Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)

Detalhes bibliográficos
Autor(a) principal: Waminal, Yancy Ogdamin
Data de Publicação: 2022
Outros Autores: Tubalinal, Gabriel Alexis San Pedro, Mingala, Claro Niegos
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Acta Scientiarum. Animal Sciences (Online)
Texto Completo: https://periodicos.uem.br/ojs/index.php/ActaSciAnimSci/article/view/56368
Resumo: The study characterized the lactoferrin (Lf) mRNA gene in different goat breeds in the Philippines and determined its association with subclinical mastitis (SCM). The study involved collection of milk at second week of lactation (n=75) and blood samples (n=5) to obtain extracted RNA and using cDNA to amplify Lf gene through polymerase chain reaction. The nucleotide and amino acid sequences were determined and used as reference in the evaluation of phylogenetic relationship. Amplified products were utilized for RFLP analysis before determining the association of the gene with SCM. Results of the study demonstrated that Lf gene in goats registered a molecular weight of 2135. Nucleotide and amino acid sequence of Lf gene revealed high similarity (99%) in Saanen, Anglo-Nubian and Philippine native goats with that of Capra hircus (U53857) Lf gene submitted to GenBank. Phylogenetic studies showed that Lf gene of Anglo-Nubian, Saanen and Native goats clade together with Lf gene of C. hircus (U53857). Three genotypes in goats were documented using the restriction enzymes AluI and HaeIII. Based on the Statistical analysis, association (comp 5.65, p = 0.0308) has been established between the Lf genes of goats with genotype BB to SCM using HaeIII restriction enzyme.
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spelling Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)Anglo-Nubian; Lf gene; Philippine native goat; Saanen.Anglo-Nubian; Lf gene; Philippine native goat; Saanen.The study characterized the lactoferrin (Lf) mRNA gene in different goat breeds in the Philippines and determined its association with subclinical mastitis (SCM). The study involved collection of milk at second week of lactation (n=75) and blood samples (n=5) to obtain extracted RNA and using cDNA to amplify Lf gene through polymerase chain reaction. The nucleotide and amino acid sequences were determined and used as reference in the evaluation of phylogenetic relationship. Amplified products were utilized for RFLP analysis before determining the association of the gene with SCM. Results of the study demonstrated that Lf gene in goats registered a molecular weight of 2135. Nucleotide and amino acid sequence of Lf gene revealed high similarity (99%) in Saanen, Anglo-Nubian and Philippine native goats with that of Capra hircus (U53857) Lf gene submitted to GenBank. Phylogenetic studies showed that Lf gene of Anglo-Nubian, Saanen and Native goats clade together with Lf gene of C. hircus (U53857). Three genotypes in goats were documented using the restriction enzymes AluI and HaeIII. Based on the Statistical analysis, association (comp 5.65, p = 0.0308) has been established between the Lf genes of goats with genotype BB to SCM using HaeIII restriction enzyme.The study characterized the lactoferrin (Lf) mRNA gene in different goat breeds in the Philippines and determined its association with subclinical mastitis (SCM). The study involved collection of milk at second week of lactation (n=75) and blood samples (n=5) to obtain extracted RNA and using cDNA to amplify Lf gene through polymerase chain reaction. The nucleotide and amino acid sequences were determined and used as reference in the evaluation of phylogenetic relationship. Amplified products were utilized for RFLP analysis before determining the association of the gene with SCM. Results of the study demonstrated that Lf gene in goats registered a molecular weight of 2135. Nucleotide and amino acid sequence of Lf gene revealed high similarity (99%) in Saanen, Anglo-Nubian and Philippine native goats with that of Capra hircus (U53857) Lf gene submitted to GenBank. Phylogenetic studies showed that Lf gene of Anglo-Nubian, Saanen and Native goats clade together with Lf gene of C. hircus (U53857). Three genotypes in goats were documented using the restriction enzymes AluI and HaeIII. Based on the Statistical analysis, association (comp 5.65, p = 0.0308) has been established between the Lf genes of goats with genotype BB to SCM using HaeIII restriction enzyme.Editora da Universidade Estadual de Maringá2022-07-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://periodicos.uem.br/ojs/index.php/ActaSciAnimSci/article/view/5636810.4025/actascianimsci.v44i1.56368Acta Scientiarum. Animal Sciences; Vol 44 (2022): Publicação contínua; e56368Acta Scientiarum. Animal Sciences; v. 44 (2022): Publicação contínua; e563681807-86721806-2636reponame:Acta Scientiarum. Animal Sciences (Online)instname:Universidade Estadual de Maringá (UEM)instacron:UEMenghttps://periodicos.uem.br/ojs/index.php/ActaSciAnimSci/article/view/56368/751375154514Copyright (c) 2022 Acta Scientiarum. Animal Scienceshttp://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessWaminal, Yancy Ogdamin Tubalinal, Gabriel Alexis San Pedro Mingala, Claro Niegos 2022-07-28T16:30:02Zoai:periodicos.uem.br/ojs:article/56368Revistahttp://www.periodicos.uem.br/ojs/index.php/ActaSciAnimSciPUBhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAnimSci/oaiactaanim@uem.br||actaanim@uem.br|| rev.acta@gmail.com1807-86721806-2636opendoar:2022-07-28T16:30:02Acta Scientiarum. Animal Sciences (Online) - Universidade Estadual de Maringá (UEM)false
dc.title.none.fl_str_mv Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)
Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)
title Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)
spellingShingle Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)
Waminal, Yancy Ogdamin
Anglo-Nubian; Lf gene; Philippine native goat; Saanen.
Anglo-Nubian; Lf gene; Philippine native goat; Saanen.
title_short Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)
title_full Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)
title_fullStr Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)
title_full_unstemmed Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)
title_sort Molecular characterization and association of lactoferrin gene to subclinical mastitis in goats (Capra hircus)
author Waminal, Yancy Ogdamin
author_facet Waminal, Yancy Ogdamin
Tubalinal, Gabriel Alexis San Pedro
Mingala, Claro Niegos
author_role author
author2 Tubalinal, Gabriel Alexis San Pedro
Mingala, Claro Niegos
author2_role author
author
dc.contributor.author.fl_str_mv Waminal, Yancy Ogdamin
Tubalinal, Gabriel Alexis San Pedro
Mingala, Claro Niegos
dc.subject.por.fl_str_mv Anglo-Nubian; Lf gene; Philippine native goat; Saanen.
Anglo-Nubian; Lf gene; Philippine native goat; Saanen.
topic Anglo-Nubian; Lf gene; Philippine native goat; Saanen.
Anglo-Nubian; Lf gene; Philippine native goat; Saanen.
description The study characterized the lactoferrin (Lf) mRNA gene in different goat breeds in the Philippines and determined its association with subclinical mastitis (SCM). The study involved collection of milk at second week of lactation (n=75) and blood samples (n=5) to obtain extracted RNA and using cDNA to amplify Lf gene through polymerase chain reaction. The nucleotide and amino acid sequences were determined and used as reference in the evaluation of phylogenetic relationship. Amplified products were utilized for RFLP analysis before determining the association of the gene with SCM. Results of the study demonstrated that Lf gene in goats registered a molecular weight of 2135. Nucleotide and amino acid sequence of Lf gene revealed high similarity (99%) in Saanen, Anglo-Nubian and Philippine native goats with that of Capra hircus (U53857) Lf gene submitted to GenBank. Phylogenetic studies showed that Lf gene of Anglo-Nubian, Saanen and Native goats clade together with Lf gene of C. hircus (U53857). Three genotypes in goats were documented using the restriction enzymes AluI and HaeIII. Based on the Statistical analysis, association (comp 5.65, p = 0.0308) has been established between the Lf genes of goats with genotype BB to SCM using HaeIII restriction enzyme.
publishDate 2022
dc.date.none.fl_str_mv 2022-07-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://periodicos.uem.br/ojs/index.php/ActaSciAnimSci/article/view/56368
10.4025/actascianimsci.v44i1.56368
url https://periodicos.uem.br/ojs/index.php/ActaSciAnimSci/article/view/56368
identifier_str_mv 10.4025/actascianimsci.v44i1.56368
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://periodicos.uem.br/ojs/index.php/ActaSciAnimSci/article/view/56368/751375154514
dc.rights.driver.fl_str_mv Copyright (c) 2022 Acta Scientiarum. Animal Sciences
http://creativecommons.org/licenses/by/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2022 Acta Scientiarum. Animal Sciences
http://creativecommons.org/licenses/by/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Editora da Universidade Estadual de Maringá
publisher.none.fl_str_mv Editora da Universidade Estadual de Maringá
dc.source.none.fl_str_mv Acta Scientiarum. Animal Sciences; Vol 44 (2022): Publicação contínua; e56368
Acta Scientiarum. Animal Sciences; v. 44 (2022): Publicação contínua; e56368
1807-8672
1806-2636
reponame:Acta Scientiarum. Animal Sciences (Online)
instname:Universidade Estadual de Maringá (UEM)
instacron:UEM
instname_str Universidade Estadual de Maringá (UEM)
instacron_str UEM
institution UEM
reponame_str Acta Scientiarum. Animal Sciences (Online)
collection Acta Scientiarum. Animal Sciences (Online)
repository.name.fl_str_mv Acta Scientiarum. Animal Sciences (Online) - Universidade Estadual de Maringá (UEM)
repository.mail.fl_str_mv actaanim@uem.br||actaanim@uem.br|| rev.acta@gmail.com
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