Analysis of the spatial-temporal dynamics of incidence, mortality and test rates (rapid and RT-PCR) of COVID-19 in the state of Minas Gerais, Brazil

Detalhes bibliográficos
Autor(a) principal: Silva-Júnior, Milton José da
Data de Publicação: 2020
Outros Autores: Mendonça, Kaio Saramago, Lima, Caio Augusto de, Pires, Priscilla Larissa Silva, Calegari, Tatiany, Oliveira, Stefan Vilges de
Tipo de documento: preprint
Idioma: eng
Título da fonte: SciELO Preprints
Texto Completo: https://preprints.scielo.org/index.php/scielo/preprint/view/1077
Resumo: Introduction: A novel type of coronavirus, SARS-CoV-2, is responsible for an unprecedented pandemic with profound socioeconomic consequences. Owing to its recent discovery, the virus that emerged in the Chinese city of Wuhan in December 2019 still represents a great unknown to researchers. This study aims to establish the spatio-temporal associations of the incidence, mortality, and the rate of both rapid and RT-PCR tests in Minas Gerais. Methods: This is a quantitative analysis of secondary data based on a cross-sectional research design. Incidence, mortality, date of the first notification of COVID-19 and number of rapid and RT-PCR tests were obtained from the sources: Laboratory Environment Manager, e-SUS epidemiological surveillance platform and SES-MG. Pearson coefficient for correlation was calculated to establish the level of association between the relevant data. Descriptive statistical procedures were used to provide a comprehensive understanding of the distribution of incidence, mortality and test rates in the territory. Results: Positive correlations were found between the rate of rapid tests and incidence; rate of RT-PCR tests and incidence/mortality. At the municipal level, incidence, mortality, rate of rapid tests and RT-PCR revealed a negative correlation with days elapsed since the First Notified Case. The same effect occurs, at different intensities, at the level of health macro-regions. Discussion: The heterogeneity of the incidence and mortality of COVID-19 in the territory of Minas Gerais, as well as the rate of tests (rapid and RT-PCR) may be caused, in part, due to the different dates of introduction of the virus in the municipalities/macro-regions. It is speculated that this phenomenon occurs due to the dynamics of regional and inter-regional flows of people.
id SCI-1_933e9d1727ed0bca2215d766ec5b7178
oai_identifier_str oai:ops.preprints.scielo.org:preprint/1077
network_acronym_str SCI-1
network_name_str SciELO Preprints
repository_id_str
spelling Analysis of the spatial-temporal dynamics of incidence, mortality and test rates (rapid and RT-PCR) of COVID-19 in the state of Minas Gerais, BrazilCoronavirus InfectionsEpidemiologyCOVID-19Immunologic TestsPandemicsReverse Transcriptase Polymerase Chain ReactionIntroduction: A novel type of coronavirus, SARS-CoV-2, is responsible for an unprecedented pandemic with profound socioeconomic consequences. Owing to its recent discovery, the virus that emerged in the Chinese city of Wuhan in December 2019 still represents a great unknown to researchers. This study aims to establish the spatio-temporal associations of the incidence, mortality, and the rate of both rapid and RT-PCR tests in Minas Gerais. Methods: This is a quantitative analysis of secondary data based on a cross-sectional research design. Incidence, mortality, date of the first notification of COVID-19 and number of rapid and RT-PCR tests were obtained from the sources: Laboratory Environment Manager, e-SUS epidemiological surveillance platform and SES-MG. Pearson coefficient for correlation was calculated to establish the level of association between the relevant data. Descriptive statistical procedures were used to provide a comprehensive understanding of the distribution of incidence, mortality and test rates in the territory. Results: Positive correlations were found between the rate of rapid tests and incidence; rate of RT-PCR tests and incidence/mortality. At the municipal level, incidence, mortality, rate of rapid tests and RT-PCR revealed a negative correlation with days elapsed since the First Notified Case. The same effect occurs, at different intensities, at the level of health macro-regions. Discussion: The heterogeneity of the incidence and mortality of COVID-19 in the territory of Minas Gerais, as well as the rate of tests (rapid and RT-PCR) may be caused, in part, due to the different dates of introduction of the virus in the municipalities/macro-regions. It is speculated that this phenomenon occurs due to the dynamics of regional and inter-regional flows of people.SciELO PreprintsSciELO PreprintsSciELO Preprints2020-08-10info:eu-repo/semantics/preprintinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://preprints.scielo.org/index.php/scielo/preprint/view/107710.1590/SciELOPreprints.1077enghttps://preprints.scielo.org/index.php/scielo/article/view/1077/1565Copyright (c) 2020 Milton José da Silva-Júnior, Kaio Saramago Mendonça, Caio Augusto de Lima, Priscilla Larissa Silva Pires, Tatiany Calegari, Stefan Vilges de Oliveirahttps://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessSilva-Júnior, Milton José da Mendonça, Kaio Saramago Lima, Caio Augusto dePires, Priscilla Larissa Silva Calegari, Tatiany Oliveira, Stefan Vilges dereponame:SciELO Preprintsinstname:SciELOinstacron:SCI2020-08-08T00:37:54Zoai:ops.preprints.scielo.org:preprint/1077Servidor de preprintshttps://preprints.scielo.org/index.php/scieloONGhttps://preprints.scielo.org/index.php/scielo/oaiscielo.submission@scielo.orgopendoar:2020-08-08T00:37:54SciELO Preprints - SciELOfalse
dc.title.none.fl_str_mv Analysis of the spatial-temporal dynamics of incidence, mortality and test rates (rapid and RT-PCR) of COVID-19 in the state of Minas Gerais, Brazil
title Analysis of the spatial-temporal dynamics of incidence, mortality and test rates (rapid and RT-PCR) of COVID-19 in the state of Minas Gerais, Brazil
spellingShingle Analysis of the spatial-temporal dynamics of incidence, mortality and test rates (rapid and RT-PCR) of COVID-19 in the state of Minas Gerais, Brazil
Silva-Júnior, Milton José da
Coronavirus Infections
Epidemiology
COVID-19
Immunologic Tests
Pandemics
Reverse Transcriptase Polymerase Chain Reaction
title_short Analysis of the spatial-temporal dynamics of incidence, mortality and test rates (rapid and RT-PCR) of COVID-19 in the state of Minas Gerais, Brazil
title_full Analysis of the spatial-temporal dynamics of incidence, mortality and test rates (rapid and RT-PCR) of COVID-19 in the state of Minas Gerais, Brazil
title_fullStr Analysis of the spatial-temporal dynamics of incidence, mortality and test rates (rapid and RT-PCR) of COVID-19 in the state of Minas Gerais, Brazil
title_full_unstemmed Analysis of the spatial-temporal dynamics of incidence, mortality and test rates (rapid and RT-PCR) of COVID-19 in the state of Minas Gerais, Brazil
title_sort Analysis of the spatial-temporal dynamics of incidence, mortality and test rates (rapid and RT-PCR) of COVID-19 in the state of Minas Gerais, Brazil
author Silva-Júnior, Milton José da
author_facet Silva-Júnior, Milton José da
Mendonça, Kaio Saramago
Lima, Caio Augusto de
Pires, Priscilla Larissa Silva
Calegari, Tatiany
Oliveira, Stefan Vilges de
author_role author
author2 Mendonça, Kaio Saramago
Lima, Caio Augusto de
Pires, Priscilla Larissa Silva
Calegari, Tatiany
Oliveira, Stefan Vilges de
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Silva-Júnior, Milton José da
Mendonça, Kaio Saramago
Lima, Caio Augusto de
Pires, Priscilla Larissa Silva
Calegari, Tatiany
Oliveira, Stefan Vilges de
dc.subject.por.fl_str_mv Coronavirus Infections
Epidemiology
COVID-19
Immunologic Tests
Pandemics
Reverse Transcriptase Polymerase Chain Reaction
topic Coronavirus Infections
Epidemiology
COVID-19
Immunologic Tests
Pandemics
Reverse Transcriptase Polymerase Chain Reaction
description Introduction: A novel type of coronavirus, SARS-CoV-2, is responsible for an unprecedented pandemic with profound socioeconomic consequences. Owing to its recent discovery, the virus that emerged in the Chinese city of Wuhan in December 2019 still represents a great unknown to researchers. This study aims to establish the spatio-temporal associations of the incidence, mortality, and the rate of both rapid and RT-PCR tests in Minas Gerais. Methods: This is a quantitative analysis of secondary data based on a cross-sectional research design. Incidence, mortality, date of the first notification of COVID-19 and number of rapid and RT-PCR tests were obtained from the sources: Laboratory Environment Manager, e-SUS epidemiological surveillance platform and SES-MG. Pearson coefficient for correlation was calculated to establish the level of association between the relevant data. Descriptive statistical procedures were used to provide a comprehensive understanding of the distribution of incidence, mortality and test rates in the territory. Results: Positive correlations were found between the rate of rapid tests and incidence; rate of RT-PCR tests and incidence/mortality. At the municipal level, incidence, mortality, rate of rapid tests and RT-PCR revealed a negative correlation with days elapsed since the First Notified Case. The same effect occurs, at different intensities, at the level of health macro-regions. Discussion: The heterogeneity of the incidence and mortality of COVID-19 in the territory of Minas Gerais, as well as the rate of tests (rapid and RT-PCR) may be caused, in part, due to the different dates of introduction of the virus in the municipalities/macro-regions. It is speculated that this phenomenon occurs due to the dynamics of regional and inter-regional flows of people.
publishDate 2020
dc.date.none.fl_str_mv 2020-08-10
dc.type.driver.fl_str_mv info:eu-repo/semantics/preprint
info:eu-repo/semantics/publishedVersion
format preprint
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://preprints.scielo.org/index.php/scielo/preprint/view/1077
10.1590/SciELOPreprints.1077
url https://preprints.scielo.org/index.php/scielo/preprint/view/1077
identifier_str_mv 10.1590/SciELOPreprints.1077
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://preprints.scielo.org/index.php/scielo/article/view/1077/1565
dc.rights.driver.fl_str_mv https://creativecommons.org/licenses/by/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv SciELO Preprints
SciELO Preprints
SciELO Preprints
publisher.none.fl_str_mv SciELO Preprints
SciELO Preprints
SciELO Preprints
dc.source.none.fl_str_mv reponame:SciELO Preprints
instname:SciELO
instacron:SCI
instname_str SciELO
instacron_str SCI
institution SCI
reponame_str SciELO Preprints
collection SciELO Preprints
repository.name.fl_str_mv SciELO Preprints - SciELO
repository.mail.fl_str_mv scielo.submission@scielo.org
_version_ 1797047819890065408