Identification and characterization of Fusarium mangiferae as pathogen of mango malformation in India
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Brazilian Archives of Biology and Technology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132016000100204 |
Resumo: | ABSTRACT Fusarium mangiferae (=F. subglutinans) isolates collect from malformed samples from major mango-growing area of North India. Molecular identification and characterization of eleven most virulent isolates of F. mangiferae, based on pathogenicity tests used for the present study. Species-specific, genus specific ITS-PCR and PCR-RFLP performed for the accurate and easy detection of F. mangiferae. The rDNA-ITS 28S region sequences used for phylogenetic analysis of Fusarium isolates from India and other countries for homology search between them. The phylogenetic tree divided the isolates into three clades (i.e., American, Asian and African) and showed the high level of sequence based similarity (69-99%) among all Fusarium sequences from Asia. Thus, claimed Fusarium mangiferae as dominant pathogen of mango malformation. Furthermore, we conclude that exploiting the nested PCR coupled with PCR-RFLP will help in rapid and accurate detection of F. mangiferae pathogen of mango malformation. |
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Identification and characterization of Fusarium mangiferae as pathogen of mango malformation in IndiaFusarium mangiferaedetectionphylogenetic analysisvegetative malformationfloral malformation.ABSTRACT Fusarium mangiferae (=F. subglutinans) isolates collect from malformed samples from major mango-growing area of North India. Molecular identification and characterization of eleven most virulent isolates of F. mangiferae, based on pathogenicity tests used for the present study. Species-specific, genus specific ITS-PCR and PCR-RFLP performed for the accurate and easy detection of F. mangiferae. The rDNA-ITS 28S region sequences used for phylogenetic analysis of Fusarium isolates from India and other countries for homology search between them. The phylogenetic tree divided the isolates into three clades (i.e., American, Asian and African) and showed the high level of sequence based similarity (69-99%) among all Fusarium sequences from Asia. Thus, claimed Fusarium mangiferae as dominant pathogen of mango malformation. Furthermore, we conclude that exploiting the nested PCR coupled with PCR-RFLP will help in rapid and accurate detection of F. mangiferae pathogen of mango malformation.Instituto de Tecnologia do Paraná - Tecpar2016-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132016000100204Brazilian Archives of Biology and Technology v.59 2016reponame:Brazilian Archives of Biology and Technologyinstname:Instituto de Tecnologia do Paraná (Tecpar)instacron:TECPAR10.1590/1678-4324-2016160280info:eu-repo/semantics/openAccessKumar,PradeepKamle,MadhuMisra,Asok KumarO'Donovan,AnthoniaPagano,MarcelaModi,Dinesh Rajeng2017-01-20T00:00:00Zoai:scielo:S1516-89132016000100204Revistahttps://www.scielo.br/j/babt/https://old.scielo.br/oai/scielo-oai.phpbabt@tecpar.br||babt@tecpar.br1678-43241516-8913opendoar:2017-01-20T00:00Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar)false |
dc.title.none.fl_str_mv |
Identification and characterization of Fusarium mangiferae as pathogen of mango malformation in India |
title |
Identification and characterization of Fusarium mangiferae as pathogen of mango malformation in India |
spellingShingle |
Identification and characterization of Fusarium mangiferae as pathogen of mango malformation in India Kumar,Pradeep Fusarium mangiferae detection phylogenetic analysis vegetative malformation floral malformation. |
title_short |
Identification and characterization of Fusarium mangiferae as pathogen of mango malformation in India |
title_full |
Identification and characterization of Fusarium mangiferae as pathogen of mango malformation in India |
title_fullStr |
Identification and characterization of Fusarium mangiferae as pathogen of mango malformation in India |
title_full_unstemmed |
Identification and characterization of Fusarium mangiferae as pathogen of mango malformation in India |
title_sort |
Identification and characterization of Fusarium mangiferae as pathogen of mango malformation in India |
author |
Kumar,Pradeep |
author_facet |
Kumar,Pradeep Kamle,Madhu Misra,Asok Kumar O'Donovan,Anthonia Pagano,Marcela Modi,Dinesh Raj |
author_role |
author |
author2 |
Kamle,Madhu Misra,Asok Kumar O'Donovan,Anthonia Pagano,Marcela Modi,Dinesh Raj |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Kumar,Pradeep Kamle,Madhu Misra,Asok Kumar O'Donovan,Anthonia Pagano,Marcela Modi,Dinesh Raj |
dc.subject.por.fl_str_mv |
Fusarium mangiferae detection phylogenetic analysis vegetative malformation floral malformation. |
topic |
Fusarium mangiferae detection phylogenetic analysis vegetative malformation floral malformation. |
description |
ABSTRACT Fusarium mangiferae (=F. subglutinans) isolates collect from malformed samples from major mango-growing area of North India. Molecular identification and characterization of eleven most virulent isolates of F. mangiferae, based on pathogenicity tests used for the present study. Species-specific, genus specific ITS-PCR and PCR-RFLP performed for the accurate and easy detection of F. mangiferae. The rDNA-ITS 28S region sequences used for phylogenetic analysis of Fusarium isolates from India and other countries for homology search between them. The phylogenetic tree divided the isolates into three clades (i.e., American, Asian and African) and showed the high level of sequence based similarity (69-99%) among all Fusarium sequences from Asia. Thus, claimed Fusarium mangiferae as dominant pathogen of mango malformation. Furthermore, we conclude that exploiting the nested PCR coupled with PCR-RFLP will help in rapid and accurate detection of F. mangiferae pathogen of mango malformation. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132016000100204 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132016000100204 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1678-4324-2016160280 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Instituto de Tecnologia do Paraná - Tecpar |
publisher.none.fl_str_mv |
Instituto de Tecnologia do Paraná - Tecpar |
dc.source.none.fl_str_mv |
Brazilian Archives of Biology and Technology v.59 2016 reponame:Brazilian Archives of Biology and Technology instname:Instituto de Tecnologia do Paraná (Tecpar) instacron:TECPAR |
instname_str |
Instituto de Tecnologia do Paraná (Tecpar) |
instacron_str |
TECPAR |
institution |
TECPAR |
reponame_str |
Brazilian Archives of Biology and Technology |
collection |
Brazilian Archives of Biology and Technology |
repository.name.fl_str_mv |
Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar) |
repository.mail.fl_str_mv |
babt@tecpar.br||babt@tecpar.br |
_version_ |
1750318277291147264 |