.txtlicense.txttext/plain; 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dc.title.por.fl_str_mv Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes
dc.title.alternative.eng.fl_str_mv Comparative study of the effect of temperature in the stability and bioluminescence spectra of the luciferases of Phrixotrix hirtus and other bioluminescent beetles
title Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes
spellingShingle Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes
Oliveira, Gabriela de
Bioluminescência
Luciferases pH- sensitivas
Luciferases pH-insensitivas
Termoestabilidade
Curva raciométrica
Bioluminescence
pH-sensitive luciferases
pH-insensitive luciferases
Thermostability
Ratiometric curve
CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
CIENCIAS BIOLOGICAS::BIOQUIMICA::ENZIMOLOGIA
title_short Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes
title_full Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes
title_fullStr Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes
title_full_unstemmed Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes
title_sort Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes
author Oliveira, Gabriela de
author_facet Oliveira, Gabriela de
author_role author
dc.contributor.authorlattes.por.fl_str_mv http://lattes.cnpq.br/1539841107867462
dc.contributor.author.fl_str_mv Oliveira, Gabriela de
dc.contributor.advisor1.fl_str_mv Viviani, Vadim
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/3942043373510668
contributor_str_mv Viviani, Vadim
dc.subject.por.fl_str_mv Bioluminescência
Luciferases pH- sensitivas
Luciferases pH-insensitivas
Termoestabilidade
Curva raciométrica
topic Bioluminescência
Luciferases pH- sensitivas
Luciferases pH-insensitivas
Termoestabilidade
Curva raciométrica
Bioluminescence
pH-sensitive luciferases
pH-insensitive luciferases
Thermostability
Ratiometric curve
CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
CIENCIAS BIOLOGICAS::BIOQUIMICA::ENZIMOLOGIA
dc.subject.eng.fl_str_mv Bioluminescence
pH-sensitive luciferases
pH-insensitive luciferases
Thermostability
Ratiometric curve
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
CIENCIAS BIOLOGICAS::BIOQUIMICA::ENZIMOLOGIA
description Firefly luciferases have been extensively used as bioanalytical reagents and their cDNAs as reporter genes and bioimaging biosensors. Luciferases of fireflies, “rail-road” worm and "tec-tec" beetles, have different characteristics of thermostability, kinetics and spectrum of bioluminescence, being able to offer alternatives to increase the applications of these enzymes. However, most of these enzymes are unstable at temperatures above 30 ° C, and firefly luciferases exhibit bioluminescence spectra sensitive to temperature. In this thesis, we conducted an extensive study of the effect of temperature on the stability and bioluminescence spectra of recombinant luciferases from Brazilian bioluminescent beetles, and we used site-directed mutagenesis to increase the thermostability of red-light-emitting luciferase from Phrixotrix hirtus. The most thermostable luciferases were the ones that emitted the most shifted light to the blue within each family: that of the Elateridae Pyrearinus termitilluminans (534 nm), that of the Phengodidae Phrixotrix vivianii (546 nm) and that of the Lampyridae Amydetes vivianii (538 nm), confirming that emitting luciferases in the region from green to blue are more stable. All the pH-sensitive luciferases of fireflies studied here presented sensitivity of the bioluminescence spectrum to temperature. The luciferases with the most displaced bioluminescence spectrum for blue were also less temperature sensitive in the following order: Amydetes <Cratomorphus <Photinus <Macrolampis. It was also possible to verify the existence of a linear relationship between temperature and light intensity ratio in the green and red regions, which allow quantifying raciometrically the temperature using these luciferases. Finally, P. hirtus red light-emitting luciferase was resistant to stabilization by site-directed mutagenesis, only N351E and R353E showed slightly higher thermostability than the wild-type enzyme, preserving the same bioluminescence spectrum. The results suggest that this red light-emitting luciferase is very flexible, requiring considerable engineering to stabilize it.
publishDate 2019
dc.date.accessioned.fl_str_mv 2019-04-23T18:26:46Z
dc.date.available.fl_str_mv 2019-04-23T18:26:46Z
dc.date.issued.fl_str_mv 2019-03-22
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
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status_str publishedVersion
dc.identifier.citation.fl_str_mv OLIVEIRA, Gabriela de. Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes. 2019. Tese (Doutorado em Genética Evolutiva e Biologia Molecular) – Universidade Federal de São Carlos, São Carlos, 2019. Disponível em: https://repositorio.ufscar.br/handle/ufscar/11298.
dc.identifier.uri.fl_str_mv https://repositorio.ufscar.br/handle/ufscar/11298
identifier_str_mv OLIVEIRA, Gabriela de. Estudo comparativo do efeito da temperatura na estabilidade e espectros de bioluminescência das luciferases de Phrixotrix hirtus e outros besouros bioluminescentes. 2019. Tese (Doutorado em Genética Evolutiva e Biologia Molecular) – Universidade Federal de São Carlos, São Carlos, 2019. Disponível em: https://repositorio.ufscar.br/handle/ufscar/11298.
url https://repositorio.ufscar.br/handle/ufscar/11298
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Universidade Federal de São Carlos
Câmpus São Carlos
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Genética Evolutiva e Biologia Molecular - PPGGEv
dc.publisher.initials.fl_str_mv UFSCar
publisher.none.fl_str_mv Universidade Federal de São Carlos
Câmpus São Carlos
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFSCAR
instname:Universidade Federal de São Carlos (UFSCAR)
instacron:UFSCAR
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instacron_str UFSCAR
institution UFSCAR
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