Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)

Detalhes bibliográficos
Autor(a) principal: Cruz Neto, Alírio José da
Data de Publicação: 2020
Tipo de documento: Tese
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UEFS
Texto Completo: http://tede2.uefs.br:8080/handle/tede/1411
Resumo: Bahia stands out among the largest papaya producing states in Brazil. Among the factors limiting the culture, the Papaya sticky disease, or “meleira” stands out. Honeydew is caused by the Papaya meleira virus (PMeV). Later, in plants with symptoms, a second virus was identified: Papaya meleira virus 2 (PMeV2). Thus, the disease has been called the PMeV Complex. In this sense, the objectives of this study were to identify risk factors for papaya honey in conditions in the extreme south of the state of Bahia; determine the spatio-temporal pattern of the disease in the region's cultivation conditions; characterize the genome of a PMeV2 isolate; to estimate the genetic diversity and phylogenetic relationships between PMeV2 isolates from orchards in northeastern Brazil and to know the damage caused by papaya in conventional cultivation of papaya in the extreme south of Bahia. Risk analyzes have shown that there is more risk that a mixed orchard may have meleira. Aggregation of diseased plants was observed in less than half of the evaluated areas. The analysis of isopathic areas indicated a tendency for epidemics to start from the edges of the orchards. However, there was no evidence of a higher incidence of honeydew at the edges of the orchards as the epidemics progressed, which suggests the occurrence of secondary outbreaks. The sequence obtained in this work, called PMeV2-RN, has 4,435 nucleotides and has about 94% identity with the isolate PMeV2-ES from Espírito Santo. The sequence contains two ORFs predicted at different reading stages, the first encoding a 238 amino acid polypeptide that has 88% identity with the corresponding PMeV2-ES protein, and the second encoding a 473 amino acid protein, which has 100% identity with the PMeV2-ES RdRp protein. Phylogenetic analyzes showed greater proximity between the isolate PMeV2-ES and the isolates PpVQ and PMeV-Mx than with PMeV2-RN, which seems to belong to a distinct strain of this virus. The analysis of the nucleotide sequences of the isolates from different papaya producing regions in Brazil indicated a high degree of similarity between the isolates, which did not form geographically structured groups. Considering the survey of the average prices paid to the producer, the profitability indicators for papaya Havaí and Formosa are recommended up to 40% of losses for meleira.
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spelling Schnadelbach, Alessandra Selbach64826520000http://lattes.cnpq.br/3534813150154706Barbosa, Cristiane de Jesus45655642549http://lattes.cnpq.br/721091095556393902965382569http://lattes.cnpq.br/5941996655570407Cruz Neto, Alírio José da2023-01-26T12:46:03Z2020-06-10CRUZ NETO, Alírio José da. Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira vírus 2 (pmev2). 2020. 120 f. Tese (Doutorado em Recursos Genéticos Vegetais) - Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Feira de Santana, 2020.http://tede2.uefs.br:8080/handle/tede/1411Bahia stands out among the largest papaya producing states in Brazil. Among the factors limiting the culture, the Papaya sticky disease, or “meleira” stands out. Honeydew is caused by the Papaya meleira virus (PMeV). Later, in plants with symptoms, a second virus was identified: Papaya meleira virus 2 (PMeV2). Thus, the disease has been called the PMeV Complex. In this sense, the objectives of this study were to identify risk factors for papaya honey in conditions in the extreme south of the state of Bahia; determine the spatio-temporal pattern of the disease in the region's cultivation conditions; characterize the genome of a PMeV2 isolate; to estimate the genetic diversity and phylogenetic relationships between PMeV2 isolates from orchards in northeastern Brazil and to know the damage caused by papaya in conventional cultivation of papaya in the extreme south of Bahia. Risk analyzes have shown that there is more risk that a mixed orchard may have meleira. Aggregation of diseased plants was observed in less than half of the evaluated areas. The analysis of isopathic areas indicated a tendency for epidemics to start from the edges of the orchards. However, there was no evidence of a higher incidence of honeydew at the edges of the orchards as the epidemics progressed, which suggests the occurrence of secondary outbreaks. The sequence obtained in this work, called PMeV2-RN, has 4,435 nucleotides and has about 94% identity with the isolate PMeV2-ES from Espírito Santo. The sequence contains two ORFs predicted at different reading stages, the first encoding a 238 amino acid polypeptide that has 88% identity with the corresponding PMeV2-ES protein, and the second encoding a 473 amino acid protein, which has 100% identity with the PMeV2-ES RdRp protein. Phylogenetic analyzes showed greater proximity between the isolate PMeV2-ES and the isolates PpVQ and PMeV-Mx than with PMeV2-RN, which seems to belong to a distinct strain of this virus. The analysis of the nucleotide sequences of the isolates from different papaya producing regions in Brazil indicated a high degree of similarity between the isolates, which did not form geographically structured groups. Considering the survey of the average prices paid to the producer, the profitability indicators for papaya Havaí and Formosa are recommended up to 40% of losses for meleira.A Bahia destaca-se entre os maiores estados produtores de mamão do Brasil. Entre os fatores limitantes à cultura, destaca-se a meleira do mamoeiro. A meleira é causada pelo Papaya meleira virus (PMeV). Posteriormente, em plantas com sintomas foi identificado um segundo vírus: o Papaya meleira virus 2 (PMeV2). Assim, a doença tem sido designada de Complexo PMeV. Neste sentido, os objetivos deste trabalho foram identificar fatores de risco para meleira do mamoeiro nas condições do extremo sul do estado da Bahia; determinar o padrão espaço-temporal da doença nas condições de cultivo da região; caracterizar o genoma de um isolado do PMeV2; estimar a diversidade genética e as relações filogenéticas existentes entre os isolados do PMeV2 oriundos de pomares da região nordeste do Brasil e conhecer os danos causados pela meleira em cultivo convencional do mamoeiro no extremo sul da Bahia. As análises de risco mostraram que há mais riscos de um pomar consorciado apresentar meleira. Foi observada a agregação de plantas doentes em menos da metade das áreas avaliadas. A análise de áreas isópatas indicou uma tendência para início das epidemias a partir das bordas dos pomares. No entanto, não foram observadas evidências de maior incidência da meleira nas bordas dos pomares ao longo do progresso das epidemias, o que sugere a ocorrência de focos secundários. A sequência obtida neste trabalho, designada de PMeV2-RN, possui 4.435 nucleotídeos e possui cerca de 94% de identidade com o isolado PMeV2-ES do Espírito Santo. A sequência contém duas ORFs preditas em diferentes fases de leitura, a primeira codifica um polipeptídeo de 238 aminoácidos que possui 88% de identidade com a proteína correspondente do PMeV2-ES, e segunda codifica para uma proteína de 473 aminoácidos, que possui 100% de identidade com a proteína referente a RdRp do PMeV2-ES. As análises filogenéticas mostraram maior proximidade entre o isolado PMeV2-ES e os isolados PpVQ e PMeV-Mx do que com o PMeV2-RN, que parece pertencer a uma linhagem distinta deste vírus. A análise das sequências de nucleotídeos dos isolados de diferentes regiões produtoras de mamão do Brasil indicou alto grau de similaridade entre os isolados, que não formaram grupos geograficamente estruturados. Considerando-se o levantamento dos preços médios pagos ao produtor, os indicadores de rentabilidade para o mamão Havaí e Formosa são recomendáveis até 40% de perdas para meleira.Submitted by Renata Aline Souza Silva (rassilva@uefs.br) on 2023-01-26T12:46:03Z No. of bitstreams: 1 Tese _Alirio José da Cruz Neto_2020.pdf: 1272876 bytes, checksum: 6413b3815910685dab6b7437b1446868 (MD5)Made available in DSpace on 2023-01-26T12:46:03Z (GMT). No. of bitstreams: 1 Tese _Alirio José da Cruz Neto_2020.pdf: 1272876 bytes, checksum: 6413b3815910685dab6b7437b1446868 (MD5) Previous issue date: 2020-06-10Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESFundação de Amparo à Pesquisa do Estado da Bahia - FAPEBapplication/pdfporUniversidade Estadual de Feira de SantanaDoutorado Acadêmico em Recursos Genéticos VegetaisUEFSBrasilDEPARTAMENTO DE CIÊNCIAS BIOLÓGICASPMeVUmbravirusMamãoCarica papaya L.PMeVUmbravirusPapayaCarica papaya L.CIENCIAS AGRARIAS::AGRONOMIACIENCIAS AGRARIASEpidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis-32675240948481849496006006006006006005026123383450589282-309113871490760390778284247269066639193590462550136975366-8233071094704392586info:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UEFSinstname:Universidade Estadual de Feira de Santana (UEFS)instacron:UEFSORIGINALTese _Alirio José da Cruz Neto_2020.pdfTese _Alirio José da Cruz Neto_2020.pdfapplication/pdf1272876http://tede2.uefs.br:8080/bitstream/tede/1411/2/Tese+_Alirio+Jos%C3%A9+da+Cruz+Neto_2020.pdf6413b3815910685dab6b7437b1446868MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-82089http://tede2.uefs.br:8080/bitstream/tede/1411/1/license.txt7b5ba3d2445355f386edab96125d42b7MD51tede/14112023-01-26 09:46:03.645oai:tede2.uefs.br:8080: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Biblioteca Digital de Teses e Dissertaçõeshttp://tede2.uefs.br:8080/PUBhttp://tede2.uefs.br:8080/oai/requestbcuefs@uefs.br|| bcref@uefs.br||bcuefs@uefs.bropendoar:2023-01-26T12:46:03Biblioteca Digital de Teses e Dissertações da UEFS - Universidade Estadual de Feira de Santana (UEFS)false
dc.title.por.fl_str_mv Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)
title Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)
spellingShingle Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)
Cruz Neto, Alírio José da
PMeV
Umbravirus
Mamão
Carica papaya L.
PMeV
Umbravirus
Papaya
Carica papaya L.
CIENCIAS AGRARIAS::AGRONOMIA
CIENCIAS AGRARIAS
title_short Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)
title_full Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)
title_fullStr Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)
title_full_unstemmed Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)
title_sort Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira virus 2 (pmev2)
author Cruz Neto, Alírio José da
author_facet Cruz Neto, Alírio José da
author_role author
dc.contributor.advisor1.fl_str_mv Schnadelbach, Alessandra Selbach
dc.contributor.advisor1ID.fl_str_mv 64826520000
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/3534813150154706
dc.contributor.advisor-co1.fl_str_mv Barbosa, Cristiane de Jesus
dc.contributor.advisor-co1ID.fl_str_mv 45655642549
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/7210910955563939
dc.contributor.authorID.fl_str_mv 02965382569
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/5941996655570407
dc.contributor.author.fl_str_mv Cruz Neto, Alírio José da
contributor_str_mv Schnadelbach, Alessandra Selbach
Barbosa, Cristiane de Jesus
dc.subject.por.fl_str_mv PMeV
Umbravirus
Mamão
Carica papaya L.
topic PMeV
Umbravirus
Mamão
Carica papaya L.
PMeV
Umbravirus
Papaya
Carica papaya L.
CIENCIAS AGRARIAS::AGRONOMIA
CIENCIAS AGRARIAS
dc.subject.eng.fl_str_mv PMeV
Umbravirus
Papaya
Carica papaya L.
dc.subject.cnpq.fl_str_mv CIENCIAS AGRARIAS::AGRONOMIA
CIENCIAS AGRARIAS
description Bahia stands out among the largest papaya producing states in Brazil. Among the factors limiting the culture, the Papaya sticky disease, or “meleira” stands out. Honeydew is caused by the Papaya meleira virus (PMeV). Later, in plants with symptoms, a second virus was identified: Papaya meleira virus 2 (PMeV2). Thus, the disease has been called the PMeV Complex. In this sense, the objectives of this study were to identify risk factors for papaya honey in conditions in the extreme south of the state of Bahia; determine the spatio-temporal pattern of the disease in the region's cultivation conditions; characterize the genome of a PMeV2 isolate; to estimate the genetic diversity and phylogenetic relationships between PMeV2 isolates from orchards in northeastern Brazil and to know the damage caused by papaya in conventional cultivation of papaya in the extreme south of Bahia. Risk analyzes have shown that there is more risk that a mixed orchard may have meleira. Aggregation of diseased plants was observed in less than half of the evaluated areas. The analysis of isopathic areas indicated a tendency for epidemics to start from the edges of the orchards. However, there was no evidence of a higher incidence of honeydew at the edges of the orchards as the epidemics progressed, which suggests the occurrence of secondary outbreaks. The sequence obtained in this work, called PMeV2-RN, has 4,435 nucleotides and has about 94% identity with the isolate PMeV2-ES from Espírito Santo. The sequence contains two ORFs predicted at different reading stages, the first encoding a 238 amino acid polypeptide that has 88% identity with the corresponding PMeV2-ES protein, and the second encoding a 473 amino acid protein, which has 100% identity with the PMeV2-ES RdRp protein. Phylogenetic analyzes showed greater proximity between the isolate PMeV2-ES and the isolates PpVQ and PMeV-Mx than with PMeV2-RN, which seems to belong to a distinct strain of this virus. The analysis of the nucleotide sequences of the isolates from different papaya producing regions in Brazil indicated a high degree of similarity between the isolates, which did not form geographically structured groups. Considering the survey of the average prices paid to the producer, the profitability indicators for papaya Havaí and Formosa are recommended up to 40% of losses for meleira.
publishDate 2020
dc.date.issued.fl_str_mv 2020-06-10
dc.date.accessioned.fl_str_mv 2023-01-26T12:46:03Z
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dc.identifier.citation.fl_str_mv CRUZ NETO, Alírio José da. Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira vírus 2 (pmev2). 2020. 120 f. Tese (Doutorado em Recursos Genéticos Vegetais) - Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Feira de Santana, 2020.
dc.identifier.uri.fl_str_mv http://tede2.uefs.br:8080/handle/tede/1411
identifier_str_mv CRUZ NETO, Alírio José da. Epidemiologia e danos causados pela meleira do mamoeiro no estado da Bahia e diversidade genética do papaya meleira vírus 2 (pmev2). 2020. 120 f. Tese (Doutorado em Recursos Genéticos Vegetais) - Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Feira de Santana, 2020.
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