Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Tipo de documento: | Tese |
Idioma: | por |
Título da fonte: | Biblioteca Digital de Teses e Dissertações da UEFS |
Texto Completo: | http://tede2.uefs.br:8080/handle/tede/1411 |
Resumo: | Bahia stands out among the largest papaya producing states in Brazil. Among the factors limiting the culture, the Papaya sticky disease, or “meleira” stands out. Honeydew is caused by the Papaya meleira virus (PMeV). Later, in plants with symptoms, a second virus was identified: Papaya meleira virus 2 (PMeV2). Thus, the disease has been called the PMeV Complex. In this sense, the objectives of this study were to identify risk factors for papaya honey in conditions in the extreme south of the state of Bahia; determine the spatio-temporal pattern of the disease in the region's cultivation conditions; characterize the genome of a PMeV2 isolate; to estimate the genetic diversity and phylogenetic relationships between PMeV2 isolates from orchards in northeastern Brazil and to know the damage caused by papaya in conventional cultivation of papaya in the extreme south of Bahia. Risk analyzes have shown that there is more risk that a mixed orchard may have meleira. Aggregation of diseased plants was observed in less than half of the evaluated areas. The analysis of isopathic areas indicated a tendency for epidemics to start from the edges of the orchards. However, there was no evidence of a higher incidence of honeydew at the edges of the orchards as the epidemics progressed, which suggests the occurrence of secondary outbreaks. The sequence obtained in this work, called PMeV2-RN, has 4,435 nucleotides and has about 94% identity with the isolate PMeV2-ES from Espírito Santo. The sequence contains two ORFs predicted at different reading stages, the first encoding a 238 amino acid polypeptide that has 88% identity with the corresponding PMeV2-ES protein, and the second encoding a 473 amino acid protein, which has 100% identity with the PMeV2-ES RdRp protein. Phylogenetic analyzes showed greater proximity between the isolate PMeV2-ES and the isolates PpVQ and PMeV-Mx than with PMeV2-RN, which seems to belong to a distinct strain of this virus. The analysis of the nucleotide sequences of the isolates from different papaya producing regions in Brazil indicated a high degree of similarity between the isolates, which did not form geographically structured groups. Considering the survey of the average prices paid to the producer, the profitability indicators for papaya Havaí and Formosa are recommended up to 40% of losses for meleira. |
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Schnadelbach, Alessandra Selbach64826520000http://lattes.cnpq.br/3534813150154706Barbosa, Cristiane de Jesus45655642549http://lattes.cnpq.br/721091095556393902965382569http://lattes.cnpq.br/5941996655570407Cruz Neto, Alírio José da2023-01-26T12:46:03Z2020-06-10CRUZ NETO, Alírio José da. Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira vírus 2 (pmev2). 2020. 120 f. Tese (Doutorado em Recursos Genéticos Vegetais) - Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Feira de Santana, 2020.http://tede2.uefs.br:8080/handle/tede/1411Bahia stands out among the largest papaya producing states in Brazil. Among the factors limiting the culture, the Papaya sticky disease, or “meleira” stands out. Honeydew is caused by the Papaya meleira virus (PMeV). Later, in plants with symptoms, a second virus was identified: Papaya meleira virus 2 (PMeV2). Thus, the disease has been called the PMeV Complex. In this sense, the objectives of this study were to identify risk factors for papaya honey in conditions in the extreme south of the state of Bahia; determine the spatio-temporal pattern of the disease in the region's cultivation conditions; characterize the genome of a PMeV2 isolate; to estimate the genetic diversity and phylogenetic relationships between PMeV2 isolates from orchards in northeastern Brazil and to know the damage caused by papaya in conventional cultivation of papaya in the extreme south of Bahia. Risk analyzes have shown that there is more risk that a mixed orchard may have meleira. Aggregation of diseased plants was observed in less than half of the evaluated areas. The analysis of isopathic areas indicated a tendency for epidemics to start from the edges of the orchards. However, there was no evidence of a higher incidence of honeydew at the edges of the orchards as the epidemics progressed, which suggests the occurrence of secondary outbreaks. The sequence obtained in this work, called PMeV2-RN, has 4,435 nucleotides and has about 94% identity with the isolate PMeV2-ES from Espírito Santo. The sequence contains two ORFs predicted at different reading stages, the first encoding a 238 amino acid polypeptide that has 88% identity with the corresponding PMeV2-ES protein, and the second encoding a 473 amino acid protein, which has 100% identity with the PMeV2-ES RdRp protein. Phylogenetic analyzes showed greater proximity between the isolate PMeV2-ES and the isolates PpVQ and PMeV-Mx than with PMeV2-RN, which seems to belong to a distinct strain of this virus. The analysis of the nucleotide sequences of the isolates from different papaya producing regions in Brazil indicated a high degree of similarity between the isolates, which did not form geographically structured groups. Considering the survey of the average prices paid to the producer, the profitability indicators for papaya Havaí and Formosa are recommended up to 40% of losses for meleira.A Bahia destaca-se entre os maiores estados produtores de mamão do Brasil. Entre os fatores limitantes à cultura, destaca-se a meleira do mamoeiro. A meleira é causada pelo Papaya meleira virus (PMeV). Posteriormente, em plantas com sintomas foi identificado um segundo vírus: o Papaya meleira virus 2 (PMeV2). Assim, a doença tem sido designada de Complexo PMeV. Neste sentido, os objetivos deste trabalho foram identificar fatores de risco para meleira do mamoeiro nas condições do extremo sul do estado da Bahia; determinar o padrão espaço-temporal da doença nas condições de cultivo da região; caracterizar o genoma de um isolado do PMeV2; estimar a diversidade genética e as relações filogenéticas existentes entre os isolados do PMeV2 oriundos de pomares da região nordeste do Brasil e conhecer os danos causados pela meleira em cultivo convencional do mamoeiro no extremo sul da Bahia. As análises de risco mostraram que há mais riscos de um pomar consorciado apresentar meleira. Foi observada a agregação de plantas doentes em menos da metade das áreas avaliadas. A análise de áreas isópatas indicou uma tendência para início das epidemias a partir das bordas dos pomares. No entanto, não foram observadas evidências de maior incidência da meleira nas bordas dos pomares ao longo do progresso das epidemias, o que sugere a ocorrência de focos secundários. A sequência obtida neste trabalho, designada de PMeV2-RN, possui 4.435 nucleotídeos e possui cerca de 94% de identidade com o isolado PMeV2-ES do Espírito Santo. A sequência contém duas ORFs preditas em diferentes fases de leitura, a primeira codifica um polipeptídeo de 238 aminoácidos que possui 88% de identidade com a proteína correspondente do PMeV2-ES, e segunda codifica para uma proteína de 473 aminoácidos, que possui 100% de identidade com a proteína referente a RdRp do PMeV2-ES. As análises filogenéticas mostraram maior proximidade entre o isolado PMeV2-ES e os isolados PpVQ e PMeV-Mx do que com o PMeV2-RN, que parece pertencer a uma linhagem distinta deste vírus. A análise das sequências de nucleotídeos dos isolados de diferentes regiões produtoras de mamão do Brasil indicou alto grau de similaridade entre os isolados, que não formaram grupos geograficamente estruturados. Considerando-se o levantamento dos preços médios pagos ao produtor, os indicadores de rentabilidade para o mamão Havaí e Formosa são recomendáveis até 40% de perdas para meleira.Submitted by Renata Aline Souza Silva (rassilva@uefs.br) on 2023-01-26T12:46:03Z No. of bitstreams: 1 Tese _Alirio José da Cruz Neto_2020.pdf: 1272876 bytes, checksum: 6413b3815910685dab6b7437b1446868 (MD5)Made available in DSpace on 2023-01-26T12:46:03Z (GMT). No. of bitstreams: 1 Tese _Alirio José da Cruz Neto_2020.pdf: 1272876 bytes, checksum: 6413b3815910685dab6b7437b1446868 (MD5) Previous issue date: 2020-06-10Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESFundação de Amparo à Pesquisa do Estado da Bahia - FAPEBapplication/pdfporUniversidade Estadual de Feira de SantanaDoutorado Acadêmico em Recursos Genéticos VegetaisUEFSBrasilDEPARTAMENTO DE CIÊNCIAS BIOLÓGICASPMeVUmbravirusMamãoCarica papaya L.PMeVUmbravirusPapayaCarica papaya L.CIENCIAS AGRARIAS::AGRONOMIACIENCIAS AGRARIASEpidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis-32675240948481849496006006006006006005026123383450589282-309113871490760390778284247269066639193590462550136975366-8233071094704392586info:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UEFSinstname:Universidade Estadual de Feira de Santana (UEFS)instacron:UEFSORIGINALTese _Alirio José da Cruz Neto_2020.pdfTese _Alirio José da Cruz Neto_2020.pdfapplication/pdf1272876http://tede2.uefs.br:8080/bitstream/tede/1411/2/Tese+_Alirio+Jos%C3%A9+da+Cruz+Neto_2020.pdf6413b3815910685dab6b7437b1446868MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-82089http://tede2.uefs.br:8080/bitstream/tede/1411/1/license.txt7b5ba3d2445355f386edab96125d42b7MD51tede/14112023-01-26 09:46:03.645oai:tede2.uefs.br:8080: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Biblioteca Digital de Teses e Dissertaçõeshttp://tede2.uefs.br:8080/PUBhttp://tede2.uefs.br:8080/oai/requestbcuefs@uefs.br|| bcref@uefs.br||bcuefs@uefs.bropendoar:2023-01-26T12:46:03Biblioteca Digital de Teses e Dissertações da UEFS - Universidade Estadual de Feira de Santana (UEFS)false |
dc.title.por.fl_str_mv |
Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2) |
title |
Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2) |
spellingShingle |
Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2) Cruz Neto, Alírio José da PMeV Umbravirus Mamão Carica papaya L. PMeV Umbravirus Papaya Carica papaya L. CIENCIAS AGRARIAS::AGRONOMIA CIENCIAS AGRARIAS |
title_short |
Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2) |
title_full |
Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2) |
title_fullStr |
Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2) |
title_full_unstemmed |
Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2) |
title_sort |
Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2) |
author |
Cruz Neto, Alírio José da |
author_facet |
Cruz Neto, Alírio José da |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Schnadelbach, Alessandra Selbach |
dc.contributor.advisor1ID.fl_str_mv |
64826520000 |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/3534813150154706 |
dc.contributor.advisor-co1.fl_str_mv |
Barbosa, Cristiane de Jesus |
dc.contributor.advisor-co1ID.fl_str_mv |
45655642549 |
dc.contributor.advisor-co1Lattes.fl_str_mv |
http://lattes.cnpq.br/7210910955563939 |
dc.contributor.authorID.fl_str_mv |
02965382569 |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/5941996655570407 |
dc.contributor.author.fl_str_mv |
Cruz Neto, Alírio José da |
contributor_str_mv |
Schnadelbach, Alessandra Selbach Barbosa, Cristiane de Jesus |
dc.subject.por.fl_str_mv |
PMeV Umbravirus Mamão Carica papaya L. |
topic |
PMeV Umbravirus Mamão Carica papaya L. PMeV Umbravirus Papaya Carica papaya L. CIENCIAS AGRARIAS::AGRONOMIA CIENCIAS AGRARIAS |
dc.subject.eng.fl_str_mv |
PMeV Umbravirus Papaya Carica papaya L. |
dc.subject.cnpq.fl_str_mv |
CIENCIAS AGRARIAS::AGRONOMIA CIENCIAS AGRARIAS |
description |
Bahia stands out among the largest papaya producing states in Brazil. Among the factors limiting the culture, the Papaya sticky disease, or “meleira” stands out. Honeydew is caused by the Papaya meleira virus (PMeV). Later, in plants with symptoms, a second virus was identified: Papaya meleira virus 2 (PMeV2). Thus, the disease has been called the PMeV Complex. In this sense, the objectives of this study were to identify risk factors for papaya honey in conditions in the extreme south of the state of Bahia; determine the spatio-temporal pattern of the disease in the region's cultivation conditions; characterize the genome of a PMeV2 isolate; to estimate the genetic diversity and phylogenetic relationships between PMeV2 isolates from orchards in northeastern Brazil and to know the damage caused by papaya in conventional cultivation of papaya in the extreme south of Bahia. Risk analyzes have shown that there is more risk that a mixed orchard may have meleira. Aggregation of diseased plants was observed in less than half of the evaluated areas. The analysis of isopathic areas indicated a tendency for epidemics to start from the edges of the orchards. However, there was no evidence of a higher incidence of honeydew at the edges of the orchards as the epidemics progressed, which suggests the occurrence of secondary outbreaks. The sequence obtained in this work, called PMeV2-RN, has 4,435 nucleotides and has about 94% identity with the isolate PMeV2-ES from Espírito Santo. The sequence contains two ORFs predicted at different reading stages, the first encoding a 238 amino acid polypeptide that has 88% identity with the corresponding PMeV2-ES protein, and the second encoding a 473 amino acid protein, which has 100% identity with the PMeV2-ES RdRp protein. Phylogenetic analyzes showed greater proximity between the isolate PMeV2-ES and the isolates PpVQ and PMeV-Mx than with PMeV2-RN, which seems to belong to a distinct strain of this virus. The analysis of the nucleotide sequences of the isolates from different papaya producing regions in Brazil indicated a high degree of similarity between the isolates, which did not form geographically structured groups. Considering the survey of the average prices paid to the producer, the profitability indicators for papaya Havaí and Formosa are recommended up to 40% of losses for meleira. |
publishDate |
2020 |
dc.date.issued.fl_str_mv |
2020-06-10 |
dc.date.accessioned.fl_str_mv |
2023-01-26T12:46:03Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/doctoralThesis |
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doctoralThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
CRUZ NETO, Alírio José da. Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira vírus 2 (pmev2). 2020. 120 f. Tese (Doutorado em Recursos Genéticos Vegetais) - Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Feira de Santana, 2020. |
dc.identifier.uri.fl_str_mv |
http://tede2.uefs.br:8080/handle/tede/1411 |
identifier_str_mv |
CRUZ NETO, Alírio José da. Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira vírus 2 (pmev2). 2020. 120 f. Tese (Doutorado em Recursos Genéticos Vegetais) - Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Feira de Santana, 2020. |
url |
http://tede2.uefs.br:8080/handle/tede/1411 |
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por |
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info:eu-repo/semantics/openAccess |
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openAccess |
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Universidade Estadual de Feira de Santana |
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Doutorado Acadêmico em Recursos Genéticos Vegetais |
dc.publisher.initials.fl_str_mv |
UEFS |
dc.publisher.country.fl_str_mv |
Brasil |
dc.publisher.department.fl_str_mv |
DEPARTAMENTO DE CIÊNCIAS BIOLÓGICAS |
publisher.none.fl_str_mv |
Universidade Estadual de Feira de Santana |
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