Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Tipo de documento: | Tese |
Idioma: | por |
Título da fonte: | Biblioteca Digital de Teses e Dissertações da UCB |
Texto Completo: | https://bdtd.ucb.br:8443/jspui/handle/tede/2605 |
Resumo: | The coconut palm (Cocos nucifera L.) is a monocotyledonous diploid species (2n = 32; 1C = 2.74 Gb), belonging to the family Arecaceae (Palmae) widely cultivated in more than 90 countries mainly in tropical regions. The coconut tree presents two varieties, Cocos nucifera var. typica known as "Giant" and Cocos nucifera var. nana called "Dwarf". In view of the contrasting and complementary characteristics, hybrids between these two varieties present highly favorable intermediate characteristics, when gathering growth, fast germination, and flowering, good vigor, and productivity. The production of hybrid seeds between the Giant and Dwarf varieties is a relatively expensive process since it involves the controlled pollination using pollen mixture of giant parental on female flowers of the Dwarf variety. Being the autogamous Dwarf variety, it is common for a variable proportion of the offspring generated to be not from hybrids, but rather self-fertilizing products from the Dwarf parent. Moreover, since pollination is performed with pollen mixture, it is not possible to know the exact male parent, which prevents the exploration of non-additive effects derived from the specific ability of combining Giant and Dwarf individuals. From these technical challenges of the improvement and production of coconut palm in Brazil, this work involved a set of experiments aimed at the optimization of a system of microsatellite markers that allows the unequivocal identification of hybrids of the Giant x Dwarf cross, probable of specific hybrid plants and, applied in generations F2, to quantify the genome proportion of Giant vs. Dwarf, aiming to accelerate the breeding process that seeks to select early F2 plants with greater proportion of Dwarf genome while maintaining characteristics of the Giant's rusticity. The analysis of the F2 generation also aimed to evaluate the potential of constructing a genetic map for this population, with the future objective of mapping control locus of the characteristic of dwarfism. From a set of 22 microsatellites and 1 SCAR marker, 5 markers were selected that allowed to identify illegitimate hybrids in a sample of 192 supposed hybrids revealing a frequency of illegitimate of 12%. The analysis of genomic composition in the F2 plants was performed using the STRUCTURE program, revealing a strong structuring between the two varieties and showing evident segregation of the markers in F2, allowing quantification of the proportions of the Dwarf / Giant genome and to plan future mapping studies in F2 derived from pollination. Kinship analysis identified a most likely parent candidate for 165 F1 hybrid coconut plants among the 169 hybrid plants analyzed (98%). This system of analysis revealed that only 64 of the 81 Giant parents used in the pollen mix participated effectively in the generation of hybrids. Eight parents with high reproductive success were responsible for % of the hybrids generated. These results have an important impact on breeding practice because they allow to calibrate and monitor the performance of one or more compositions of future pollen mixes, in order to maximize the participation of Giant breeders in the generation of offspring, or alternatively to concentrate on a few more successful breeders reproductive and thus generate hybrid varieties originating from high specific capacity crosses between Dwarf and one or a few selected Giant breeders. |
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Biblioteca Digital de Teses e Dissertações da UCB |
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Grattapaglia, Dariohttp://lattes.cnpq.br/0576885615997048http://lattes.cnpq.br/6086648535216415Alves, Wellington Bruno dos Santos2019-06-17T19:58:41Z2019-02-28ALVES, Wellington Bruno dos Santos. Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141. 2019. 88 f. Tese (Programa Stricto Sensu em Ci??ncias Gen??micas e Biotecnologia) - Universidade Cat??lica de Bras??lia, Bras??lia, 2019.https://bdtd.ucb.br:8443/jspui/handle/tede/2605The coconut palm (Cocos nucifera L.) is a monocotyledonous diploid species (2n = 32; 1C = 2.74 Gb), belonging to the family Arecaceae (Palmae) widely cultivated in more than 90 countries mainly in tropical regions. The coconut tree presents two varieties, Cocos nucifera var. typica known as "Giant" and Cocos nucifera var. nana called "Dwarf". In view of the contrasting and complementary characteristics, hybrids between these two varieties present highly favorable intermediate characteristics, when gathering growth, fast germination, and flowering, good vigor, and productivity. The production of hybrid seeds between the Giant and Dwarf varieties is a relatively expensive process since it involves the controlled pollination using pollen mixture of giant parental on female flowers of the Dwarf variety. Being the autogamous Dwarf variety, it is common for a variable proportion of the offspring generated to be not from hybrids, but rather self-fertilizing products from the Dwarf parent. Moreover, since pollination is performed with pollen mixture, it is not possible to know the exact male parent, which prevents the exploration of non-additive effects derived from the specific ability of combining Giant and Dwarf individuals. From these technical challenges of the improvement and production of coconut palm in Brazil, this work involved a set of experiments aimed at the optimization of a system of microsatellite markers that allows the unequivocal identification of hybrids of the Giant x Dwarf cross, probable of specific hybrid plants and, applied in generations F2, to quantify the genome proportion of Giant vs. Dwarf, aiming to accelerate the breeding process that seeks to select early F2 plants with greater proportion of Dwarf genome while maintaining characteristics of the Giant's rusticity. The analysis of the F2 generation also aimed to evaluate the potential of constructing a genetic map for this population, with the future objective of mapping control locus of the characteristic of dwarfism. From a set of 22 microsatellites and 1 SCAR marker, 5 markers were selected that allowed to identify illegitimate hybrids in a sample of 192 supposed hybrids revealing a frequency of illegitimate of 12%. The analysis of genomic composition in the F2 plants was performed using the STRUCTURE program, revealing a strong structuring between the two varieties and showing evident segregation of the markers in F2, allowing quantification of the proportions of the Dwarf / Giant genome and to plan future mapping studies in F2 derived from pollination. Kinship analysis identified a most likely parent candidate for 165 F1 hybrid coconut plants among the 169 hybrid plants analyzed (98%). This system of analysis revealed that only 64 of the 81 Giant parents used in the pollen mix participated effectively in the generation of hybrids. Eight parents with high reproductive success were responsible for % of the hybrids generated. These results have an important impact on breeding practice because they allow to calibrate and monitor the performance of one or more compositions of future pollen mixes, in order to maximize the participation of Giant breeders in the generation of offspring, or alternatively to concentrate on a few more successful breeders reproductive and thus generate hybrid varieties originating from high specific capacity crosses between Dwarf and one or a few selected Giant breeders.O coqueiro (Cocos nucifera L.) ?? uma esp??cie monocotiled??nea diploide (2n = 32; 1C = 2.74 Gb), pertencente ?? fam??lia Arecaceae (Palmae) amplamente cultivada em mais de 90 pa??ses principalmente em regi??es de clima tropical. O coqueiro apresenta duas variedades, Cocos nucifera var. typica conhecida como ???Gigante??? e Cocos nucifera var. nana denominada ???An??o???. Em vista das caracter??sticas contrastantes e complementares, h??bridos entre estas duas variedades apresentam caracter??sticas intermedi??rias altamente favor??veis, ao reunir crescimento, germina????o e florescimento r??pidos, bom vigor e produtividade. A produ????o de sementes h??bridas entre as variedades Gigante e An??o, ?? um processo relativamente caro por envolver a poliniza????o controlada utilizando mistura de p??len de parentais gigantes sobre flores femininas de variedade An??o. Sendo a variedade An??o aut??gama, ?? comum que uma propor????o vari??vel dos descendentes gerados n??o seja de h??bridos, mas sim produtos de autofecunda????o do parental An??o. Al??m disso, uma vez que a poliniza????o ?? realizada com mistura de p??len, n??o ?? poss??vel conhecer o parental masculino exato, o que impede a explora????o de efeitos n??o aditivos derivados de capacidade espec??fica de combina????o entre indiv??duos de Gigante e An??o. A partir destes desafios t??cnicos do melhoramento e produ????o de coqueiro no Brasil, este trabalho envolveu um conjunto de experimentos visando a otimiza????o de um sistema de marcadores microssat??lites que permita a identifica????o inequ??voca de h??bridos do cruzamento Gigante x An??o, a determina????o do genitor masculino Gigante mais prov??vel de plantas h??bridas espec??ficas e, aplicado em gera????es F2, quantificar a propor????o gen??mica de Gigante vs. An??o, visando acelerar o processo de melhoramento que busca selecionar precocemente plantas F2 com maior propor????o de genoma An??o por??m, mantendo caracter??sticas de rusticidade do Gigante. A an??lise da gera????o F2 objetivou ainda avaliar o potencial de se construir um mapa gen??tico para esta popula????o, com o objetivo futuro de mapear locos controladores da caracter??stica de nanismo. A partir de um conjunto de 22 microssat??lites e 1 marcador SCAR, foram selecionados 5 marcadores que permitiram identificar h??bridos ileg??timos em uma amostra de 192 supostos h??bridos revelando uma frequ??ncia de ileg??timos de 12%. A an??lise de composi????o gen??mica nas plantas F2 foi realizada utilizando o programa STRUCTURE, revelando forte estrutura????o entre as duas variedades e apresentando evidente segrega????o dos marcadores na F2, permitindo quantificar as propor????es de genoma An??o/Gigante e planejar estudos futuros de mapeamento na F2 derivada de poliniza????o livre. A an??lise de parentesco identificou um candidato pai mais prov??vel para 165 plantas h??bridas F1 de coqueiro entre as 169 plantas h??bridas analisadas (98%). Este sistema de an??lise revelou ainda que 64 dos 81 genitores Gigante utilizados no mix de p??len participaram efetivamente da gera????o dos h??bridos. Oito genitores com elevado sucesso reprodutivo foram respons??veis por 42% dos h??bridos gerados. Estes resultados t??m impacto importante na pr??tica do melhoramento por permitirem calibrar e acompanhar o desempenho de uma ou mais composi????es de futuros mixes de p??len, visando maximizar a participa????o de genitores Gigantes na gera????o de descendentes, ou alternativamente concentrar em alguns poucos genitores que apresentaram maior sucesso reprodutivo e assim gerar variedades h??bridas oriundas de cruzamentos de elevada capacidade espec??fica de combina????o entre An??o e um ou poucos genitores Gigante selecionados.Submitted by Sara Ribeiro (sara.ribeiro@ucb.br) on 2019-06-17T19:58:28Z No. of bitstreams: 1 WellingtonBrunodosSantosAlvesDissertacao2019.pdf: 2253147 bytes, checksum: 1a9c3f177a376ef9c48283829c6a5d49 (MD5)Approved for entry into archive by Sara Ribeiro (sara.ribeiro@ucb.br) on 2019-06-17T19:58:41Z (GMT) No. of bitstreams: 1 WellingtonBrunodosSantosAlvesDissertacao2019.pdf: 2253147 bytes, checksum: 1a9c3f177a376ef9c48283829c6a5d49 (MD5)Made available in DSpace on 2019-06-17T19:58:41Z (GMT). No. of bitstreams: 1 WellingtonBrunodosSantosAlvesDissertacao2019.pdf: 2253147 bytes, checksum: 1a9c3f177a376ef9c48283829c6a5d49 (MD5) Previous issue date: 2019-02-28application/pdfhttps://bdtd.ucb.br:8443/jspui/retrieve/6512/WellingtonBrunodosSantosAlvesDissertacao2019.pdf.jpgporUniversidade Cat??lica de Bras??liaPrograma Stricto Sensu em Ci??ncias Gen??micas e BiotecnologiaUCBBrasilEscola de Sa??de e MedicinaMicrossat??litesCocos nuciferaLegitimidade de h??bridosMelhoramento do coqueiroCoconut improvementHybrids legitimacyMicrosatellitesCNPQ::CIENCIAS BIOLOGICASDetermina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UCBinstname:Universidade Católica de Brasília (UCB)instacron:UCBLICENSElicense.txtlicense.txttext/plain; charset=utf-81831https://200.214.135.178:8443/jspui/bitstream/tede/2605/1/license.txtd7d5e5ec75089f122abe937645a56120MD51ORIGINALWellingtonBrunodosSantosAlvesDissertacao2019.pdfWellingtonBrunodosSantosAlvesDissertacao2019.pdfapplication/pdf2253147https://200.214.135.178:8443/jspui/bitstream/tede/2605/2/WellingtonBrunodosSantosAlvesDissertacao2019.pdf1a9c3f177a376ef9c48283829c6a5d49MD52TEXTWellingtonBrunodosSantosAlvesDissertacao2019.pdf.txtWellingtonBrunodosSantosAlvesDissertacao2019.pdf.txttext/plain180383https://200.214.135.178:8443/jspui/bitstream/tede/2605/3/WellingtonBrunodosSantosAlvesDissertacao2019.pdf.txte830712cbfb74f2bc3f5c6195bceb161MD53THUMBNAILWellingtonBrunodosSantosAlvesDissertacao2019.pdf.jpgWellingtonBrunodosSantosAlvesDissertacao2019.pdf.jpgimage/jpeg6194https://200.214.135.178:8443/jspui/bitstream/tede/2605/4/WellingtonBrunodosSantosAlvesDissertacao2019.pdf.jpg9454213372e65d37d49407ecfc420db0MD54tede/26052019-06-18 01:06:05.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Biblioteca Digital de Teses e Dissertaçõeshttps://bdtd.ucb.br:8443/jspui/ |
dc.title.por.fl_str_mv |
Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141 |
title |
Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141 |
spellingShingle |
Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141 Alves, Wellington Bruno dos Santos Microssat??lites Cocos nucifera Legitimidade de h??bridos Melhoramento do coqueiro Coconut improvement Hybrids legitimacy Microsatellites CNPQ::CIENCIAS BIOLOGICAS |
title_short |
Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141 |
title_full |
Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141 |
title_fullStr |
Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141 |
title_full_unstemmed |
Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141 |
title_sort |
Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141 |
author |
Alves, Wellington Bruno dos Santos |
author_facet |
Alves, Wellington Bruno dos Santos |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Grattapaglia, Dario |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/0576885615997048 |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/6086648535216415 |
dc.contributor.author.fl_str_mv |
Alves, Wellington Bruno dos Santos |
contributor_str_mv |
Grattapaglia, Dario |
dc.subject.por.fl_str_mv |
Microssat??lites Cocos nucifera Legitimidade de h??bridos Melhoramento do coqueiro |
topic |
Microssat??lites Cocos nucifera Legitimidade de h??bridos Melhoramento do coqueiro Coconut improvement Hybrids legitimacy Microsatellites CNPQ::CIENCIAS BIOLOGICAS |
dc.subject.eng.fl_str_mv |
Coconut improvement Hybrids legitimacy Microsatellites |
dc.subject.cnpq.fl_str_mv |
CNPQ::CIENCIAS BIOLOGICAS |
dc.description.abstract.eng.fl_txt_mv |
The coconut palm (Cocos nucifera L.) is a monocotyledonous diploid species (2n = 32; 1C = 2.74 Gb), belonging to the family Arecaceae (Palmae) widely cultivated in more than 90 countries mainly in tropical regions. The coconut tree presents two varieties, Cocos nucifera var. typica known as "Giant" and Cocos nucifera var. nana called "Dwarf". In view of the contrasting and complementary characteristics, hybrids between these two varieties present highly favorable intermediate characteristics, when gathering growth, fast germination, and flowering, good vigor, and productivity. The production of hybrid seeds between the Giant and Dwarf varieties is a relatively expensive process since it involves the controlled pollination using pollen mixture of giant parental on female flowers of the Dwarf variety. Being the autogamous Dwarf variety, it is common for a variable proportion of the offspring generated to be not from hybrids, but rather self-fertilizing products from the Dwarf parent. Moreover, since pollination is performed with pollen mixture, it is not possible to know the exact male parent, which prevents the exploration of non-additive effects derived from the specific ability of combining Giant and Dwarf individuals. From these technical challenges of the improvement and production of coconut palm in Brazil, this work involved a set of experiments aimed at the optimization of a system of microsatellite markers that allows the unequivocal identification of hybrids of the Giant x Dwarf cross, probable of specific hybrid plants and, applied in generations F2, to quantify the genome proportion of Giant vs. Dwarf, aiming to accelerate the breeding process that seeks to select early F2 plants with greater proportion of Dwarf genome while maintaining characteristics of the Giant's rusticity. The analysis of the F2 generation also aimed to evaluate the potential of constructing a genetic map for this population, with the future objective of mapping control locus of the characteristic of dwarfism. From a set of 22 microsatellites and 1 SCAR marker, 5 markers were selected that allowed to identify illegitimate hybrids in a sample of 192 supposed hybrids revealing a frequency of illegitimate of 12%. The analysis of genomic composition in the F2 plants was performed using the STRUCTURE program, revealing a strong structuring between the two varieties and showing evident segregation of the markers in F2, allowing quantification of the proportions of the Dwarf / Giant genome and to plan future mapping studies in F2 derived from pollination. Kinship analysis identified a most likely parent candidate for 165 F1 hybrid coconut plants among the 169 hybrid plants analyzed (98%). This system of analysis revealed that only 64 of the 81 Giant parents used in the pollen mix participated effectively in the generation of hybrids. Eight parents with high reproductive success were responsible for % of the hybrids generated. These results have an important impact on breeding practice because they allow to calibrate and monitor the performance of one or more compositions of future pollen mixes, in order to maximize the participation of Giant breeders in the generation of offspring, or alternatively to concentrate on a few more successful breeders reproductive and thus generate hybrid varieties originating from high specific capacity crosses between Dwarf and one or a few selected Giant breeders. |
dc.description.abstract.por.fl_txt_mv |
O coqueiro (Cocos nucifera L.) ?? uma esp??cie monocotiled??nea diploide (2n = 32; 1C = 2.74 Gb), pertencente ?? fam??lia Arecaceae (Palmae) amplamente cultivada em mais de 90 pa??ses principalmente em regi??es de clima tropical. O coqueiro apresenta duas variedades, Cocos nucifera var. typica conhecida como ???Gigante??? e Cocos nucifera var. nana denominada ???An??o???. Em vista das caracter??sticas contrastantes e complementares, h??bridos entre estas duas variedades apresentam caracter??sticas intermedi??rias altamente favor??veis, ao reunir crescimento, germina????o e florescimento r??pidos, bom vigor e produtividade. A produ????o de sementes h??bridas entre as variedades Gigante e An??o, ?? um processo relativamente caro por envolver a poliniza????o controlada utilizando mistura de p??len de parentais gigantes sobre flores femininas de variedade An??o. Sendo a variedade An??o aut??gama, ?? comum que uma propor????o vari??vel dos descendentes gerados n??o seja de h??bridos, mas sim produtos de autofecunda????o do parental An??o. Al??m disso, uma vez que a poliniza????o ?? realizada com mistura de p??len, n??o ?? poss??vel conhecer o parental masculino exato, o que impede a explora????o de efeitos n??o aditivos derivados de capacidade espec??fica de combina????o entre indiv??duos de Gigante e An??o. A partir destes desafios t??cnicos do melhoramento e produ????o de coqueiro no Brasil, este trabalho envolveu um conjunto de experimentos visando a otimiza????o de um sistema de marcadores microssat??lites que permita a identifica????o inequ??voca de h??bridos do cruzamento Gigante x An??o, a determina????o do genitor masculino Gigante mais prov??vel de plantas h??bridas espec??ficas e, aplicado em gera????es F2, quantificar a propor????o gen??mica de Gigante vs. An??o, visando acelerar o processo de melhoramento que busca selecionar precocemente plantas F2 com maior propor????o de genoma An??o por??m, mantendo caracter??sticas de rusticidade do Gigante. A an??lise da gera????o F2 objetivou ainda avaliar o potencial de se construir um mapa gen??tico para esta popula????o, com o objetivo futuro de mapear locos controladores da caracter??stica de nanismo. A partir de um conjunto de 22 microssat??lites e 1 marcador SCAR, foram selecionados 5 marcadores que permitiram identificar h??bridos ileg??timos em uma amostra de 192 supostos h??bridos revelando uma frequ??ncia de ileg??timos de 12%. A an??lise de composi????o gen??mica nas plantas F2 foi realizada utilizando o programa STRUCTURE, revelando forte estrutura????o entre as duas variedades e apresentando evidente segrega????o dos marcadores na F2, permitindo quantificar as propor????es de genoma An??o/Gigante e planejar estudos futuros de mapeamento na F2 derivada de poliniza????o livre. A an??lise de parentesco identificou um candidato pai mais prov??vel para 165 plantas h??bridas F1 de coqueiro entre as 169 plantas h??bridas analisadas (98%). Este sistema de an??lise revelou ainda que 64 dos 81 genitores Gigante utilizados no mix de p??len participaram efetivamente da gera????o dos h??bridos. Oito genitores com elevado sucesso reprodutivo foram respons??veis por 42% dos h??bridos gerados. Estes resultados t??m impacto importante na pr??tica do melhoramento por permitirem calibrar e acompanhar o desempenho de uma ou mais composi????es de futuros mixes de p??len, visando maximizar a participa????o de genitores Gigantes na gera????o de descendentes, ou alternativamente concentrar em alguns poucos genitores que apresentaram maior sucesso reprodutivo e assim gerar variedades h??bridas oriundas de cruzamentos de elevada capacidade espec??fica de combina????o entre An??o e um ou poucos genitores Gigante selecionados. |
description |
The coconut palm (Cocos nucifera L.) is a monocotyledonous diploid species (2n = 32; 1C = 2.74 Gb), belonging to the family Arecaceae (Palmae) widely cultivated in more than 90 countries mainly in tropical regions. The coconut tree presents two varieties, Cocos nucifera var. typica known as "Giant" and Cocos nucifera var. nana called "Dwarf". In view of the contrasting and complementary characteristics, hybrids between these two varieties present highly favorable intermediate characteristics, when gathering growth, fast germination, and flowering, good vigor, and productivity. The production of hybrid seeds between the Giant and Dwarf varieties is a relatively expensive process since it involves the controlled pollination using pollen mixture of giant parental on female flowers of the Dwarf variety. Being the autogamous Dwarf variety, it is common for a variable proportion of the offspring generated to be not from hybrids, but rather self-fertilizing products from the Dwarf parent. Moreover, since pollination is performed with pollen mixture, it is not possible to know the exact male parent, which prevents the exploration of non-additive effects derived from the specific ability of combining Giant and Dwarf individuals. From these technical challenges of the improvement and production of coconut palm in Brazil, this work involved a set of experiments aimed at the optimization of a system of microsatellite markers that allows the unequivocal identification of hybrids of the Giant x Dwarf cross, probable of specific hybrid plants and, applied in generations F2, to quantify the genome proportion of Giant vs. Dwarf, aiming to accelerate the breeding process that seeks to select early F2 plants with greater proportion of Dwarf genome while maintaining characteristics of the Giant's rusticity. The analysis of the F2 generation also aimed to evaluate the potential of constructing a genetic map for this population, with the future objective of mapping control locus of the characteristic of dwarfism. From a set of 22 microsatellites and 1 SCAR marker, 5 markers were selected that allowed to identify illegitimate hybrids in a sample of 192 supposed hybrids revealing a frequency of illegitimate of 12%. The analysis of genomic composition in the F2 plants was performed using the STRUCTURE program, revealing a strong structuring between the two varieties and showing evident segregation of the markers in F2, allowing quantification of the proportions of the Dwarf / Giant genome and to plan future mapping studies in F2 derived from pollination. Kinship analysis identified a most likely parent candidate for 165 F1 hybrid coconut plants among the 169 hybrid plants analyzed (98%). This system of analysis revealed that only 64 of the 81 Giant parents used in the pollen mix participated effectively in the generation of hybrids. Eight parents with high reproductive success were responsible for % of the hybrids generated. These results have an important impact on breeding practice because they allow to calibrate and monitor the performance of one or more compositions of future pollen mixes, in order to maximize the participation of Giant breeders in the generation of offspring, or alternatively to concentrate on a few more successful breeders reproductive and thus generate hybrid varieties originating from high specific capacity crosses between Dwarf and one or a few selected Giant breeders. |
publishDate |
2019 |
dc.date.accessioned.fl_str_mv |
2019-06-17T19:58:41Z |
dc.date.issued.fl_str_mv |
2019-02-28 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/doctoralThesis |
status_str |
publishedVersion |
format |
doctoralThesis |
dc.identifier.citation.fl_str_mv |
ALVES, Wellington Bruno dos Santos. Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141. 2019. 88 f. Tese (Programa Stricto Sensu em Ci??ncias Gen??micas e Biotecnologia) - Universidade Cat??lica de Bras??lia, Bras??lia, 2019. |
dc.identifier.uri.fl_str_mv |
https://bdtd.ucb.br:8443/jspui/handle/tede/2605 |
identifier_str_mv |
ALVES, Wellington Bruno dos Santos. Determina????o do parentesco, em h??bridos F1 e quantifica????o das propor????es gen??micas dos ide??tipos An??o Verde do Brasil de Jequi (AVeBrJ) e Gigante do Oeste Africano (GOA), em plantas F2, do h??brido de coqueiro (Cocos nucifera) PB-141. 2019. 88 f. Tese (Programa Stricto Sensu em Ci??ncias Gen??micas e Biotecnologia) - Universidade Cat??lica de Bras??lia, Bras??lia, 2019. |
url |
https://bdtd.ucb.br:8443/jspui/handle/tede/2605 |
dc.language.iso.fl_str_mv |
por |
language |
por |
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info:eu-repo/semantics/openAccess |
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openAccess |
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application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Cat??lica de Bras??lia |
dc.publisher.program.fl_str_mv |
Programa Stricto Sensu em Ci??ncias Gen??micas e Biotecnologia |
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UCB |
dc.publisher.country.fl_str_mv |
Brasil |
dc.publisher.department.fl_str_mv |
Escola de Sa??de e Medicina |
publisher.none.fl_str_mv |
Universidade Cat??lica de Bras??lia |
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