Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae)
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Tipo de documento: | Tese |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFSCAR |
Texto Completo: | https://repositorio.ufscar.br/handle/ufscar/13227 |
Resumo: | Astyanax is a fish genus of Characiformes and currently is classified as incertae sedis. Astyanax scabripinnis, one of these species, is recognized as a species complex, which is composed of 33 species. This study propose to investigate karyotypic constitution of species of this complex, throughout classical and molecular analyzes: conventional Giemsa staining, C-banding, impregnation with silver nitrate and fluorescence in situ hybridization (FISH) with different repetitive DNA probes (rDNA 5S, rDNA 18S, As51, snRNA U2, H3, H4, Rex1, Rex3, telomeric sequence and microsatellites in three species from different rivers basins: 1) Astyanax aff. scabripinnis (Alto rio Paraná); 2) Astyanax cf. intermedius (Paraíba do Sul); 3) Astyanax cf. goyanensis (Tocantins). For the latter, two units were observed occurring in sympatry, and then the presence of two karyomorphs (A and B) was considered. The analyzes showed that the species have some conserved chromosomal characteristics, such as 2n=50 chromosomes, telomeric sites and chromosomal distribution pattern of repetitive elements Rex1 and Rex3. However, the presence of variable chromosomal characters stands out among the species, showing diversity regarding chromosomal morphology, C-banding pattern, number of sites and location of AgNORs, chromosomal distribution of repetitive DNAs (rDNA 18S and 5S, As51, snRNA U2, H3, H4 and microsatellites). These results demonstrate great diversification of the karyotypic microstructure of species of Astyanax scabripinnis complex and reinforce the biodiversity of the group. In addition, the data obtained has an important role in assisting the taxonomy and evolutionary biology of the group, since they reveal the presence of different units within the complex, which can be delimited with cytogenetic assistance, showing the occurrence of exclusive chromosomal characteristics of each species |
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Martinez, Juliana de FatimaMoreira Filho, Orlandohttp://lattes.cnpq.br/3927076022470557Artoni, Roberto Ferreirahttp://lattes.cnpq.br/8875928930712027http://lattes.cnpq.br/57844960900978518c52b2a6-190e-413f-963e-993c6bb482e02020-09-09T21:28:09Z2020-09-09T21:28:09Z2020-08-26MARTINEZ, Juliana de Fatima. Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae). 2020. Tese (Doutorado em Genética Evolutiva e Biologia Molecular) – Universidade Federal de São Carlos, São Carlos, 2020. Disponível em: https://repositorio.ufscar.br/handle/ufscar/13227.https://repositorio.ufscar.br/handle/ufscar/13227Astyanax is a fish genus of Characiformes and currently is classified as incertae sedis. Astyanax scabripinnis, one of these species, is recognized as a species complex, which is composed of 33 species. This study propose to investigate karyotypic constitution of species of this complex, throughout classical and molecular analyzes: conventional Giemsa staining, C-banding, impregnation with silver nitrate and fluorescence in situ hybridization (FISH) with different repetitive DNA probes (rDNA 5S, rDNA 18S, As51, snRNA U2, H3, H4, Rex1, Rex3, telomeric sequence and microsatellites in three species from different rivers basins: 1) Astyanax aff. scabripinnis (Alto rio Paraná); 2) Astyanax cf. intermedius (Paraíba do Sul); 3) Astyanax cf. goyanensis (Tocantins). For the latter, two units were observed occurring in sympatry, and then the presence of two karyomorphs (A and B) was considered. The analyzes showed that the species have some conserved chromosomal characteristics, such as 2n=50 chromosomes, telomeric sites and chromosomal distribution pattern of repetitive elements Rex1 and Rex3. However, the presence of variable chromosomal characters stands out among the species, showing diversity regarding chromosomal morphology, C-banding pattern, number of sites and location of AgNORs, chromosomal distribution of repetitive DNAs (rDNA 18S and 5S, As51, snRNA U2, H3, H4 and microsatellites). These results demonstrate great diversification of the karyotypic microstructure of species of Astyanax scabripinnis complex and reinforce the biodiversity of the group. In addition, the data obtained has an important role in assisting the taxonomy and evolutionary biology of the group, since they reveal the presence of different units within the complex, which can be delimited with cytogenetic assistance, showing the occurrence of exclusive chromosomal characteristics of each speciesAstyanax é um gênero de peixes pertencente à Characiformes, sendo atualmente classificado como incertae sedis. Dentre suas espécies encontra-se Astyanax scabripinnis, que é reconhecida como um complexo de espécies, o qual é composto por 33 espécies. Este estudo propôs-se a investigar a constituição cariotípica clássica e molecular de espécies desse complexo, através de análises de citogenética clássica e molecular: coloração convencional por Giemsa, bandamento C, impregnação por Nitrato de Prata e hibridizações in situ fluorescente (FISH) com diferentes sondas de DNA repetitivos (DNAr 5S, DNAr 18S, As51, snRNA U2, H3, H4, Rex1, Rex3, sequência telomérica e microssatélites) em três espécies de diferentes bacias hidrográficas: 1) Astyanax aff. scabripinnis (Alto rio Paraná); 2) Astyanax cf. intermedius (Paraíba do Sul); 3) Astyanax cf. goyanensis (Tocantins). Para esta última observou-se duas unidades ocorrendo em simpatria, sendo então considerada a presença de dois cariomorfos (A e B). As análises mostraram que as espécies possuem algumas características cromossômicas conservadas, como 2n=50 cromossomos, sítios teloméricos e padrão de distribuição cromossômica dos elementos repetitivos Rex1 e Rex3. Entretanto, a presença de caracteres cromossômicos variáveis se sobressai entre as espécies, mostrando diversidade no que se refere à morfologia cromossômica, padrão de bandamento C, número de sítios e localização de AgRONs, distribuição cromossômica de DNAs respetitivos (DNAr 18S e 5S, As51, snRNA U2, H3, H4 e microssatélites). Estes resultados demonstram grande diversificação da microestrutura cariotípica de espécies do complexo Astyanax scabripinnis e reforçam a biodiversidade existente no grupo. Além disso, os dados obtidos tem um importante papel no auxilio à taxonomia e biologia evolutiva do grupo, uma vez que revelam a presença de diferentes unidades dentro do complexo, as quais podem ser delimitadas com o auxílio citogenético, mostrando a ocorrência de características cromossômicas exclusivas de cada espécieNão recebi financiamentoporUniversidade Federal de São CarlosCâmpus São CarlosPrograma de Pós-Graduação em Genética Evolutiva e Biologia Molecular - PPGGEvUFSCarAttribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessCitogenética de peixesComplexo de espéciesMarcadores molecularesCIENCIAS BIOLOGICAS::GENETICACIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMALEstudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae)Classic and molecular chromosome studies in the Astyanax scabripinnis species complex (Characiformes, Characidae)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis60017fd1cc5-af61-44fe-9234-05523db3273creponame:Repositório Institucional da UFSCARinstname:Universidade Federal de São Carlos (UFSCAR)instacron:UFSCARORIGINALTese_Martinez JF_2020.pdfTese_Martinez JF_2020.pdfTese de doutoradoapplication/pdf4357772https://repositorio.ufscar.br/bitstream/ufscar/13227/1/Tese_Martinez%20JF_2020.pdf88e501bffe974eb853c13fc7c1cf3da8MD51carta-comprovante Martinez JF.doc.pdfcarta-comprovante Martinez JF.doc.pdfCarta comprovanteapplication/pdf210715https://repositorio.ufscar.br/bitstream/ufscar/13227/3/carta-comprovante%20Martinez%20JF.doc.pdf73639b530fd13f62aa77dd3916178810MD53CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8811https://repositorio.ufscar.br/bitstream/ufscar/13227/4/license_rdfe39d27027a6cc9cb039ad269a5db8e34MD54TEXTTese_Martinez JF_2020.pdf.txtTese_Martinez JF_2020.pdf.txtExtracted texttext/plain154102https://repositorio.ufscar.br/bitstream/ufscar/13227/5/Tese_Martinez%20JF_2020.pdf.txtdddd4daf268979d8a6dec7477ecf3c27MD55carta-comprovante Martinez JF.doc.pdf.txtcarta-comprovante Martinez JF.doc.pdf.txtExtracted texttext/plain1319https://repositorio.ufscar.br/bitstream/ufscar/13227/7/carta-comprovante%20Martinez%20JF.doc.pdf.txtcf64add2e9639dd109f3da45a2cd83ceMD57THUMBNAILTese_Martinez JF_2020.pdf.jpgTese_Martinez JF_2020.pdf.jpgIM Thumbnailimage/jpeg6856https://repositorio.ufscar.br/bitstream/ufscar/13227/6/Tese_Martinez%20JF_2020.pdf.jpgf61b955d140f005278c92cce0b8d8a4cMD56carta-comprovante Martinez JF.doc.pdf.jpgcarta-comprovante Martinez JF.doc.pdf.jpgIM Thumbnailimage/jpeg6446https://repositorio.ufscar.br/bitstream/ufscar/13227/8/carta-comprovante%20Martinez%20JF.doc.pdf.jpg2a32d115257339043775e82ded98bc62MD58ufscar/132272023-09-18 18:32:00.328oai:repositorio.ufscar.br:ufscar/13227Repositório InstitucionalPUBhttps://repositorio.ufscar.br/oai/requestopendoar:43222023-09-18T18:32Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)false |
dc.title.por.fl_str_mv |
Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae) |
dc.title.alternative.eng.fl_str_mv |
Classic and molecular chromosome studies in the Astyanax scabripinnis species complex (Characiformes, Characidae) |
title |
Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae) |
spellingShingle |
Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae) Martinez, Juliana de Fatima Citogenética de peixes Complexo de espécies Marcadores moleculares CIENCIAS BIOLOGICAS::GENETICA CIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMAL |
title_short |
Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae) |
title_full |
Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae) |
title_fullStr |
Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae) |
title_full_unstemmed |
Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae) |
title_sort |
Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae) |
author |
Martinez, Juliana de Fatima |
author_facet |
Martinez, Juliana de Fatima |
author_role |
author |
dc.contributor.authorlattes.por.fl_str_mv |
http://lattes.cnpq.br/5784496090097851 |
dc.contributor.author.fl_str_mv |
Martinez, Juliana de Fatima |
dc.contributor.advisor1.fl_str_mv |
Moreira Filho, Orlando |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/3927076022470557 |
dc.contributor.advisor-co1.fl_str_mv |
Artoni, Roberto Ferreira |
dc.contributor.advisor-co1Lattes.fl_str_mv |
http://lattes.cnpq.br/8875928930712027 |
dc.contributor.authorID.fl_str_mv |
8c52b2a6-190e-413f-963e-993c6bb482e0 |
contributor_str_mv |
Moreira Filho, Orlando Artoni, Roberto Ferreira |
dc.subject.por.fl_str_mv |
Citogenética de peixes Complexo de espécies Marcadores moleculares |
topic |
Citogenética de peixes Complexo de espécies Marcadores moleculares CIENCIAS BIOLOGICAS::GENETICA CIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMAL |
dc.subject.cnpq.fl_str_mv |
CIENCIAS BIOLOGICAS::GENETICA CIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMAL |
description |
Astyanax is a fish genus of Characiformes and currently is classified as incertae sedis. Astyanax scabripinnis, one of these species, is recognized as a species complex, which is composed of 33 species. This study propose to investigate karyotypic constitution of species of this complex, throughout classical and molecular analyzes: conventional Giemsa staining, C-banding, impregnation with silver nitrate and fluorescence in situ hybridization (FISH) with different repetitive DNA probes (rDNA 5S, rDNA 18S, As51, snRNA U2, H3, H4, Rex1, Rex3, telomeric sequence and microsatellites in three species from different rivers basins: 1) Astyanax aff. scabripinnis (Alto rio Paraná); 2) Astyanax cf. intermedius (Paraíba do Sul); 3) Astyanax cf. goyanensis (Tocantins). For the latter, two units were observed occurring in sympatry, and then the presence of two karyomorphs (A and B) was considered. The analyzes showed that the species have some conserved chromosomal characteristics, such as 2n=50 chromosomes, telomeric sites and chromosomal distribution pattern of repetitive elements Rex1 and Rex3. However, the presence of variable chromosomal characters stands out among the species, showing diversity regarding chromosomal morphology, C-banding pattern, number of sites and location of AgNORs, chromosomal distribution of repetitive DNAs (rDNA 18S and 5S, As51, snRNA U2, H3, H4 and microsatellites). These results demonstrate great diversification of the karyotypic microstructure of species of Astyanax scabripinnis complex and reinforce the biodiversity of the group. In addition, the data obtained has an important role in assisting the taxonomy and evolutionary biology of the group, since they reveal the presence of different units within the complex, which can be delimited with cytogenetic assistance, showing the occurrence of exclusive chromosomal characteristics of each species |
publishDate |
2020 |
dc.date.accessioned.fl_str_mv |
2020-09-09T21:28:09Z |
dc.date.available.fl_str_mv |
2020-09-09T21:28:09Z |
dc.date.issued.fl_str_mv |
2020-08-26 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/doctoralThesis |
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doctoralThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
MARTINEZ, Juliana de Fatima. Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae). 2020. Tese (Doutorado em Genética Evolutiva e Biologia Molecular) – Universidade Federal de São Carlos, São Carlos, 2020. Disponível em: https://repositorio.ufscar.br/handle/ufscar/13227. |
dc.identifier.uri.fl_str_mv |
https://repositorio.ufscar.br/handle/ufscar/13227 |
identifier_str_mv |
MARTINEZ, Juliana de Fatima. Estudos cromossômicos clássicos e moleculares no complexo de espécies Astyanax scabripinnis (Characiformes, Characidae). 2020. Tese (Doutorado em Genética Evolutiva e Biologia Molecular) – Universidade Federal de São Carlos, São Carlos, 2020. Disponível em: https://repositorio.ufscar.br/handle/ufscar/13227. |
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https://repositorio.ufscar.br/handle/ufscar/13227 |
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por |
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por |
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Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ info:eu-repo/semantics/openAccess |
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Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ |
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openAccess |
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Universidade Federal de São Carlos Câmpus São Carlos |
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Programa de Pós-Graduação em Genética Evolutiva e Biologia Molecular - PPGGEv |
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UFSCar |
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Universidade Federal de São Carlos Câmpus São Carlos |
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