Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142
Autor(a) principal: | |
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Data de Publicação: | 2008 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Acta Scientiarum. Agronomy (Online) |
Texto Completo: | http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/2142 |
Resumo: | Twenty lettuce accessions from the UENF Germplasm Collection were assessed for genetic diversity using RAPD markers. Multivariate statistical techniques were used, such as grouping analyses, using the Tocher and Single Linkage methods. Analysis of 55 polymorphic markers, obtained with 25 primers, showed that there was sufficient variability in the material studied to be exploited in future breeding programs. The ‘BGH 4060’ and ‘Grand Rapids’ accessions were the most dissimilar, while ‘BGH 4325’ and ‘BGH 4326' were the most similar. There was high agreement between ecogeographic origin and molecular similarity. It was further found by the stress statistic (Kruskal, 1964) and by the correlation between number of markers and increase in ideal formation of groups that 50 polymorphic markers is the optimum number for genetic diversity study in the assessed accessions. |
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Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142Variabilidade genética em alface (Lactuca sativa L.) e determinação do número ótimo de marcas RAPD para estudos de diversidade molecular - DOI: 10.4025/actasciagron.v25i1.2142Lactuca sativadiversidade genéticamarcadores RAPD5.00.00.00-4 Ciências AgráriasTwenty lettuce accessions from the UENF Germplasm Collection were assessed for genetic diversity using RAPD markers. Multivariate statistical techniques were used, such as grouping analyses, using the Tocher and Single Linkage methods. Analysis of 55 polymorphic markers, obtained with 25 primers, showed that there was sufficient variability in the material studied to be exploited in future breeding programs. The ‘BGH 4060’ and ‘Grand Rapids’ accessions were the most dissimilar, while ‘BGH 4325’ and ‘BGH 4326' were the most similar. There was high agreement between ecogeographic origin and molecular similarity. It was further found by the stress statistic (Kruskal, 1964) and by the correlation between number of markers and increase in ideal formation of groups that 50 polymorphic markers is the optimum number for genetic diversity study in the assessed accessions.Vinte acessos de alface da Coleção de Germoplasma da UENF foram avaliados quanto à diversidade genética, pelo uso de marcadores RAPD. Foram empregadas técnicas estatísticas multivariadas, como análises de agrupamento, utilizando-se os métodos de Tocher e ‘Hierárquico do Vizinho Mais Próximo’. Pela análise de 55 fragmentos polimórficos obtidos com 25 ‘primers’, os acessos BGH 4060 e Grand Rapids foram os mais dissimilares, enquanto Regina e Repolhuda Todo Ano foram os mais semelhantes. Constatou-se elevada concordância entre a origem ecogeográfica e a similaridade molecular. Verificou-se, ainda, que 50 fragmentos polimórficos foram o número ótimo de marcadores para uma análise segura da diversidade genética nos acessos avaliados.Universidade Estadual de Maringá2008-04-23info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/214210.4025/actasciagron.v25i1.2142Acta Scientiarum. Agronomy; Vol 25 No 1 (2003); 1-5Acta Scientiarum. Agronomy; v. 25 n. 1 (2003); 1-51807-86211679-9275reponame:Acta Scientiarum. Agronomy (Online)instname:Universidade Estadual de Maringá (UEM)instacron:UEMporhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/2142/1623Tardin, Flávio DessuneAmaral Júnior, Antonio Teixeira doPereira, Messias GonzagaVidigal, Maria Celeste GonçalvesDaher, Rogério FigueiredoScapim, Carlos Albertoinfo:eu-repo/semantics/openAccess2022-11-23T18:37:43Zoai:periodicos.uem.br/ojs:article/2142Revistahttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgronPUBhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/oaiactaagron@uem.br||actaagron@uem.br|| edamasio@uem.br1807-86211679-9275opendoar:2022-11-23T18:37:43Acta Scientiarum. Agronomy (Online) - Universidade Estadual de Maringá (UEM)false |
dc.title.none.fl_str_mv |
Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142 Variabilidade genética em alface (Lactuca sativa L.) e determinação do número ótimo de marcas RAPD para estudos de diversidade molecular - DOI: 10.4025/actasciagron.v25i1.2142 |
title |
Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142 |
spellingShingle |
Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142 Tardin, Flávio Dessune Lactuca sativa diversidade genética marcadores RAPD 5.00.00.00-4 Ciências Agrárias |
title_short |
Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142 |
title_full |
Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142 |
title_fullStr |
Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142 |
title_full_unstemmed |
Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142 |
title_sort |
Genetic diversity and determination of the optimum number of RAPD markers in lettuce (Lactuca sativa L.) - DOI: 10.4025/actasciagron.v25i1.2142 |
author |
Tardin, Flávio Dessune |
author_facet |
Tardin, Flávio Dessune Amaral Júnior, Antonio Teixeira do Pereira, Messias Gonzaga Vidigal, Maria Celeste Gonçalves Daher, Rogério Figueiredo Scapim, Carlos Alberto |
author_role |
author |
author2 |
Amaral Júnior, Antonio Teixeira do Pereira, Messias Gonzaga Vidigal, Maria Celeste Gonçalves Daher, Rogério Figueiredo Scapim, Carlos Alberto |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Tardin, Flávio Dessune Amaral Júnior, Antonio Teixeira do Pereira, Messias Gonzaga Vidigal, Maria Celeste Gonçalves Daher, Rogério Figueiredo Scapim, Carlos Alberto |
dc.subject.por.fl_str_mv |
Lactuca sativa diversidade genética marcadores RAPD 5.00.00.00-4 Ciências Agrárias |
topic |
Lactuca sativa diversidade genética marcadores RAPD 5.00.00.00-4 Ciências Agrárias |
description |
Twenty lettuce accessions from the UENF Germplasm Collection were assessed for genetic diversity using RAPD markers. Multivariate statistical techniques were used, such as grouping analyses, using the Tocher and Single Linkage methods. Analysis of 55 polymorphic markers, obtained with 25 primers, showed that there was sufficient variability in the material studied to be exploited in future breeding programs. The ‘BGH 4060’ and ‘Grand Rapids’ accessions were the most dissimilar, while ‘BGH 4325’ and ‘BGH 4326' were the most similar. There was high agreement between ecogeographic origin and molecular similarity. It was further found by the stress statistic (Kruskal, 1964) and by the correlation between number of markers and increase in ideal formation of groups that 50 polymorphic markers is the optimum number for genetic diversity study in the assessed accessions. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-04-23 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/2142 10.4025/actasciagron.v25i1.2142 |
url |
http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/2142 |
identifier_str_mv |
10.4025/actasciagron.v25i1.2142 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.relation.none.fl_str_mv |
http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/2142/1623 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Estadual de Maringá |
publisher.none.fl_str_mv |
Universidade Estadual de Maringá |
dc.source.none.fl_str_mv |
Acta Scientiarum. Agronomy; Vol 25 No 1 (2003); 1-5 Acta Scientiarum. Agronomy; v. 25 n. 1 (2003); 1-5 1807-8621 1679-9275 reponame:Acta Scientiarum. Agronomy (Online) instname:Universidade Estadual de Maringá (UEM) instacron:UEM |
instname_str |
Universidade Estadual de Maringá (UEM) |
instacron_str |
UEM |
institution |
UEM |
reponame_str |
Acta Scientiarum. Agronomy (Online) |
collection |
Acta Scientiarum. Agronomy (Online) |
repository.name.fl_str_mv |
Acta Scientiarum. Agronomy (Online) - Universidade Estadual de Maringá (UEM) |
repository.mail.fl_str_mv |
actaagron@uem.br||actaagron@uem.br|| edamasio@uem.br |
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1799305905154555904 |