New Insights on Environmental Occurrence of Pathogenic Fungi Based on Metagenomic Data from Brazilian Cerrado Biome
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Brazilian Archives of Biology and Technology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132022000100701 |
Resumo: | Abstract: Cerrado is the second largest biome in Brazil and majorly contributes to the country's grain production. Previous studies on soil metagenomics from the Cerrado revealed an outstanding microbial diversity. In this study, the abundance of pathogenic fungi was analyzed using metagenomic sequences of the Cerrado soils under native vegetation, and under agriculture with no-tillage and conventional tillage. In total, 128,627 sequences of fungi were identified, with 43,439 representing pathogenic fungi and were distributed as follows: native 17,301 (40%), no-tillage 13,780 (32%), and conventional tillage 12,358 (28%). We identified 41 pathogenic fungal species associated with human and animal infections. The data analysis revealed that the native soils had a higher relative abundance of fungal sequences, similar to pathogenic species sequences, in relation to the total eukaryotic sequences, than the conventional tillage and no-tillage treatments, which observed a reduction in fungal abundance because of anthropogenic activities. |
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Brazilian Archives of Biology and Technology |
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New Insights on Environmental Occurrence of Pathogenic Fungi Based on Metagenomic Data from Brazilian Cerrado BiomePathogenic fungimetagenomicsCerrado biomeAbstract: Cerrado is the second largest biome in Brazil and majorly contributes to the country's grain production. Previous studies on soil metagenomics from the Cerrado revealed an outstanding microbial diversity. In this study, the abundance of pathogenic fungi was analyzed using metagenomic sequences of the Cerrado soils under native vegetation, and under agriculture with no-tillage and conventional tillage. In total, 128,627 sequences of fungi were identified, with 43,439 representing pathogenic fungi and were distributed as follows: native 17,301 (40%), no-tillage 13,780 (32%), and conventional tillage 12,358 (28%). We identified 41 pathogenic fungal species associated with human and animal infections. The data analysis revealed that the native soils had a higher relative abundance of fungal sequences, similar to pathogenic species sequences, in relation to the total eukaryotic sequences, than the conventional tillage and no-tillage treatments, which observed a reduction in fungal abundance because of anthropogenic activities.Instituto de Tecnologia do Paraná - Tecpar2022-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132022000100701Brazilian Archives of Biology and Technology v.65 2022reponame:Brazilian Archives of Biology and Technologyinstname:Instituto de Tecnologia do Paraná (Tecpar)instacron:TECPAR10.1590/1678-4324-2022210097info:eu-repo/semantics/openAccessCosta,Flávia de FátimaSouza,Renata CaroliniVoidaleski,Morgana FerreiraBombassaro,AmandaCandido,Giovanna ZuzarteSilva,Nickolas Menezes daRobl,DiogoMoreno,Leandro FerreiraWeiss,Vinicius AlmirRaittz,Roberto TadeuCastro,Mauro AntônioGomes,Renata RodriguesBittencourt,Juliana Vitoria MessiasHoog,Gerrit Sybren deHungria,MariangelaVicente,Vania Aparecidaeng2022-07-08T00:00:00Zoai:scielo:S1516-89132022000100701Revistahttps://www.scielo.br/j/babt/https://old.scielo.br/oai/scielo-oai.phpbabt@tecpar.br||babt@tecpar.br1678-43241516-8913opendoar:2022-07-08T00:00Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar)false |
dc.title.none.fl_str_mv |
New Insights on Environmental Occurrence of Pathogenic Fungi Based on Metagenomic Data from Brazilian Cerrado Biome |
title |
New Insights on Environmental Occurrence of Pathogenic Fungi Based on Metagenomic Data from Brazilian Cerrado Biome |
spellingShingle |
New Insights on Environmental Occurrence of Pathogenic Fungi Based on Metagenomic Data from Brazilian Cerrado Biome Costa,Flávia de Fátima Pathogenic fungi metagenomics Cerrado biome |
title_short |
New Insights on Environmental Occurrence of Pathogenic Fungi Based on Metagenomic Data from Brazilian Cerrado Biome |
title_full |
New Insights on Environmental Occurrence of Pathogenic Fungi Based on Metagenomic Data from Brazilian Cerrado Biome |
title_fullStr |
New Insights on Environmental Occurrence of Pathogenic Fungi Based on Metagenomic Data from Brazilian Cerrado Biome |
title_full_unstemmed |
New Insights on Environmental Occurrence of Pathogenic Fungi Based on Metagenomic Data from Brazilian Cerrado Biome |
title_sort |
New Insights on Environmental Occurrence of Pathogenic Fungi Based on Metagenomic Data from Brazilian Cerrado Biome |
author |
Costa,Flávia de Fátima |
author_facet |
Costa,Flávia de Fátima Souza,Renata Carolini Voidaleski,Morgana Ferreira Bombassaro,Amanda Candido,Giovanna Zuzarte Silva,Nickolas Menezes da Robl,Diogo Moreno,Leandro Ferreira Weiss,Vinicius Almir Raittz,Roberto Tadeu Castro,Mauro Antônio Gomes,Renata Rodrigues Bittencourt,Juliana Vitoria Messias Hoog,Gerrit Sybren de Hungria,Mariangela Vicente,Vania Aparecida |
author_role |
author |
author2 |
Souza,Renata Carolini Voidaleski,Morgana Ferreira Bombassaro,Amanda Candido,Giovanna Zuzarte Silva,Nickolas Menezes da Robl,Diogo Moreno,Leandro Ferreira Weiss,Vinicius Almir Raittz,Roberto Tadeu Castro,Mauro Antônio Gomes,Renata Rodrigues Bittencourt,Juliana Vitoria Messias Hoog,Gerrit Sybren de Hungria,Mariangela Vicente,Vania Aparecida |
author2_role |
author author author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Costa,Flávia de Fátima Souza,Renata Carolini Voidaleski,Morgana Ferreira Bombassaro,Amanda Candido,Giovanna Zuzarte Silva,Nickolas Menezes da Robl,Diogo Moreno,Leandro Ferreira Weiss,Vinicius Almir Raittz,Roberto Tadeu Castro,Mauro Antônio Gomes,Renata Rodrigues Bittencourt,Juliana Vitoria Messias Hoog,Gerrit Sybren de Hungria,Mariangela Vicente,Vania Aparecida |
dc.subject.por.fl_str_mv |
Pathogenic fungi metagenomics Cerrado biome |
topic |
Pathogenic fungi metagenomics Cerrado biome |
description |
Abstract: Cerrado is the second largest biome in Brazil and majorly contributes to the country's grain production. Previous studies on soil metagenomics from the Cerrado revealed an outstanding microbial diversity. In this study, the abundance of pathogenic fungi was analyzed using metagenomic sequences of the Cerrado soils under native vegetation, and under agriculture with no-tillage and conventional tillage. In total, 128,627 sequences of fungi were identified, with 43,439 representing pathogenic fungi and were distributed as follows: native 17,301 (40%), no-tillage 13,780 (32%), and conventional tillage 12,358 (28%). We identified 41 pathogenic fungal species associated with human and animal infections. The data analysis revealed that the native soils had a higher relative abundance of fungal sequences, similar to pathogenic species sequences, in relation to the total eukaryotic sequences, than the conventional tillage and no-tillage treatments, which observed a reduction in fungal abundance because of anthropogenic activities. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132022000100701 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132022000100701 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1678-4324-2022210097 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Instituto de Tecnologia do Paraná - Tecpar |
publisher.none.fl_str_mv |
Instituto de Tecnologia do Paraná - Tecpar |
dc.source.none.fl_str_mv |
Brazilian Archives of Biology and Technology v.65 2022 reponame:Brazilian Archives of Biology and Technology instname:Instituto de Tecnologia do Paraná (Tecpar) instacron:TECPAR |
instname_str |
Instituto de Tecnologia do Paraná (Tecpar) |
instacron_str |
TECPAR |
institution |
TECPAR |
reponame_str |
Brazilian Archives of Biology and Technology |
collection |
Brazilian Archives of Biology and Technology |
repository.name.fl_str_mv |
Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar) |
repository.mail.fl_str_mv |
babt@tecpar.br||babt@tecpar.br |
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1750318281705652224 |