Genetic diversity among Brazilian soybean cultivars based on SSR loci and pedigree data

Detalhes bibliográficos
Autor(a) principal: Priolli,Regina Helena Geribello
Data de Publicação: 2010
Outros Autores: Pinheiro,José Baldin, Zucchi,Maria Imaculada, Bajay,Miklos Maximiliano, Vello,Natal Antonio
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Archives of Biology and Technology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132010000300004
Resumo: In this study, simple sequence repeats (SSR) loci and pedigree data were used to investigate the genetic relationship in a group of 168 Brazilian soybean cultivars. Eighteen SSR loci produced an average of 5.06 alleles and a mean gene diversity of 0.58 for the cultivars studied. Genetic distance (GD) was determined using the modified Roger's Wright distance, and a final dendrogram was in agreement with the cultivar pedigree. A distance matrix based on the coefficient of parentage scores was also generated for the cultivars, which ranged from 0 to 1, with a mean of 0.18, whereas SSR-based genetic similarity (1- GD) ranged from 0.01 to 0.90, with a mean of 0.25. Mantel's Z test showed that the similarity matrices generated from both the data sets were low, but significantly correlated (r = 0.31, p<0.001). The results showed that SSR data and pedigree analyses could help to quantify more accurately the degree of relationship among the soybean cultivars.
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spelling Genetic diversity among Brazilian soybean cultivars based on SSR loci and pedigree dataCoefficient of parentageGlycine max (L.) Merr.microsatellite markersIn this study, simple sequence repeats (SSR) loci and pedigree data were used to investigate the genetic relationship in a group of 168 Brazilian soybean cultivars. Eighteen SSR loci produced an average of 5.06 alleles and a mean gene diversity of 0.58 for the cultivars studied. Genetic distance (GD) was determined using the modified Roger's Wright distance, and a final dendrogram was in agreement with the cultivar pedigree. A distance matrix based on the coefficient of parentage scores was also generated for the cultivars, which ranged from 0 to 1, with a mean of 0.18, whereas SSR-based genetic similarity (1- GD) ranged from 0.01 to 0.90, with a mean of 0.25. Mantel's Z test showed that the similarity matrices generated from both the data sets were low, but significantly correlated (r = 0.31, p<0.001). The results showed that SSR data and pedigree analyses could help to quantify more accurately the degree of relationship among the soybean cultivars.Instituto de Tecnologia do Paraná - Tecpar2010-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132010000300004Brazilian Archives of Biology and Technology v.53 n.3 2010reponame:Brazilian Archives of Biology and Technologyinstname:Instituto de Tecnologia do Paraná (Tecpar)instacron:TECPAR10.1590/S1516-89132010000300004info:eu-repo/semantics/openAccessPriolli,Regina Helena GeribelloPinheiro,José BaldinZucchi,Maria ImaculadaBajay,Miklos MaximilianoVello,Natal Antonioeng2010-06-11T00:00:00Zoai:scielo:S1516-89132010000300004Revistahttps://www.scielo.br/j/babt/https://old.scielo.br/oai/scielo-oai.phpbabt@tecpar.br||babt@tecpar.br1678-43241516-8913opendoar:2010-06-11T00:00Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar)false
dc.title.none.fl_str_mv Genetic diversity among Brazilian soybean cultivars based on SSR loci and pedigree data
title Genetic diversity among Brazilian soybean cultivars based on SSR loci and pedigree data
spellingShingle Genetic diversity among Brazilian soybean cultivars based on SSR loci and pedigree data
Priolli,Regina Helena Geribello
Coefficient of parentage
Glycine max (L.) Merr.
microsatellite markers
title_short Genetic diversity among Brazilian soybean cultivars based on SSR loci and pedigree data
title_full Genetic diversity among Brazilian soybean cultivars based on SSR loci and pedigree data
title_fullStr Genetic diversity among Brazilian soybean cultivars based on SSR loci and pedigree data
title_full_unstemmed Genetic diversity among Brazilian soybean cultivars based on SSR loci and pedigree data
title_sort Genetic diversity among Brazilian soybean cultivars based on SSR loci and pedigree data
author Priolli,Regina Helena Geribello
author_facet Priolli,Regina Helena Geribello
Pinheiro,José Baldin
Zucchi,Maria Imaculada
Bajay,Miklos Maximiliano
Vello,Natal Antonio
author_role author
author2 Pinheiro,José Baldin
Zucchi,Maria Imaculada
Bajay,Miklos Maximiliano
Vello,Natal Antonio
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Priolli,Regina Helena Geribello
Pinheiro,José Baldin
Zucchi,Maria Imaculada
Bajay,Miklos Maximiliano
Vello,Natal Antonio
dc.subject.por.fl_str_mv Coefficient of parentage
Glycine max (L.) Merr.
microsatellite markers
topic Coefficient of parentage
Glycine max (L.) Merr.
microsatellite markers
description In this study, simple sequence repeats (SSR) loci and pedigree data were used to investigate the genetic relationship in a group of 168 Brazilian soybean cultivars. Eighteen SSR loci produced an average of 5.06 alleles and a mean gene diversity of 0.58 for the cultivars studied. Genetic distance (GD) was determined using the modified Roger's Wright distance, and a final dendrogram was in agreement with the cultivar pedigree. A distance matrix based on the coefficient of parentage scores was also generated for the cultivars, which ranged from 0 to 1, with a mean of 0.18, whereas SSR-based genetic similarity (1- GD) ranged from 0.01 to 0.90, with a mean of 0.25. Mantel's Z test showed that the similarity matrices generated from both the data sets were low, but significantly correlated (r = 0.31, p<0.001). The results showed that SSR data and pedigree analyses could help to quantify more accurately the degree of relationship among the soybean cultivars.
publishDate 2010
dc.date.none.fl_str_mv 2010-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132010000300004
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132010000300004
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1516-89132010000300004
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto de Tecnologia do Paraná - Tecpar
publisher.none.fl_str_mv Instituto de Tecnologia do Paraná - Tecpar
dc.source.none.fl_str_mv Brazilian Archives of Biology and Technology v.53 n.3 2010
reponame:Brazilian Archives of Biology and Technology
instname:Instituto de Tecnologia do Paraná (Tecpar)
instacron:TECPAR
instname_str Instituto de Tecnologia do Paraná (Tecpar)
instacron_str TECPAR
institution TECPAR
reponame_str Brazilian Archives of Biology and Technology
collection Brazilian Archives of Biology and Technology
repository.name.fl_str_mv Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar)
repository.mail.fl_str_mv babt@tecpar.br||babt@tecpar.br
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