Resistance profile and virulence characterization of Escherichia coli isolated from diarrheic neonatal farm animals
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Semina. Ciências Agrárias (Online) |
Texto Completo: | https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/40548 |
Resumo: | Neonatal diarrhea is the main cause of early mortality and morbidity in farm animals and the source of huge, direct and indirect, economic husbandry losses. Escherichia coli, a common harmless commensal bacterium, can turn into a main diarrheal pathogen through antibiotic resistance and the expression of genetically acquired virulence factors. In this study, fecal samples obtained from eight farms of animals with clinical signs characteristic of diarrhea were subjected to culture and bacterial isolation. Colonies suggestive of E. coli were identified through morphological and biochemical characteristics. Susceptibility tests to the main veterinary antibacterial agents were conducted using agar disk diffusion followed by phenotypical detection of extended-spectrum ?-lactamase (ESBL). A total of 301 colonies were characterized as E. coli and, out of the 192 that were tested, 134 showed resistance to three or more classes of antimicrobial drugs and were classified as multidrug resistant (MDR), and 14 were ESBL positive. Bacterial DNA was extracted for multiplex PCR (mPCR) using primers to detect ten different genes of diarrheagenic E. coli (DEC). Thirty-six bacterial strains were positive in the mPCR assay, 28 of which were classified as enterotoxigenic E. coli (ETEC) and eight as enteropathogenic E. coli (EPEC). The high prevalence of MDR strains and the detection of ESBL denote the presence of resistance genes in animal husbandry; thus, it is important to isolate and characterize those pathogens and test antimicrobial sensitivity in vitro to avoid ineffective treatments and the spread of antimicrobial resistance, which are the major concerns of Public Health and One Health. |
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Semina. Ciências Agrárias (Online) |
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Resistance profile and virulence characterization of Escherichia coli isolated from diarrheic neonatal farm animalsPerfil de resistência e caracterização de virulência de Escherichia coli isoladas de animais de produção neonatos com diarreiaESBLE.coliFarm animalsMultidrug resistant bacteriamPCRNeonatal diarrhea.ESBLE. coliAnimais de produçãoBactérias multirresistentesmPCRDiarreia neonatal.Neonatal diarrhea is the main cause of early mortality and morbidity in farm animals and the source of huge, direct and indirect, economic husbandry losses. Escherichia coli, a common harmless commensal bacterium, can turn into a main diarrheal pathogen through antibiotic resistance and the expression of genetically acquired virulence factors. In this study, fecal samples obtained from eight farms of animals with clinical signs characteristic of diarrhea were subjected to culture and bacterial isolation. Colonies suggestive of E. coli were identified through morphological and biochemical characteristics. Susceptibility tests to the main veterinary antibacterial agents were conducted using agar disk diffusion followed by phenotypical detection of extended-spectrum ?-lactamase (ESBL). A total of 301 colonies were characterized as E. coli and, out of the 192 that were tested, 134 showed resistance to three or more classes of antimicrobial drugs and were classified as multidrug resistant (MDR), and 14 were ESBL positive. Bacterial DNA was extracted for multiplex PCR (mPCR) using primers to detect ten different genes of diarrheagenic E. coli (DEC). Thirty-six bacterial strains were positive in the mPCR assay, 28 of which were classified as enterotoxigenic E. coli (ETEC) and eight as enteropathogenic E. coli (EPEC). The high prevalence of MDR strains and the detection of ESBL denote the presence of resistance genes in animal husbandry; thus, it is important to isolate and characterize those pathogens and test antimicrobial sensitivity in vitro to avoid ineffective treatments and the spread of antimicrobial resistance, which are the major concerns of Public Health and One Health.Diarreias neonatais são as principais responsáveis por uma precoce mortalidade e morbidade em animais de criação, causando grandes perdas econômicas, direta e indiretamente, a qualquer fazenda de produção. Escherichia coli, normalmente uma bactéria comensal inofensiva, podem ser um dos principais patógenos diarreicos a partir da resistência a antimicrobianos e da expressão de fatores de virulência geneticamente adquiridos. Neste estudo, amostras de fezes obtidas de oito fazendas, de animais apresentando quadro diarreico, foram submetidas à cultura e isolamento bacteriano, e, as colônias sugestivas de E. coli foram identificadas através de características morfológicas e bioquímicas. Os testes de suscetibilidade aos principais agentes antibacterianos veterinários foram realizados por disco difusão em ágar seguida pela detecção fenotípica de ?-lactamase de espectro estendido (ESBL). Foram isoladas 301 colônias caracterizadas como E. coli e, de 192 testadas, 134 apresentaram resistência a três ou mais classes de antimicrobianos e 14 foram positivas para ESBL. O DNA bacteriano foi extraído para avaliação multiplex de PCR (mPCR) utilizando primers para detectar dez diferentes genes de E. coli diarreiogênicas. Trinta e seis bactérias atestaram positivas na mPCR, com 28 delas classificadas como E. coli enterotoxigênicas (ETEC) e oito E. coli enteropatogênicas (EPEC). A prevalência de cepas multirresistentes e a detecção de ESBL alertam para a presença de genes de resistência na criação animal, assim, é importante o isolamento e a caracterização desses patógenos, principalmente o teste da sensibilidade antimicrobiana in vitro, para evitar tratamentos ineficazes e a disseminação da resistência antimicrobiana que é uma das principais preocupações dentro da Saúde Pública e Saúde Única.UEL2021-02-24info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionbacterial isolation, antibiotic resistancecultura bacteriana, resistência a antibióticoapplication/pdfhttps://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/4054810.5433/1679-0359.2021v42n2p735Semina: Ciências Agrárias; Vol. 42 No. 2 (2021); 735-746Semina: Ciências Agrárias; v. 42 n. 2 (2021); 735-7461679-03591676-546Xreponame:Semina. Ciências Agrárias (Online)instname:Universidade Estadual de Londrina (UEL)instacron:UELenghttps://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/40548/29077Copyright (c) 2021 Semina: Ciências Agráriashttp://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessMainardi, Raffaella MeneghetiCosta, Arthur Roberto daChideroli, Roberta TorresFavero, Leonardo MantovaniAlfieri, Amauri AlcindoPereira, Ulisses de Pádua2022-10-04T14:08:24Zoai:ojs.pkp.sfu.ca:article/40548Revistahttp://www.uel.br/revistas/uel/index.php/semagrariasPUBhttps://ojs.uel.br/revistas/uel/index.php/semagrarias/oaisemina.agrarias@uel.br1679-03591676-546Xopendoar:2022-10-04T14:08:24Semina. Ciências Agrárias (Online) - Universidade Estadual de Londrina (UEL)false |
dc.title.none.fl_str_mv |
Resistance profile and virulence characterization of Escherichia coli isolated from diarrheic neonatal farm animals Perfil de resistência e caracterização de virulência de Escherichia coli isoladas de animais de produção neonatos com diarreia |
title |
Resistance profile and virulence characterization of Escherichia coli isolated from diarrheic neonatal farm animals |
spellingShingle |
Resistance profile and virulence characterization of Escherichia coli isolated from diarrheic neonatal farm animals Mainardi, Raffaella Menegheti ESBL E.coli Farm animals Multidrug resistant bacteria mPCR Neonatal diarrhea. ESBL E. coli Animais de produção Bactérias multirresistentes mPCR Diarreia neonatal. |
title_short |
Resistance profile and virulence characterization of Escherichia coli isolated from diarrheic neonatal farm animals |
title_full |
Resistance profile and virulence characterization of Escherichia coli isolated from diarrheic neonatal farm animals |
title_fullStr |
Resistance profile and virulence characterization of Escherichia coli isolated from diarrheic neonatal farm animals |
title_full_unstemmed |
Resistance profile and virulence characterization of Escherichia coli isolated from diarrheic neonatal farm animals |
title_sort |
Resistance profile and virulence characterization of Escherichia coli isolated from diarrheic neonatal farm animals |
author |
Mainardi, Raffaella Menegheti |
author_facet |
Mainardi, Raffaella Menegheti Costa, Arthur Roberto da Chideroli, Roberta Torres Favero, Leonardo Mantovani Alfieri, Amauri Alcindo Pereira, Ulisses de Pádua |
author_role |
author |
author2 |
Costa, Arthur Roberto da Chideroli, Roberta Torres Favero, Leonardo Mantovani Alfieri, Amauri Alcindo Pereira, Ulisses de Pádua |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Mainardi, Raffaella Menegheti Costa, Arthur Roberto da Chideroli, Roberta Torres Favero, Leonardo Mantovani Alfieri, Amauri Alcindo Pereira, Ulisses de Pádua |
dc.subject.por.fl_str_mv |
ESBL E.coli Farm animals Multidrug resistant bacteria mPCR Neonatal diarrhea. ESBL E. coli Animais de produção Bactérias multirresistentes mPCR Diarreia neonatal. |
topic |
ESBL E.coli Farm animals Multidrug resistant bacteria mPCR Neonatal diarrhea. ESBL E. coli Animais de produção Bactérias multirresistentes mPCR Diarreia neonatal. |
description |
Neonatal diarrhea is the main cause of early mortality and morbidity in farm animals and the source of huge, direct and indirect, economic husbandry losses. Escherichia coli, a common harmless commensal bacterium, can turn into a main diarrheal pathogen through antibiotic resistance and the expression of genetically acquired virulence factors. In this study, fecal samples obtained from eight farms of animals with clinical signs characteristic of diarrhea were subjected to culture and bacterial isolation. Colonies suggestive of E. coli were identified through morphological and biochemical characteristics. Susceptibility tests to the main veterinary antibacterial agents were conducted using agar disk diffusion followed by phenotypical detection of extended-spectrum ?-lactamase (ESBL). A total of 301 colonies were characterized as E. coli and, out of the 192 that were tested, 134 showed resistance to three or more classes of antimicrobial drugs and were classified as multidrug resistant (MDR), and 14 were ESBL positive. Bacterial DNA was extracted for multiplex PCR (mPCR) using primers to detect ten different genes of diarrheagenic E. coli (DEC). Thirty-six bacterial strains were positive in the mPCR assay, 28 of which were classified as enterotoxigenic E. coli (ETEC) and eight as enteropathogenic E. coli (EPEC). The high prevalence of MDR strains and the detection of ESBL denote the presence of resistance genes in animal husbandry; thus, it is important to isolate and characterize those pathogens and test antimicrobial sensitivity in vitro to avoid ineffective treatments and the spread of antimicrobial resistance, which are the major concerns of Public Health and One Health. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-02-24 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion bacterial isolation, antibiotic resistance cultura bacteriana, resistência a antibiótico |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/40548 10.5433/1679-0359.2021v42n2p735 |
url |
https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/40548 |
identifier_str_mv |
10.5433/1679-0359.2021v42n2p735 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/40548/29077 |
dc.rights.driver.fl_str_mv |
Copyright (c) 2021 Semina: Ciências Agrárias http://creativecommons.org/licenses/by-nc/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Copyright (c) 2021 Semina: Ciências Agrárias http://creativecommons.org/licenses/by-nc/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
UEL |
publisher.none.fl_str_mv |
UEL |
dc.source.none.fl_str_mv |
Semina: Ciências Agrárias; Vol. 42 No. 2 (2021); 735-746 Semina: Ciências Agrárias; v. 42 n. 2 (2021); 735-746 1679-0359 1676-546X reponame:Semina. Ciências Agrárias (Online) instname:Universidade Estadual de Londrina (UEL) instacron:UEL |
instname_str |
Universidade Estadual de Londrina (UEL) |
instacron_str |
UEL |
institution |
UEL |
reponame_str |
Semina. Ciências Agrárias (Online) |
collection |
Semina. Ciências Agrárias (Online) |
repository.name.fl_str_mv |
Semina. Ciências Agrárias (Online) - Universidade Estadual de Londrina (UEL) |
repository.mail.fl_str_mv |
semina.agrarias@uel.br |
_version_ |
1799306083382067200 |