Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos
Autor(a) principal: | |
---|---|
Data de Publicação: | 2016 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Biblioteca Digital de Teses e Dissertações da UERJ |
Texto Completo: | http://www.bdtd.uerj.br/handle/1/14447 |
Resumo: | Stenotrophomonas maltophilia is a non-fermentative Gram negative bacillus frequent in respiratory infections, especially in patients assisted in intensive care units (ICU). It is also an important pulmonary pathogen in cystic fibrosis patients (CF). It is often multidrug resistant exhibiting resistance to a broad antimicrobial spectrum. Fluoroquinolone and trimethoprim/sulfamethoxazole (TMP-SXT) are drugs of choice for the treatment of infections caused by S. maltophilia but increasing resistance has been reported. The aim of the study was to evaluate the susceptibility and the molecular mechanisms responsible for antimicrobial resistance in S. maltophilia strains obtained from CF patients assisted in two CF reference centers and hospitalized non-cystic patients (NCF) assisted in a teaching hospital in Rio de Janeiro, Brazil. A total of 226 isolates from different clinical specimens were identified using conventional methods and evaluated by the Kirby-Bauer disk diffusion method (DD) to levofloxacin, minocycline and trimethoprim/sulfamethoxazole (TMP-SXT). The minimal inhibitory concentration (MIC) of ciprofloxacin (CIP), ceftazidime (CAZ) and TMP-SXT was determined by microdilution method according to Clinical and Laboratory Standard Institute. Polymerase Chain Reaction (PCR) analysis was performed to evaluate the expression of the sul1 (190 samples; 54 CF and 138 NCF) and qnr (A. B, S) (39 samples resistant to CIP). The samples were obtained from different specimens from January 2010 to October 2014. Fifty two samples (23%) were obtained from CF patients and most of all isolated from sputum (92.3%). The majority of 174 samples (n=77%) obtained from NCF patients were isolated from secretion/aspirate tracheal (51.5%), sputum (27%) and blood (12.1%). By DD test all samples (n=52) of CF patients were susceptible to all evaluated antimicrobials. Only 8 (4.6%) S. maltophilia strains isolated from NCF patients were resistant to TMP-SXT and levofloxacin. To determine the MIC we selected samples that showed resistance to any antimicrobial in the DD test; samples isolated from blood and one isolate for each CF patients, totaling 55 samples. Using MIC determination, CIP was the antimicrobial with the highest percentage (70,9%) of resistant strains (70,6% from CF and 76,4% from NCF). The sul1 gene was detected in one sample from NCF patient with high MIC for TMP-SXT (32µg/mL). The qnr genes (A, B and S) were not identified in this study. Most strains of S. maltophilia was isolated from patients NCF. The TMP-SXT is still the best drug of choice for the treatment of infections caused by this species. However, continuous monitoring of resistance to important antibiotics and the use of molecular methods are warranted to provide appropriate antimicrobial regimens for treating S. maltophilia infections. |
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Marques, Elizabeth de Andradehttp://lattes.cnpq.br/5959485578597640Queiroz, Mara Lucia Pennahttp://lattes.cnpq.br/1980792659825205Assef, Ana Paula D'alincourt Carvalhohttp://lattes.cnpq.br/5196425284967145Carvalho, Karyne Rangelhttp://lattes.cnpq.br/4204191981666483http://lattes.cnpq.br/0200993487752372Braga, Fabrina Seger2021-01-07T15:16:50Z2016-11-042016-03-11BRAGA, Fabrina Seger. Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos. 2016. 88 f. Dissertação (Mestrado em Microbiologia Médica Humana) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2016.http://www.bdtd.uerj.br/handle/1/14447Stenotrophomonas maltophilia is a non-fermentative Gram negative bacillus frequent in respiratory infections, especially in patients assisted in intensive care units (ICU). It is also an important pulmonary pathogen in cystic fibrosis patients (CF). It is often multidrug resistant exhibiting resistance to a broad antimicrobial spectrum. Fluoroquinolone and trimethoprim/sulfamethoxazole (TMP-SXT) are drugs of choice for the treatment of infections caused by S. maltophilia but increasing resistance has been reported. The aim of the study was to evaluate the susceptibility and the molecular mechanisms responsible for antimicrobial resistance in S. maltophilia strains obtained from CF patients assisted in two CF reference centers and hospitalized non-cystic patients (NCF) assisted in a teaching hospital in Rio de Janeiro, Brazil. A total of 226 isolates from different clinical specimens were identified using conventional methods and evaluated by the Kirby-Bauer disk diffusion method (DD) to levofloxacin, minocycline and trimethoprim/sulfamethoxazole (TMP-SXT). The minimal inhibitory concentration (MIC) of ciprofloxacin (CIP), ceftazidime (CAZ) and TMP-SXT was determined by microdilution method according to Clinical and Laboratory Standard Institute. Polymerase Chain Reaction (PCR) analysis was performed to evaluate the expression of the sul1 (190 samples; 54 CF and 138 NCF) and qnr (A. B, S) (39 samples resistant to CIP). The samples were obtained from different specimens from January 2010 to October 2014. Fifty two samples (23%) were obtained from CF patients and most of all isolated from sputum (92.3%). The majority of 174 samples (n=77%) obtained from NCF patients were isolated from secretion/aspirate tracheal (51.5%), sputum (27%) and blood (12.1%). By DD test all samples (n=52) of CF patients were susceptible to all evaluated antimicrobials. Only 8 (4.6%) S. maltophilia strains isolated from NCF patients were resistant to TMP-SXT and levofloxacin. To determine the MIC we selected samples that showed resistance to any antimicrobial in the DD test; samples isolated from blood and one isolate for each CF patients, totaling 55 samples. Using MIC determination, CIP was the antimicrobial with the highest percentage (70,9%) of resistant strains (70,6% from CF and 76,4% from NCF). The sul1 gene was detected in one sample from NCF patient with high MIC for TMP-SXT (32µg/mL). The qnr genes (A, B and S) were not identified in this study. Most strains of S. maltophilia was isolated from patients NCF. The TMP-SXT is still the best drug of choice for the treatment of infections caused by this species. However, continuous monitoring of resistance to important antibiotics and the use of molecular methods are warranted to provide appropriate antimicrobial regimens for treating S. maltophilia infections.Stenotrophomonas maltophilia é um Bastonete Gram negativo Não Fermentador da Glicose (BGNNF), frequente em infecções respiratórias especialmente em pacientes assistidos em centros de terapia intensiva (CTI). Também se destaca como um patógeno emergente em pacientes com fibrose cística (FC). É frequentemente multirresistente, exibindo resistência a um amplo espectro de antimicrobianos. Fluoroquinolonas e trimetoprima/sulfametoxazol (SXT) são os antimicrobianos de escolha para o tratamento de infecções causadas por S. maltophilia. Entretanto, o aumento na prevalência de cepas resistentes tem sido relatado. O objetivo deste estudo foi avaliar o perfil de sensibilidade e os mecanismos moleculares responsáveis pela resistência aos antimicrobianos em S. maltophilia obtidas de pacientes com FC e pacientes sem fibrose cística (NFC) assistidos em dois centros de referência (FC) e em um hospital universitário (NFC) no Rio de Janeiro. Foram analisadas 226 amostras pelo método de difusão em ágar (DD) para levofloxacina, minociclina e SXT e determinada a concentração inibitória mínima (CIM) por microdiluição em caldo para ciprofloxacina (CIP), ceftazidima (CAZ) e SXT, conforme recomendações do Clinical and Laboratory Standart Institute. O método molecular de Reação em cadeia da Polimerase (PCR) foi utilizado para a pesquisa dos genes sul1 em 190 amostras (52 FC e 138 NFC) e qnr (A, B e S) em 39 amostras não sensíveis (resistente+intermediário) a CIP (24 FC e 15 NFC). As amostras foram obtidas de diferentes espécimes clínicos no período de janeiro de 2010 a outubro de 2014. Cinquenta de duas amostras (23%) foram obtidas de pacientes FC e a maioria isolada de escarro (92,3%). Em pacientes NFC foram isoladas 174 amostras (n=77%) sendo a maioria de secreção/aspirado traqueal (51,5%) e escarro (27%). Pelo teste de DD todas as amostras (n=52) de pacientes FC foram sensíveis aos três antimicrobianos avaliados. Apenas 8 amostras (4,6%) de pacientes NFC foram não sensíveis (6 resistentes e 2 intermediárias) a SXT e a levofloxacina. Para a determinação da CIM foram selecionadas 55 amostras. CIP foi o antimicrobiano com maior percentual de amostras resistentes (70,9%; 70,6% em FC e 76,4% em NFC). O gene sul1 foi identificado em uma amostra de paciente NFC cuja CIM para SXT foi de 32µg/mL. Os genes qnr (A, B e S) não foram identificados no presente estudo. A maioria das amostras de S. maltophilia foi isolada de pacientes NFC.O antimicrobiano SXT ainda é a melhor opção terapêutica para o tratamento de infecções causadas por esta espécie. Contudo, a constante monitorização através de testes de sensibilidade aos antimicrobianos e métodos moleculares se faz necessária.Submitted by Boris Flegr (boris@uerj.br) on 2021-01-07T15:16:50Z No. of bitstreams: 1 Fabrina Seger Braga Dissertacao completa.pdf: 983061 bytes, checksum: 19999a6ef0d9fb87e460323e43818e56 (MD5)Made available in DSpace on 2021-01-07T15:16:50Z (GMT). No. of bitstreams: 1 Fabrina Seger Braga Dissertacao completa.pdf: 983061 bytes, checksum: 19999a6ef0d9fb87e460323e43818e56 (MD5) Previous issue date: 2016-03-11Coordenação de Aperfeiçoamento de Pessoal de Nível Superiorapplication/pdfporUniversidade do Estado do Rio de JaneiroPrograma de Pós-Graduação em MicrobiologiaUERJBRCentro Biomédico::Faculdade de Ciências MédicasStenotrophomonas maltophiliaAntimicrobial resistanceCystic fibrosisStenotrophomonas maltophiliaResistência a antimicrobianosFibrose císticaFibrose císticaStenotrophomonas maltophiliaResistência a antimicrobianosCNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIAStenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianosStenotrophomonas maltophilia isolated from cystic fibrosis and non-cystic fbrosis patients: molecular characterization of antimicrobial resistanceinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UERJinstname:Universidade do Estado do Rio de Janeiro (UERJ)instacron:UERJORIGINALFabrina Seger Braga Dissertacao completa.pdfapplication/pdf983061http://www.bdtd.uerj.br/bitstream/1/14447/1/Fabrina+Seger+Braga+Dissertacao+completa.pdf19999a6ef0d9fb87e460323e43818e56MD511/144472024-02-26 19:54:39.715oai:www.bdtd.uerj.br:1/14447Biblioteca Digital de Teses e Dissertaçõeshttp://www.bdtd.uerj.br/PUBhttps://www.bdtd.uerj.br:8443/oai/requestbdtd.suporte@uerj.bropendoar:29032024-02-26T22:54:39Biblioteca Digital de Teses e Dissertações da UERJ - Universidade do Estado do Rio de Janeiro (UERJ)false |
dc.title.por.fl_str_mv |
Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos |
dc.title.alternative.eng.fl_str_mv |
Stenotrophomonas maltophilia isolated from cystic fibrosis and non-cystic fbrosis patients: molecular characterization of antimicrobial resistance |
title |
Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos |
spellingShingle |
Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos Braga, Fabrina Seger Stenotrophomonas maltophilia Antimicrobial resistance Cystic fibrosis Stenotrophomonas maltophilia Resistência a antimicrobianos Fibrose cística Fibrose cística Stenotrophomonas maltophilia Resistência a antimicrobianos CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA |
title_short |
Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos |
title_full |
Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos |
title_fullStr |
Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos |
title_full_unstemmed |
Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos |
title_sort |
Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos |
author |
Braga, Fabrina Seger |
author_facet |
Braga, Fabrina Seger |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Marques, Elizabeth de Andrade |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/5959485578597640 |
dc.contributor.referee1.fl_str_mv |
Queiroz, Mara Lucia Penna |
dc.contributor.referee1Lattes.fl_str_mv |
http://lattes.cnpq.br/1980792659825205 |
dc.contributor.referee2.fl_str_mv |
Assef, Ana Paula D'alincourt Carvalho |
dc.contributor.referee2Lattes.fl_str_mv |
http://lattes.cnpq.br/5196425284967145 |
dc.contributor.referee3.fl_str_mv |
Carvalho, Karyne Rangel |
dc.contributor.referee3Lattes.fl_str_mv |
http://lattes.cnpq.br/4204191981666483 |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/0200993487752372 |
dc.contributor.author.fl_str_mv |
Braga, Fabrina Seger |
contributor_str_mv |
Marques, Elizabeth de Andrade Queiroz, Mara Lucia Penna Assef, Ana Paula D'alincourt Carvalho Carvalho, Karyne Rangel |
dc.subject.eng.fl_str_mv |
Stenotrophomonas maltophilia Antimicrobial resistance Cystic fibrosis |
topic |
Stenotrophomonas maltophilia Antimicrobial resistance Cystic fibrosis Stenotrophomonas maltophilia Resistência a antimicrobianos Fibrose cística Fibrose cística Stenotrophomonas maltophilia Resistência a antimicrobianos CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA |
dc.subject.por.fl_str_mv |
Stenotrophomonas maltophilia Resistência a antimicrobianos Fibrose cística Fibrose cística Stenotrophomonas maltophilia Resistência a antimicrobianos |
dc.subject.cnpq.fl_str_mv |
CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA |
description |
Stenotrophomonas maltophilia is a non-fermentative Gram negative bacillus frequent in respiratory infections, especially in patients assisted in intensive care units (ICU). It is also an important pulmonary pathogen in cystic fibrosis patients (CF). It is often multidrug resistant exhibiting resistance to a broad antimicrobial spectrum. Fluoroquinolone and trimethoprim/sulfamethoxazole (TMP-SXT) are drugs of choice for the treatment of infections caused by S. maltophilia but increasing resistance has been reported. The aim of the study was to evaluate the susceptibility and the molecular mechanisms responsible for antimicrobial resistance in S. maltophilia strains obtained from CF patients assisted in two CF reference centers and hospitalized non-cystic patients (NCF) assisted in a teaching hospital in Rio de Janeiro, Brazil. A total of 226 isolates from different clinical specimens were identified using conventional methods and evaluated by the Kirby-Bauer disk diffusion method (DD) to levofloxacin, minocycline and trimethoprim/sulfamethoxazole (TMP-SXT). The minimal inhibitory concentration (MIC) of ciprofloxacin (CIP), ceftazidime (CAZ) and TMP-SXT was determined by microdilution method according to Clinical and Laboratory Standard Institute. Polymerase Chain Reaction (PCR) analysis was performed to evaluate the expression of the sul1 (190 samples; 54 CF and 138 NCF) and qnr (A. B, S) (39 samples resistant to CIP). The samples were obtained from different specimens from January 2010 to October 2014. Fifty two samples (23%) were obtained from CF patients and most of all isolated from sputum (92.3%). The majority of 174 samples (n=77%) obtained from NCF patients were isolated from secretion/aspirate tracheal (51.5%), sputum (27%) and blood (12.1%). By DD test all samples (n=52) of CF patients were susceptible to all evaluated antimicrobials. Only 8 (4.6%) S. maltophilia strains isolated from NCF patients were resistant to TMP-SXT and levofloxacin. To determine the MIC we selected samples that showed resistance to any antimicrobial in the DD test; samples isolated from blood and one isolate for each CF patients, totaling 55 samples. Using MIC determination, CIP was the antimicrobial with the highest percentage (70,9%) of resistant strains (70,6% from CF and 76,4% from NCF). The sul1 gene was detected in one sample from NCF patient with high MIC for TMP-SXT (32µg/mL). The qnr genes (A, B and S) were not identified in this study. Most strains of S. maltophilia was isolated from patients NCF. The TMP-SXT is still the best drug of choice for the treatment of infections caused by this species. However, continuous monitoring of resistance to important antibiotics and the use of molecular methods are warranted to provide appropriate antimicrobial regimens for treating S. maltophilia infections. |
publishDate |
2016 |
dc.date.available.fl_str_mv |
2016-11-04 |
dc.date.issued.fl_str_mv |
2016-03-11 |
dc.date.accessioned.fl_str_mv |
2021-01-07T15:16:50Z |
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info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
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masterThesis |
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publishedVersion |
dc.identifier.citation.fl_str_mv |
BRAGA, Fabrina Seger. Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos. 2016. 88 f. Dissertação (Mestrado em Microbiologia Médica Humana) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2016. |
dc.identifier.uri.fl_str_mv |
http://www.bdtd.uerj.br/handle/1/14447 |
identifier_str_mv |
BRAGA, Fabrina Seger. Stenotrophomonas maltophilia isoladas de pacientes com fibrose cística e sem fibrose cística: caracterização molecular da resistência a antimicrobianos. 2016. 88 f. Dissertação (Mestrado em Microbiologia Médica Humana) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2016. |
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http://www.bdtd.uerj.br/handle/1/14447 |
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Universidade do Estado do Rio de Janeiro |
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Programa de Pós-Graduação em Microbiologia |
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UERJ |
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BR |
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Centro Biomédico::Faculdade de Ciências Médicas |
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Universidade do Estado do Rio de Janeiro |
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