Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markers
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Acta Scientiarum. Agronomy (Online) |
Texto Completo: | http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/19307 |
Resumo: | Eucalyptus cladocalyx F. Muell is a tree endemic to southern Australia and is distributed across four isolated regions: Kangaroo Island, southern Flinders Ranges, and two geographical zones in Eyre Peninsula. E. cladocalyx is capable of growing under extreme environmental conditions, including dry and saline soils. The objective of this study was to analyze genetic diversity in 45 half-sib families planted in northern Chile that are distributed across five different zones (provenances). Genetic variability was assessed using ISSR (Inter Simple Sequence Repeat) molecular markers. The results showed low levels of genetic diversity within populations (He = 0.113 to 0.268) in contrast with other Eucalyptus species. In addition, there was a significant genetic differentiation among provenances (Φst = 0.14); populations from the Kangaroo Island provenance showed more differentiation than any other population. These results are in agreement with previous studies of the species. Our study revealed that Chilean resources are a representative sample of Australian populations; therefore, the germplasm planted in northern Chile would be sufficient for the development of improvement programs. ISSR-Marker technology could be an alternative to identify genotypes of interest in material selection. |
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Acta Scientiarum. Agronomy (Online) |
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Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markersDNA poolinghalf-sib familiesAMOVAclustering analysisEucalyptus cladocalyx F. Muell is a tree endemic to southern Australia and is distributed across four isolated regions: Kangaroo Island, southern Flinders Ranges, and two geographical zones in Eyre Peninsula. E. cladocalyx is capable of growing under extreme environmental conditions, including dry and saline soils. The objective of this study was to analyze genetic diversity in 45 half-sib families planted in northern Chile that are distributed across five different zones (provenances). Genetic variability was assessed using ISSR (Inter Simple Sequence Repeat) molecular markers. The results showed low levels of genetic diversity within populations (He = 0.113 to 0.268) in contrast with other Eucalyptus species. In addition, there was a significant genetic differentiation among provenances (Φst = 0.14); populations from the Kangaroo Island provenance showed more differentiation than any other population. These results are in agreement with previous studies of the species. Our study revealed that Chilean resources are a representative sample of Australian populations; therefore, the germplasm planted in northern Chile would be sufficient for the development of improvement programs. ISSR-Marker technology could be an alternative to identify genotypes of interest in material selection. Universidade Estadual de Maringá2015-05-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/1930710.4025/actasciagron.v37i2.19307Acta Scientiarum. Agronomy; Vol 37 No 2 (2015); 133-140Acta Scientiarum. Agronomy; v. 37 n. 2 (2015); 133-1401807-86211679-9275reponame:Acta Scientiarum. Agronomy (Online)instname:Universidade Estadual de Maringá (UEM)instacron:UEMenghttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/19307/pdf_76Ballesta, PaulinaMora, FreddyContreras-Soto, Rodrigo IvanRuiz, EduardoPerret, Sandrainfo:eu-repo/semantics/openAccess2015-05-06T09:09:10Zoai:periodicos.uem.br/ojs:article/19307Revistahttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgronPUBhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/oaiactaagron@uem.br||actaagron@uem.br|| edamasio@uem.br1807-86211679-9275opendoar:2015-05-06T09:09:10Acta Scientiarum. Agronomy (Online) - Universidade Estadual de Maringá (UEM)false |
dc.title.none.fl_str_mv |
Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markers |
title |
Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markers |
spellingShingle |
Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markers Ballesta, Paulina DNA pooling half-sib families AMOVA clustering analysis |
title_short |
Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markers |
title_full |
Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markers |
title_fullStr |
Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markers |
title_full_unstemmed |
Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markers |
title_sort |
Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markers |
author |
Ballesta, Paulina |
author_facet |
Ballesta, Paulina Mora, Freddy Contreras-Soto, Rodrigo Ivan Ruiz, Eduardo Perret, Sandra |
author_role |
author |
author2 |
Mora, Freddy Contreras-Soto, Rodrigo Ivan Ruiz, Eduardo Perret, Sandra |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Ballesta, Paulina Mora, Freddy Contreras-Soto, Rodrigo Ivan Ruiz, Eduardo Perret, Sandra |
dc.subject.por.fl_str_mv |
DNA pooling half-sib families AMOVA clustering analysis |
topic |
DNA pooling half-sib families AMOVA clustering analysis |
description |
Eucalyptus cladocalyx F. Muell is a tree endemic to southern Australia and is distributed across four isolated regions: Kangaroo Island, southern Flinders Ranges, and two geographical zones in Eyre Peninsula. E. cladocalyx is capable of growing under extreme environmental conditions, including dry and saline soils. The objective of this study was to analyze genetic diversity in 45 half-sib families planted in northern Chile that are distributed across five different zones (provenances). Genetic variability was assessed using ISSR (Inter Simple Sequence Repeat) molecular markers. The results showed low levels of genetic diversity within populations (He = 0.113 to 0.268) in contrast with other Eucalyptus species. In addition, there was a significant genetic differentiation among provenances (Φst = 0.14); populations from the Kangaroo Island provenance showed more differentiation than any other population. These results are in agreement with previous studies of the species. Our study revealed that Chilean resources are a representative sample of Australian populations; therefore, the germplasm planted in northern Chile would be sufficient for the development of improvement programs. ISSR-Marker technology could be an alternative to identify genotypes of interest in material selection. |
publishDate |
2015 |
dc.date.none.fl_str_mv |
2015-05-04 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/19307 10.4025/actasciagron.v37i2.19307 |
url |
http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/19307 |
identifier_str_mv |
10.4025/actasciagron.v37i2.19307 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/19307/pdf_76 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Estadual de Maringá |
publisher.none.fl_str_mv |
Universidade Estadual de Maringá |
dc.source.none.fl_str_mv |
Acta Scientiarum. Agronomy; Vol 37 No 2 (2015); 133-140 Acta Scientiarum. Agronomy; v. 37 n. 2 (2015); 133-140 1807-8621 1679-9275 reponame:Acta Scientiarum. Agronomy (Online) instname:Universidade Estadual de Maringá (UEM) instacron:UEM |
instname_str |
Universidade Estadual de Maringá (UEM) |
instacron_str |
UEM |
institution |
UEM |
reponame_str |
Acta Scientiarum. Agronomy (Online) |
collection |
Acta Scientiarum. Agronomy (Online) |
repository.name.fl_str_mv |
Acta Scientiarum. Agronomy (Online) - Universidade Estadual de Maringá (UEM) |
repository.mail.fl_str_mv |
actaagron@uem.br||actaagron@uem.br|| edamasio@uem.br |
_version_ |
1799305909288042496 |