Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura

Detalhes bibliográficos
Autor(a) principal: Lima, Marcos Paulo Galdino de
Data de Publicação: 2014
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UERJ
Texto Completo: http://www.bdtd.uerj.br/handle/1/7698
Resumo: The discrimination of phases that are practically undistinguishable to the optical microscope of reflected light or to the scanning electron microscope (SEM) is one of the classical problems in ore microscopy. With the aim of solving this problem it has been recently used the technique of co-located microscopy that consists in the junction of two microscopy modalities, optical microscopy and scanning electron microscope. The aim of the technique is to provide an image of the multimodal microscopy, becoming possible the identification, in mineral samples, of phases that wouldn t be distinguished by the use of one modality only, overcoming the individual limitations of the two systems. The method of register available so far in literature to the fusion of optical microscopy and scanning electron microscope images is a hard-working procedure and extremely dependent on the operator interaction, once it involves the system calibration with a standard mesh in each routine of images acquisition. Due to this reason the current technique is not practical. This piece of work proposes a methodology in order to automate the process of images register in optical microscopy and scanning electron microscopy in a way to improve and simplify the co-located microscopy technique. The proposed method may be divided in two procedures: acquisition of transformation and register of the images with the use of this transformation. The acquisition of transformation involves, first, the pre-processing of pairs in a way of performing a crude register among the images of each pair. Then, homologous points are achieved in the optical and in SEM images. In order to this, it has been used two methods, the first one was developed based in algorithm SIFT and the second was defined from the sweeping of the highest of coefficient correlation. In the following step it is calculated the transformation. Two different approaches were used: the local weighted mean (LWM) and the weighted least squares with orthogonal polynomials (MQPPO). The LWM receives as entrance what we call pseudo-counterparts, points that are distributed in a regular way in the reference image, and that reveal, in the image to be registered, the relative local dislocation among the images. Those pseudo-counterparts may be obtained by SIFT or by the method of correlation coefficient. On the other side, the MQPPO receives a group of points with natural distribution. The analysis of the images registration obtained employed as a metric the value of correlation among the obtained images. It was noticed that with the use of the proposed variants SIFT-LWM and SIF-Correlation were obtained slightly higher results than the ones from the method with standard mesh and LWM. Thus, the proposal, besides reducing drastically the operator intervention, still enabled more exact results. On the other side, the method based in the transformation provided by the minimum square pondered with orthogonal polynomial showed lower results than to the ones produced by the method that used standard mesh
id UERJ_b641d6769bf4814753fdb3c24079c60c
oai_identifier_str oai:www.bdtd.uerj.br:1/7698
network_acronym_str UERJ
network_name_str Biblioteca Digital de Teses e Dissertações da UERJ
repository_id_str 2903
spelling Mota, Guilherme Lucio Abelhahttp://lattes.cnpq.br/4657870977403568Gomes, Otávio da Fonseca Martinshttp://lattes.cnpq.br/6645772503347843Mello, Maria Herminia de Paula Leitehttp://lattes.cnpq.br/4468191018994448Paciornik, Sidneihttp://lattes.cnpq.br/4692086634018379Costa, Gilson Alexandre Ostwald Pedro dahttp://lattes.cnpq.br/1321820478036793http://lattes.cnpq.br/4504024306093053Lima, Marcos Paulo Galdino de2021-01-05T17:54:16Z2014-07-242014-05-07LIMA, Marcos Paulo Galdino de. Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura. 2014. 76 f. Dissertação (Mestrado em Modelagem matemático-estatístico-computacional) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2014.http://www.bdtd.uerj.br/handle/1/7698The discrimination of phases that are practically undistinguishable to the optical microscope of reflected light or to the scanning electron microscope (SEM) is one of the classical problems in ore microscopy. With the aim of solving this problem it has been recently used the technique of co-located microscopy that consists in the junction of two microscopy modalities, optical microscopy and scanning electron microscope. The aim of the technique is to provide an image of the multimodal microscopy, becoming possible the identification, in mineral samples, of phases that wouldn t be distinguished by the use of one modality only, overcoming the individual limitations of the two systems. The method of register available so far in literature to the fusion of optical microscopy and scanning electron microscope images is a hard-working procedure and extremely dependent on the operator interaction, once it involves the system calibration with a standard mesh in each routine of images acquisition. Due to this reason the current technique is not practical. This piece of work proposes a methodology in order to automate the process of images register in optical microscopy and scanning electron microscopy in a way to improve and simplify the co-located microscopy technique. The proposed method may be divided in two procedures: acquisition of transformation and register of the images with the use of this transformation. The acquisition of transformation involves, first, the pre-processing of pairs in a way of performing a crude register among the images of each pair. Then, homologous points are achieved in the optical and in SEM images. In order to this, it has been used two methods, the first one was developed based in algorithm SIFT and the second was defined from the sweeping of the highest of coefficient correlation. In the following step it is calculated the transformation. Two different approaches were used: the local weighted mean (LWM) and the weighted least squares with orthogonal polynomials (MQPPO). The LWM receives as entrance what we call pseudo-counterparts, points that are distributed in a regular way in the reference image, and that reveal, in the image to be registered, the relative local dislocation among the images. Those pseudo-counterparts may be obtained by SIFT or by the method of correlation coefficient. On the other side, the MQPPO receives a group of points with natural distribution. The analysis of the images registration obtained employed as a metric the value of correlation among the obtained images. It was noticed that with the use of the proposed variants SIFT-LWM and SIF-Correlation were obtained slightly higher results than the ones from the method with standard mesh and LWM. Thus, the proposal, besides reducing drastically the operator intervention, still enabled more exact results. On the other side, the method based in the transformation provided by the minimum square pondered with orthogonal polynomial showed lower results than to the ones produced by the method that used standard meshA discriminação de fases que são praticamente indistinguíveis ao microscópio ótico de luz refletida ou ao microscópio eletrônico de varredura (MEV) é um dos problemas clássicos da microscopia de minérios. Com o objetivo de resolver este problema vem sendo recentemente empregada a técnica de microscopia colocalizada, que consiste na junção de duas modalidades de microscopia, microscopia ótica e microscopia eletrônica de varredura. O objetivo da técnica é fornecer uma imagem de microscopia multimodal, tornando possível a identificação, em amostras de minerais, de fases que não seriam distinguíveis com o uso de uma única modalidade, superando assim as limitações individuais dos dois sistemas. O método de registro até então disponível na literatura para a fusão das imagens de microscopia ótica e de microscopia eletrônica de varredura é um procedimento trabalhoso e extremamente dependente da interação do operador, uma vez que envolve a calibração do sistema com uma malha padrão a cada rotina de aquisição de imagens. Por esse motivo a técnica existente não é prática. Este trabalho propõe uma metodologia para automatizar o processo de registro de imagens de microscopia ótica e de microscopia eletrônica de varredura de maneira a aperfeiçoar e simplificar o uso da técnica de microscopia colocalizada. O método proposto pode ser subdividido em dois procedimentos: obtenção da transformação e registro das imagens com uso desta transformação. A obtenção da transformação envolve, primeiramente, o pré-processamento dos pares de forma a executar um registro grosseiro entre as imagens de cada par. Em seguida, são obtidos pontos homólogos, nas imagens óticas e de MEV. Para tal, foram utilizados dois métodos, o primeiro desenvolvido com base no algoritmo SIFT e o segundo definido a partir da varredura pelo máximo valor do coeficiente de correlação. Na etapa seguinte é calculada a transformação. Foram empregadas duas abordagens distintas: a média ponderada local (LWM) e os mínimos quadrados ponderados com polinômios ortogonais (MQPPO). O LWM recebe como entradas os chamados pseudo-homólogos, pontos que são forçadamente distribuídos de forma regular na imagem de referência, e que revelam, na imagem a ser registrada, os deslocamentos locais relativos entre as imagens. Tais pseudo-homólogos podem ser obtidos tanto pelo SIFT como pelo método do coeficiente de correlação. Por outro lado, o MQPPO recebe um conjunto de pontos com a distribuição natural. A análise dos registro de imagens obtidos empregou como métrica o valor da correlação entre as imagens obtidas. Observou-se que com o uso das variantes propostas SIFT-LWM e SIFT-Correlação foram obtidos resultados ligeiramente superiores aos do método com a malha padrão e LWM. Assim, a proposta, além de reduzir drasticamente a intervenção do operador, ainda possibilitou resultados mais precisos. Por outro lado, o método baseado na transformação fornecida pelos mínimos quadrados ponderados com polinômios ortogonais mostrou resultados inferiores aos produzidos pelo método que faz uso da malha padrão.Submitted by Boris Flegr (boris@uerj.br) on 2021-01-05T17:54:16Z No. of bitstreams: 1 Marcos Paulo Galdino_completa.pdf: 7316511 bytes, checksum: 89416a457e2929021d401d9219cc0b88 (MD5)Made available in DSpace on 2021-01-05T17:54:16Z (GMT). No. of bitstreams: 1 Marcos Paulo Galdino_completa.pdf: 7316511 bytes, checksum: 89416a457e2929021d401d9219cc0b88 (MD5) Previous issue date: 2014-05-07Fundação de Amparo à Pesquisa do Estado do Rio de Janeiroapplication/pdfporUniversidade do Estado do Rio de JaneiroPrograma de Pós-Graduação em Ciências ComputacionaisUERJBRCentro de Tecnologia e Ciências::Instituto de Matemática e EstatísticaCharacterizationIron ore. Copper OreMultimodal MicroscopyImage Analysis. Co-located MicroscopyCaracterizaçãoMinério de FerroMinério de CobreMicroscopia MultimodalAnálise de ImagensMicroscopia ColocalizadaProcessamento de imagensMicroscopia eletrônica de varreduraVisão por computadorMinériosCNPQ::CIENCIAS EXATAS E DA TERRA::CIENCIA DA COMPUTACAO::METODOLOGIA E TECNICAS DA COMPUTACAOMicroscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varreduraMultimodal microscopy practice: automatic image registration for optical microscopy and scanning electron microscopyinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UERJinstname:Universidade do Estado do Rio de Janeiro (UERJ)instacron:UERJORIGINALMarcos Paulo Galdino_completa.pdfapplication/pdf7316511http://www.bdtd.uerj.br/bitstream/1/7698/1/Marcos+Paulo+Galdino_completa.pdf89416a457e2929021d401d9219cc0b88MD511/76982024-02-27 14:34:54.152oai:www.bdtd.uerj.br:1/7698Biblioteca Digital de Teses e Dissertaçõeshttp://www.bdtd.uerj.br/PUBhttps://www.bdtd.uerj.br:8443/oai/requestbdtd.suporte@uerj.bropendoar:29032024-02-27T17:34:54Biblioteca Digital de Teses e Dissertações da UERJ - Universidade do Estado do Rio de Janeiro (UERJ)false
dc.title.por.fl_str_mv Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura
dc.title.alternative.eng.fl_str_mv Multimodal microscopy practice: automatic image registration for optical microscopy and scanning electron microscopy
title Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura
spellingShingle Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura
Lima, Marcos Paulo Galdino de
Characterization
Iron ore. Copper Ore
Multimodal Microscopy
Image Analysis. Co-located Microscopy
Caracterização
Minério de Ferro
Minério de Cobre
Microscopia Multimodal
Análise de Imagens
Microscopia Colocalizada
Processamento de imagens
Microscopia eletrônica de varredura
Visão por computador
Minérios
CNPQ::CIENCIAS EXATAS E DA TERRA::CIENCIA DA COMPUTACAO::METODOLOGIA E TECNICAS DA COMPUTACAO
title_short Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura
title_full Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura
title_fullStr Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura
title_full_unstemmed Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura
title_sort Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura
author Lima, Marcos Paulo Galdino de
author_facet Lima, Marcos Paulo Galdino de
author_role author
dc.contributor.advisor1.fl_str_mv Mota, Guilherme Lucio Abelha
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/4657870977403568
dc.contributor.advisor-co1.fl_str_mv Gomes, Otávio da Fonseca Martins
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/6645772503347843
dc.contributor.referee1.fl_str_mv Mello, Maria Herminia de Paula Leite
dc.contributor.referee1Lattes.fl_str_mv http://lattes.cnpq.br/4468191018994448
dc.contributor.referee2.fl_str_mv Paciornik, Sidnei
dc.contributor.referee2Lattes.fl_str_mv http://lattes.cnpq.br/4692086634018379
dc.contributor.referee3.fl_str_mv Costa, Gilson Alexandre Ostwald Pedro da
dc.contributor.referee3Lattes.fl_str_mv http://lattes.cnpq.br/1321820478036793
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/4504024306093053
dc.contributor.author.fl_str_mv Lima, Marcos Paulo Galdino de
contributor_str_mv Mota, Guilherme Lucio Abelha
Gomes, Otávio da Fonseca Martins
Mello, Maria Herminia de Paula Leite
Paciornik, Sidnei
Costa, Gilson Alexandre Ostwald Pedro da
dc.subject.eng.fl_str_mv Characterization
Iron ore. Copper Ore
Multimodal Microscopy
Image Analysis. Co-located Microscopy
topic Characterization
Iron ore. Copper Ore
Multimodal Microscopy
Image Analysis. Co-located Microscopy
Caracterização
Minério de Ferro
Minério de Cobre
Microscopia Multimodal
Análise de Imagens
Microscopia Colocalizada
Processamento de imagens
Microscopia eletrônica de varredura
Visão por computador
Minérios
CNPQ::CIENCIAS EXATAS E DA TERRA::CIENCIA DA COMPUTACAO::METODOLOGIA E TECNICAS DA COMPUTACAO
dc.subject.por.fl_str_mv Caracterização
Minério de Ferro
Minério de Cobre
Microscopia Multimodal
Análise de Imagens
Microscopia Colocalizada
Processamento de imagens
Microscopia eletrônica de varredura
Visão por computador
Minérios
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS EXATAS E DA TERRA::CIENCIA DA COMPUTACAO::METODOLOGIA E TECNICAS DA COMPUTACAO
description The discrimination of phases that are practically undistinguishable to the optical microscope of reflected light or to the scanning electron microscope (SEM) is one of the classical problems in ore microscopy. With the aim of solving this problem it has been recently used the technique of co-located microscopy that consists in the junction of two microscopy modalities, optical microscopy and scanning electron microscope. The aim of the technique is to provide an image of the multimodal microscopy, becoming possible the identification, in mineral samples, of phases that wouldn t be distinguished by the use of one modality only, overcoming the individual limitations of the two systems. The method of register available so far in literature to the fusion of optical microscopy and scanning electron microscope images is a hard-working procedure and extremely dependent on the operator interaction, once it involves the system calibration with a standard mesh in each routine of images acquisition. Due to this reason the current technique is not practical. This piece of work proposes a methodology in order to automate the process of images register in optical microscopy and scanning electron microscopy in a way to improve and simplify the co-located microscopy technique. The proposed method may be divided in two procedures: acquisition of transformation and register of the images with the use of this transformation. The acquisition of transformation involves, first, the pre-processing of pairs in a way of performing a crude register among the images of each pair. Then, homologous points are achieved in the optical and in SEM images. In order to this, it has been used two methods, the first one was developed based in algorithm SIFT and the second was defined from the sweeping of the highest of coefficient correlation. In the following step it is calculated the transformation. Two different approaches were used: the local weighted mean (LWM) and the weighted least squares with orthogonal polynomials (MQPPO). The LWM receives as entrance what we call pseudo-counterparts, points that are distributed in a regular way in the reference image, and that reveal, in the image to be registered, the relative local dislocation among the images. Those pseudo-counterparts may be obtained by SIFT or by the method of correlation coefficient. On the other side, the MQPPO receives a group of points with natural distribution. The analysis of the images registration obtained employed as a metric the value of correlation among the obtained images. It was noticed that with the use of the proposed variants SIFT-LWM and SIF-Correlation were obtained slightly higher results than the ones from the method with standard mesh and LWM. Thus, the proposal, besides reducing drastically the operator intervention, still enabled more exact results. On the other side, the method based in the transformation provided by the minimum square pondered with orthogonal polynomial showed lower results than to the ones produced by the method that used standard mesh
publishDate 2014
dc.date.available.fl_str_mv 2014-07-24
dc.date.issued.fl_str_mv 2014-05-07
dc.date.accessioned.fl_str_mv 2021-01-05T17:54:16Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv LIMA, Marcos Paulo Galdino de. Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura. 2014. 76 f. Dissertação (Mestrado em Modelagem matemático-estatístico-computacional) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2014.
dc.identifier.uri.fl_str_mv http://www.bdtd.uerj.br/handle/1/7698
identifier_str_mv LIMA, Marcos Paulo Galdino de. Microscopia multimodal prática: registro automático de imagens de microscopia ótica e de microscopia eletrônica de varredura. 2014. 76 f. Dissertação (Mestrado em Modelagem matemático-estatístico-computacional) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2014.
url http://www.bdtd.uerj.br/handle/1/7698
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade do Estado do Rio de Janeiro
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Ciências Computacionais
dc.publisher.initials.fl_str_mv UERJ
dc.publisher.country.fl_str_mv BR
dc.publisher.department.fl_str_mv Centro de Tecnologia e Ciências::Instituto de Matemática e Estatística
publisher.none.fl_str_mv Universidade do Estado do Rio de Janeiro
dc.source.none.fl_str_mv reponame:Biblioteca Digital de Teses e Dissertações da UERJ
instname:Universidade do Estado do Rio de Janeiro (UERJ)
instacron:UERJ
instname_str Universidade do Estado do Rio de Janeiro (UERJ)
instacron_str UERJ
institution UERJ
reponame_str Biblioteca Digital de Teses e Dissertações da UERJ
collection Biblioteca Digital de Teses e Dissertações da UERJ
bitstream.url.fl_str_mv http://www.bdtd.uerj.br/bitstream/1/7698/1/Marcos+Paulo+Galdino_completa.pdf
bitstream.checksum.fl_str_mv 89416a457e2929021d401d9219cc0b88
bitstream.checksumAlgorithm.fl_str_mv MD5
repository.name.fl_str_mv Biblioteca Digital de Teses e Dissertações da UERJ - Universidade do Estado do Rio de Janeiro (UERJ)
repository.mail.fl_str_mv bdtd.suporte@uerj.br
_version_ 1811728630223470592