Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142

Detalhes bibliográficos
Autor(a) principal: Tardin, Flávio Dessune
Data de Publicação: 2008
Outros Autores: Amaral Júnior, Antonio Teixeira do, Pereira, Messias Gonzaga, Vidigal, Maria Celeste Gonçalves, Daher, Rogério Figueiredo, Scapim, Carlos Alberto
Tipo de documento: Artigo
Idioma: por
Título da fonte: Acta Scientiarum. Agronomy (Online)
Texto Completo: http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/2142
Resumo: Twenty lettuce accessions from the UENF Germplasm Collection were assessed for genetic diversity using RAPD markers. Multivariate statistical techniques were used, such as grouping analyses, using the Tocher and Single Linkage methods. Analysis of 55 polymorphic markers, obtained with 25 primers, showed that there was sufficient variability in the material studied to be exploited in future breeding programs. The ‘BGH 4060’ and ‘Grand Rapids’ accessions were the most dissimilar, while ‘BGH 4325’ and ‘BGH 4326' were the most similar. There was high agreement between ecogeographic origin and molecular similarity. It was further found by the stress statistic (Kruskal, 1964) and by the correlation between number of markers and increase in ideal formation of groups that 50 polymorphic markers is the optimum number for genetic diversity study in the assessed accessions.
id UEM-5_dc154a9f772abae385bafb2af2c66595
oai_identifier_str oai:periodicos.uem.br/ojs:article/2142
network_acronym_str UEM-5
network_name_str Acta Scientiarum. Agronomy (Online)
repository_id_str
spelling Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142Variabilidade genética em alface (Lactuca sativa L.) e determinação do número ótimo de marcas RAPD para estudos de diversidade molecular - DOI: 10.4025/actasciagron.v25i1.2142Lactuca sativadiversidade genéticamarcadores RAPD5.00.00.00-4 Ciências AgráriasTwenty lettuce accessions from the UENF Germplasm Collection were assessed for genetic diversity using RAPD markers. Multivariate statistical techniques were used, such as grouping analyses, using the Tocher and Single Linkage methods. Analysis of 55 polymorphic markers, obtained with 25 primers, showed that there was sufficient variability in the material studied to be exploited in future breeding programs. The ‘BGH 4060’ and ‘Grand Rapids’ accessions were the most dissimilar, while ‘BGH 4325’ and ‘BGH 4326' were the most similar. There was high agreement between ecogeographic origin and molecular similarity. It was further found by the stress statistic (Kruskal, 1964) and by the correlation between number of markers and increase in ideal formation of groups that 50 polymorphic markers is the optimum number for genetic diversity study in the assessed accessions.Vinte acessos de alface da Coleção de Germoplasma da UENF foram avaliados quanto à diversidade genética, pelo uso de marcadores RAPD. Foram empregadas técnicas estatísticas multivariadas, como análises de agrupamento, utilizando-se os métodos de Tocher e ‘Hierárquico do Vizinho Mais Próximo’. Pela análise de 55 fragmentos polimórficos obtidos com 25 ‘primers’, os acessos BGH 4060 e Grand Rapids foram os mais dissimilares, enquanto Regina e Repolhuda Todo Ano foram os mais semelhantes. Constatou-se elevada concordância entre a origem ecogeográfica e a similaridade molecular. Verificou-se, ainda, que 50 fragmentos polimórficos foram o número ótimo de marcadores para uma análise segura da diversidade genética nos acessos avaliados.Universidade Estadual de Maringá2008-04-23info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/214210.4025/actasciagron.v25i1.2142Acta Scientiarum. Agronomy; Vol 25 No 1 (2003); 1-5Acta Scientiarum. Agronomy; v. 25 n. 1 (2003); 1-51807-86211679-9275reponame:Acta Scientiarum. Agronomy (Online)instname:Universidade Estadual de Maringá (UEM)instacron:UEMporhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/2142/1623Tardin, Flávio DessuneAmaral Júnior, Antonio Teixeira doPereira, Messias GonzagaVidigal, Maria Celeste GonçalvesDaher, Rogério FigueiredoScapim, Carlos Albertoinfo:eu-repo/semantics/openAccess2022-11-23T18:37:43Zoai:periodicos.uem.br/ojs:article/2142Revistahttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgronPUBhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/oaiactaagron@uem.br||actaagron@uem.br|| edamasio@uem.br1807-86211679-9275opendoar:2022-11-23T18:37:43Acta Scientiarum. Agronomy (Online) - Universidade Estadual de Maringá (UEM)false
dc.title.none.fl_str_mv Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142
Variabilidade genética em alface (Lactuca sativa L.) e determinação do número ótimo de marcas RAPD para estudos de diversidade molecular - DOI: 10.4025/actasciagron.v25i1.2142
title Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142
spellingShingle Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142
Tardin, Flávio Dessune
Lactuca sativa
diversidade genética
marcadores RAPD
5.00.00.00-4 Ciências Agrárias
title_short Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142
title_full Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142
title_fullStr Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142
title_full_unstemmed Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142
title_sort Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142
author Tardin, Flávio Dessune
author_facet Tardin, Flávio Dessune
Amaral Júnior, Antonio Teixeira do
Pereira, Messias Gonzaga
Vidigal, Maria Celeste Gonçalves
Daher, Rogério Figueiredo
Scapim, Carlos Alberto
author_role author
author2 Amaral Júnior, Antonio Teixeira do
Pereira, Messias Gonzaga
Vidigal, Maria Celeste Gonçalves
Daher, Rogério Figueiredo
Scapim, Carlos Alberto
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Tardin, Flávio Dessune
Amaral Júnior, Antonio Teixeira do
Pereira, Messias Gonzaga
Vidigal, Maria Celeste Gonçalves
Daher, Rogério Figueiredo
Scapim, Carlos Alberto
dc.subject.por.fl_str_mv Lactuca sativa
diversidade genética
marcadores RAPD
5.00.00.00-4 Ciências Agrárias
topic Lactuca sativa
diversidade genética
marcadores RAPD
5.00.00.00-4 Ciências Agrárias
description Twenty lettuce accessions from the UENF Germplasm Collection were assessed for genetic diversity using RAPD markers. Multivariate statistical techniques were used, such as grouping analyses, using the Tocher and Single Linkage methods. Analysis of 55 polymorphic markers, obtained with 25 primers, showed that there was sufficient variability in the material studied to be exploited in future breeding programs. The ‘BGH 4060’ and ‘Grand Rapids’ accessions were the most dissimilar, while ‘BGH 4325’ and ‘BGH 4326' were the most similar. There was high agreement between ecogeographic origin and molecular similarity. It was further found by the stress statistic (Kruskal, 1964) and by the correlation between number of markers and increase in ideal formation of groups that 50 polymorphic markers is the optimum number for genetic diversity study in the assessed accessions.
publishDate 2008
dc.date.none.fl_str_mv 2008-04-23
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/2142
10.4025/actasciagron.v25i1.2142
url http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/2142
identifier_str_mv 10.4025/actasciagron.v25i1.2142
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/2142/1623
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Estadual de Maringá
publisher.none.fl_str_mv Universidade Estadual de Maringá
dc.source.none.fl_str_mv Acta Scientiarum. Agronomy; Vol 25 No 1 (2003); 1-5
Acta Scientiarum. Agronomy; v. 25 n. 1 (2003); 1-5
1807-8621
1679-9275
reponame:Acta Scientiarum. Agronomy (Online)
instname:Universidade Estadual de Maringá (UEM)
instacron:UEM
instname_str Universidade Estadual de Maringá (UEM)
instacron_str UEM
institution UEM
reponame_str Acta Scientiarum. Agronomy (Online)
collection Acta Scientiarum. Agronomy (Online)
repository.name.fl_str_mv Acta Scientiarum. Agronomy (Online) - Universidade Estadual de Maringá (UEM)
repository.mail.fl_str_mv actaagron@uem.br||actaagron@uem.br|| edamasio@uem.br
_version_ 1799305905154555904