Polimorfismos no gene do hormônio do crescimento associado a características de crescimento de Tilápia do Nilo
Autor(a) principal: | |
---|---|
Data de Publicação: | 2014 |
Tipo de documento: | Tese |
Idioma: | por |
Título da fonte: | Repositório Institucional da Universidade Estadual de Maringá (RI-UEM) |
Texto Completo: | http://repositorio.uem.br:8080/jspui/handle/1/1598 |
Resumo: | The growth hormone gene (GH) has been a point of study for many researchers because it has been shown that it acts in various physiological processes. Molecular techniques such as sequencing have enabled access to the genomic structure information of GH gene and its polymorphisms, some of these correlated with improved performance and/or production. Tilapia have two GH called GH1 and GH2 their genomic sequences are in the GENBANK database with access numbers of M97766.1 and M97765, respectively, when done the alignment of these sequences we found a high homology. However, there is the repetition of a microsatellite (CTGT) located at two base pairs of the exon 2, the GH1 has seven replications and GH2 has six replications. A pair of specific primers for the GH1 and GH2 genes that amplify a commum region, where the only expected difference are the four base pairs relating to repetition (CTGT) at least, previously described in GH2, shows a difference of approximately 50bp tilapia in some individuals of tilapia, thus defining two types of individuals when using the primer pair, those with a single fragment of 650bp called GHbs (GH single band) and those with two fragments 650pb and 700pb GHbd (GH band double). Given this observation the research objective was to characterize polymorphisms not yet reported GHbs and GHbd by sequencing technique for varieties of GIFT tilapia, Thai, Bouaké and some of its crossings and calculate the frequencies of these polymorphisms . From the results of sequencing GHbs came to be called GH/Ho individuals who are homozygous with the same number of repetitions (CTGT) in GH1 and GH2 and GHbd as GH/He individuals who are heterozygous with different number of repetitions (CTGT) in GH1 and GH2. Thus, the other objectives were to evaluate the relationship between the polymorphisms GH/HO and GH/He with the performance characteristics polymorphisms, assessing the growth of tilapia GIFT x Thai in a period of 150 days and analyze the hyperplastic and hypertrophic growth of white muscle at 30-60-90 and 120 days of age tilapia, being collected right lateral muscle which was insert paraffin for semi-serial cuts and hematoxylin-eosin staining. The results of sequencing revealed that, when made the sequences aliggnments of genotypes GHbs and GHbd these have mutations as transversions, transitions and deletions when compared to the sequences of the GH1 and GH2 genes. It was also described that individuals can be either homozygous (GH/Ho) or heterozygous (GH/He) with respect to the number of the microsatellite repeats (CTGT) in GH1 and GH2. The genotype frequencies in Thai variety and crossing Thai Thai x GIFT showed 50% of GH/HE and GH/Ho, GIFT of fifth generation from a breeding program showed 90% of GH/Ho and crossing GIFT x Bouake (GXB) found up 100% of individuals GH/He. The results of the morphometric and performance was a significant effect of amplification pattern GH/He for final weight (FW), weight gain (WG), total length (TL), head length (CCAB), head weight was observed (PCAB), weight of gutted fish (PPevis) and weight of skinless fillet (pFILE). Histological evaluations of white muscle fibers of the genotypes showed no significant difference in the frequencies for most ages considered. We can conclude that both GH1 and GH2 may have 6 or 7 repeats of microsatellite CTGT, other low-frequency polymorphisms can be found in the studied region of the GH gene in variety GIFT and frequencies of GH/HO or GH/He may be associated with variety. Evaluations of performance the GH/He individuals showed significant differences for some features, however, it takes a study to examine whether there is change in the amino acid or regulatory regions of the GH gene, yet in the growth of white muscle there are no differences between the polymorphisms. |
id |
UEM-10_19f33168715d879edec7978266ef841e |
---|---|
oai_identifier_str |
oai:localhost:1/1598 |
network_acronym_str |
UEM-10 |
network_name_str |
Repositório Institucional da Universidade Estadual de Maringá (RI-UEM) |
repository_id_str |
|
spelling |
Polimorfismos no gene do hormônio do crescimento associado a características de crescimento de Tilápia do NiloAquiculturaTilápia do NiloHormônio do crescimentoGenePolimorfismosFibras musculares, Brasil.Growth hormonePolymorphismsTilápiaBrazil.Ciências AgráriasZootecniaThe growth hormone gene (GH) has been a point of study for many researchers because it has been shown that it acts in various physiological processes. Molecular techniques such as sequencing have enabled access to the genomic structure information of GH gene and its polymorphisms, some of these correlated with improved performance and/or production. Tilapia have two GH called GH1 and GH2 their genomic sequences are in the GENBANK database with access numbers of M97766.1 and M97765, respectively, when done the alignment of these sequences we found a high homology. However, there is the repetition of a microsatellite (CTGT) located at two base pairs of the exon 2, the GH1 has seven replications and GH2 has six replications. A pair of specific primers for the GH1 and GH2 genes that amplify a commum region, where the only expected difference are the four base pairs relating to repetition (CTGT) at least, previously described in GH2, shows a difference of approximately 50bp tilapia in some individuals of tilapia, thus defining two types of individuals when using the primer pair, those with a single fragment of 650bp called GHbs (GH single band) and those with two fragments 650pb and 700pb GHbd (GH band double). Given this observation the research objective was to characterize polymorphisms not yet reported GHbs and GHbd by sequencing technique for varieties of GIFT tilapia, Thai, Bouaké and some of its crossings and calculate the frequencies of these polymorphisms . From the results of sequencing GHbs came to be called GH/Ho individuals who are homozygous with the same number of repetitions (CTGT) in GH1 and GH2 and GHbd as GH/He individuals who are heterozygous with different number of repetitions (CTGT) in GH1 and GH2. Thus, the other objectives were to evaluate the relationship between the polymorphisms GH/HO and GH/He with the performance characteristics polymorphisms, assessing the growth of tilapia GIFT x Thai in a period of 150 days and analyze the hyperplastic and hypertrophic growth of white muscle at 30-60-90 and 120 days of age tilapia, being collected right lateral muscle which was insert paraffin for semi-serial cuts and hematoxylin-eosin staining. The results of sequencing revealed that, when made the sequences aliggnments of genotypes GHbs and GHbd these have mutations as transversions, transitions and deletions when compared to the sequences of the GH1 and GH2 genes. It was also described that individuals can be either homozygous (GH/Ho) or heterozygous (GH/He) with respect to the number of the microsatellite repeats (CTGT) in GH1 and GH2. The genotype frequencies in Thai variety and crossing Thai Thai x GIFT showed 50% of GH/HE and GH/Ho, GIFT of fifth generation from a breeding program showed 90% of GH/Ho and crossing GIFT x Bouake (GXB) found up 100% of individuals GH/He. The results of the morphometric and performance was a significant effect of amplification pattern GH/He for final weight (FW), weight gain (WG), total length (TL), head length (CCAB), head weight was observed (PCAB), weight of gutted fish (PPevis) and weight of skinless fillet (pFILE). Histological evaluations of white muscle fibers of the genotypes showed no significant difference in the frequencies for most ages considered. We can conclude that both GH1 and GH2 may have 6 or 7 repeats of microsatellite CTGT, other low-frequency polymorphisms can be found in the studied region of the GH gene in variety GIFT and frequencies of GH/HO or GH/He may be associated with variety. Evaluations of performance the GH/He individuals showed significant differences for some features, however, it takes a study to examine whether there is change in the amino acid or regulatory regions of the GH gene, yet in the growth of white muscle there are no differences between the polymorphisms.O gene hormônio do crescimento (GH) tem sido ponto de estudo para muitos pesquisadores, pois se tem demonstrado que ele atua em vários processos fisiológicos. Técnicas moleculares como o sequenciamento, têm permitido o acesso à informação da estrutura genômica do gene GH e seus polimorfismos, alguns destes relacionados com melhores desempenhos e/ou produção. As tilápias apresentam dois GH chamados de GH1 e GH2 suas sequências se encontram no banco genômico GENBANK, com números de acesso M97766.1 e M97765 respectivamente, quando feito o alinhamento destas sequências, encontramos uma alta homologia. No entanto, observa-se a repetição de um microssatélite (CTGT) localizado a dois pares de bases do éxon 2. O GH1 apresenta sete repetições e o GH2 seis repetições. Um par de primers específicos para os genes GH1 e GH2 que amplificam uma região comum, onde a única diferença esperada são os quatro pares de bases referentes à repetição (CTGT) a menos, anteriormente descrita em GH2, e apresenta uma diferença de aproximadamente 50pb em alguns indivíduos de tilápias, definindo assim, dois tipos de indivíduos quando usado o par de primers: aqueles que apresentam um só fragmento de 650 pb chamados de GHbs (GH banda simples) e os que apresentam dois fragmentos 650pb e 700pb GHbd (GH banda dupla). Ante esta observação, o objetivo da pesquisa foi caracterizar polimorfismos ainda não reportados GHbs e GHbd, por meio da técnica de sequenciamento para variedades de tilápia GIFT, Tailandesa, Bouaké e alguns dos seus cruzamentos e calcular as frequências destes polimorfismos. A partir dos resultados do sequenciamento GHbs, passou a ser chamado GH/Ho indivíduos que se encontram em homozigose com o mesmo número de repetições (CTGT) em GH1 e GH2 e GHbd como GH/He indivíduos que se encontram em heterozigose com número diferente de repetições (CTGT) em GH1 e GH2. Sendo assim, os outros objetivos, como avaliar a relação que existe entre os polimorfismos GH/Ho e GH/He com as características de desempenho, sendo feita avaliação do crescimento de tilápias GIFT x xvii Tailandesa num período de 150 dias e analisar o crescimento hipertrófico e hiperplásico do músculo branco aos 30-60-90 e 120 dias de idade das tilápias, sendo coletado músculo lateral direito que foi incluído em parafina para cortes semi-seriados e coloração hematoxilina-eosina. Os resultados do seqüenciamento mostraram que, quando feitos os alinhamentos das seqüência dos genótipos GHbs e GHbd, estes apresentam mutações pontuais como transversões, transições e deleções, quando comparadas com as seqüências dos genes GH1 e GH2. Também foi descrito que os indivíduos podem estar tanto em homozigose (GH/Ho) ou heterozigose (GH/He) com relação ao número de repetições do microssatélite (CTGT) em GH1 e GH2. As freqüências dos genótipos na variedade Tailandesa e cruzamento GIFT x Tailandesa apresentaram 50% de GH/He e GH/Ho, GIFT da quinta geração proveniente de um programa de melhoramento apresentou 90% de GH/Ho e cruzamentos GIFT x Bouake (GxB) verificou-se 100% de indivíduos GH/He. Nos resultados para as características morfométricas e de desempenho, foi observado efeito significativo do padrão de amplificação GH/He para peso final (PF), ganho em peso (GP), comprimento total (CT), comprimento de cabeça (CCAB), peso de cabeça (PCAB), peso de peixe eviscerado (PPevis) e peso do filé sem pele (PFilé). As avaliações histológicas das fibras musculares brancas dos genótipos não apresentaram diferença significativa nas freqüências para a maioria das idades consideradas. Podemos concluir que, tanto GH1 e GH2 podem apresentar 6 ou 7 repetições do microssatélite CTGT, outros polimorfismos de baixa freqüência podem ser encontrados na região estudada do gene GH na variedade GIFT e as freqüências de GH/Ho ou GH/He podem estar associadas à variedade. Nas avaliações do desempenho, os indivíduos GH/He apresentaram diferenças significativas para algumas características, no entanto, é preciso um estudo que verifique se existe alteração nos aminoácidos ou regiões regulatórias do gene GH, já no crescimento do músculo branco não se encontram diferenças entre os polimorfismos.xix, 62 fUniversidade Estadual de MaringáBrasilDepartamento de ZootecniaPrograma de Pós-Graduação em ZootecniaUEMMaringá, PRCentro de Ciências AgráriasEliane GasparinoSandra Maria Simonelli - CESUMARRobie Allan Bombardelli - UNIOESTENelson Maurício Lopera Barreto - UEMChristiano Rodrigues Schamber - UEMRodriguez Rodriguez, Maria Del Pilar2018-04-06T17:14:29Z2018-04-06T17:14:29Z2014info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesishttp://repositorio.uem.br:8080/jspui/handle/1/1598porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da Universidade Estadual de Maringá (RI-UEM)instname:Universidade Estadual de Maringá (UEM)instacron:UEM2018-10-16T17:25:06Zoai:localhost:1/1598Repositório InstitucionalPUBhttp://repositorio.uem.br:8080/oai/requestopendoar:2024-04-23T14:54:34.170090Repositório Institucional da Universidade Estadual de Maringá (RI-UEM) - Universidade Estadual de Maringá (UEM)false |
dc.title.none.fl_str_mv |
Polimorfismos no gene do hormônio do crescimento associado a características de crescimento de Tilápia do Nilo |
title |
Polimorfismos no gene do hormônio do crescimento associado a características de crescimento de Tilápia do Nilo |
spellingShingle |
Polimorfismos no gene do hormônio do crescimento associado a características de crescimento de Tilápia do Nilo Rodriguez Rodriguez, Maria Del Pilar Aquicultura Tilápia do Nilo Hormônio do crescimento Gene Polimorfismos Fibras musculares, Brasil. Growth hormone Polymorphisms Tilápia Brazil. Ciências Agrárias Zootecnia |
title_short |
Polimorfismos no gene do hormônio do crescimento associado a características de crescimento de Tilápia do Nilo |
title_full |
Polimorfismos no gene do hormônio do crescimento associado a características de crescimento de Tilápia do Nilo |
title_fullStr |
Polimorfismos no gene do hormônio do crescimento associado a características de crescimento de Tilápia do Nilo |
title_full_unstemmed |
Polimorfismos no gene do hormônio do crescimento associado a características de crescimento de Tilápia do Nilo |
title_sort |
Polimorfismos no gene do hormônio do crescimento associado a características de crescimento de Tilápia do Nilo |
author |
Rodriguez Rodriguez, Maria Del Pilar |
author_facet |
Rodriguez Rodriguez, Maria Del Pilar |
author_role |
author |
dc.contributor.none.fl_str_mv |
Eliane Gasparino Sandra Maria Simonelli - CESUMAR Robie Allan Bombardelli - UNIOESTE Nelson Maurício Lopera Barreto - UEM Christiano Rodrigues Schamber - UEM |
dc.contributor.author.fl_str_mv |
Rodriguez Rodriguez, Maria Del Pilar |
dc.subject.por.fl_str_mv |
Aquicultura Tilápia do Nilo Hormônio do crescimento Gene Polimorfismos Fibras musculares, Brasil. Growth hormone Polymorphisms Tilápia Brazil. Ciências Agrárias Zootecnia |
topic |
Aquicultura Tilápia do Nilo Hormônio do crescimento Gene Polimorfismos Fibras musculares, Brasil. Growth hormone Polymorphisms Tilápia Brazil. Ciências Agrárias Zootecnia |
description |
The growth hormone gene (GH) has been a point of study for many researchers because it has been shown that it acts in various physiological processes. Molecular techniques such as sequencing have enabled access to the genomic structure information of GH gene and its polymorphisms, some of these correlated with improved performance and/or production. Tilapia have two GH called GH1 and GH2 their genomic sequences are in the GENBANK database with access numbers of M97766.1 and M97765, respectively, when done the alignment of these sequences we found a high homology. However, there is the repetition of a microsatellite (CTGT) located at two base pairs of the exon 2, the GH1 has seven replications and GH2 has six replications. A pair of specific primers for the GH1 and GH2 genes that amplify a commum region, where the only expected difference are the four base pairs relating to repetition (CTGT) at least, previously described in GH2, shows a difference of approximately 50bp tilapia in some individuals of tilapia, thus defining two types of individuals when using the primer pair, those with a single fragment of 650bp called GHbs (GH single band) and those with two fragments 650pb and 700pb GHbd (GH band double). Given this observation the research objective was to characterize polymorphisms not yet reported GHbs and GHbd by sequencing technique for varieties of GIFT tilapia, Thai, Bouaké and some of its crossings and calculate the frequencies of these polymorphisms . From the results of sequencing GHbs came to be called GH/Ho individuals who are homozygous with the same number of repetitions (CTGT) in GH1 and GH2 and GHbd as GH/He individuals who are heterozygous with different number of repetitions (CTGT) in GH1 and GH2. Thus, the other objectives were to evaluate the relationship between the polymorphisms GH/HO and GH/He with the performance characteristics polymorphisms, assessing the growth of tilapia GIFT x Thai in a period of 150 days and analyze the hyperplastic and hypertrophic growth of white muscle at 30-60-90 and 120 days of age tilapia, being collected right lateral muscle which was insert paraffin for semi-serial cuts and hematoxylin-eosin staining. The results of sequencing revealed that, when made the sequences aliggnments of genotypes GHbs and GHbd these have mutations as transversions, transitions and deletions when compared to the sequences of the GH1 and GH2 genes. It was also described that individuals can be either homozygous (GH/Ho) or heterozygous (GH/He) with respect to the number of the microsatellite repeats (CTGT) in GH1 and GH2. The genotype frequencies in Thai variety and crossing Thai Thai x GIFT showed 50% of GH/HE and GH/Ho, GIFT of fifth generation from a breeding program showed 90% of GH/Ho and crossing GIFT x Bouake (GXB) found up 100% of individuals GH/He. The results of the morphometric and performance was a significant effect of amplification pattern GH/He for final weight (FW), weight gain (WG), total length (TL), head length (CCAB), head weight was observed (PCAB), weight of gutted fish (PPevis) and weight of skinless fillet (pFILE). Histological evaluations of white muscle fibers of the genotypes showed no significant difference in the frequencies for most ages considered. We can conclude that both GH1 and GH2 may have 6 or 7 repeats of microsatellite CTGT, other low-frequency polymorphisms can be found in the studied region of the GH gene in variety GIFT and frequencies of GH/HO or GH/He may be associated with variety. Evaluations of performance the GH/He individuals showed significant differences for some features, however, it takes a study to examine whether there is change in the amino acid or regulatory regions of the GH gene, yet in the growth of white muscle there are no differences between the polymorphisms. |
publishDate |
2014 |
dc.date.none.fl_str_mv |
2014 2018-04-06T17:14:29Z 2018-04-06T17:14:29Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/doctoralThesis |
format |
doctoralThesis |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://repositorio.uem.br:8080/jspui/handle/1/1598 |
url |
http://repositorio.uem.br:8080/jspui/handle/1/1598 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Universidade Estadual de Maringá Brasil Departamento de Zootecnia Programa de Pós-Graduação em Zootecnia UEM Maringá, PR Centro de Ciências Agrárias |
publisher.none.fl_str_mv |
Universidade Estadual de Maringá Brasil Departamento de Zootecnia Programa de Pós-Graduação em Zootecnia UEM Maringá, PR Centro de Ciências Agrárias |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da Universidade Estadual de Maringá (RI-UEM) instname:Universidade Estadual de Maringá (UEM) instacron:UEM |
instname_str |
Universidade Estadual de Maringá (UEM) |
instacron_str |
UEM |
institution |
UEM |
reponame_str |
Repositório Institucional da Universidade Estadual de Maringá (RI-UEM) |
collection |
Repositório Institucional da Universidade Estadual de Maringá (RI-UEM) |
repository.name.fl_str_mv |
Repositório Institucional da Universidade Estadual de Maringá (RI-UEM) - Universidade Estadual de Maringá (UEM) |
repository.mail.fl_str_mv |
|
_version_ |
1813258642487508992 |