Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Biblioteca Digital de Teses e Dissertações da UERJ |
Texto Completo: | http://www.bdtd.uerj.br/handle/1/14415 |
Resumo: | Enterococcus has emerged worldwide as one of the most important pathogens related to health care. They have ability to acquire resistance genes, including vancomycin, and have several virulence-associated factors, which contribute greatly to their permanence in the host, facilitating its dissemination, particularly in the hospital environment. The aim of this study was to characterize, by phenotypic and genotypic tests, strains of Enterococcus isolated from infections occurred in patients enrolled in four health-care institutions located in the city of Natal, in the period September 2010 to June 2011. Enterococcus species were characterized by conventional physiological tests and polymerase chain reaction (PCR) multiplex, using specific primers for the characterization at genus and species level. The antimicrobial susceptibility profiles were evaluated by agar diffusion testing. MIC values for vancomycin, teicoplanin and linezolid were determined by E-test, and the vancomycin resistance genotype was analyzed by PCR. Virulence (asa1, cylA, esp, gelE and hyl) were detected by multiplex PCR assays. The genetic polymorphism was evaluated by pulsed field gel electrophoresis (PFGE) using the SmaI. 117 samples were obtained from 116 patients. The results revealed that the species E. faecalis was prevalent (91.4%). The susceptibility testing revealed that the highest resistance rates were associated with tetracycline (58.2%) and high-levels of streptomycin (36.7%). The resistance to vancomycin was detected in one isolate of E. faecium carrying the vanA genotype, corresponding to the first detection of this resistance trait in RN State. This sample was isolated from a case of co-infection with E. faecalis susceptible to vancomycin. Additionally, intermediate resistance to linezolid was found in three isolates of E. faecalis. Among the virulence encoding genes, gelE was the prevalent (83.8%). According to the species, the prevalent genotype among E. faecalis isolates was the concomitant presence of esp and gelE (31.6%). While in E. faecium isolates the presence of esp (28.6%) was prevalent. E. gallinarum isolate harbored both asa1 and cylA. The hyl gene was not detected. Analysis of genetic polymorphism of the strains by PFGE showed a high polyclonality. Given the characteristics of resistance and virulence observed in this study and the emergence of vancomycin-resistance, this study calls the attention to the need for screening, particularly among healthy carriers, and establishing policies to control the spread of these strains in health institutions, even in areas where such features are still uncommon. |
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Merquior, Vania Lucia Carreirahttp://lattes.cnpq.br/0742408281665373Teixeira, Lucia Martinshttp://lattes.cnpq.br/9042913485432336Melo, Maria Celeste Nunes dehttp://lattes.cnpq.br/0580551464788795Marques, Elizabeth de Andradehttp://lattes.cnpq.br/5959485578597640Saliba, Alessandra Mattoshttp://lattes.cnpq.br/6134920105834158Pinto, Tatiana de Castro Abreuhttp://lattes.cnpq.br/7773018491471788http://lattes.cnpq.br/3554422142118332Costa, Mizia Karla de Carvalho Martins2021-01-07T15:16:10Z2014-04-012014-03-29COSTA, Mizia Karla de Carvalho Martins. Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN. 2014. 87 f. Dissertação (Mestrado em Microbiologia Médica Humana) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2014.http://www.bdtd.uerj.br/handle/1/14415Enterococcus has emerged worldwide as one of the most important pathogens related to health care. They have ability to acquire resistance genes, including vancomycin, and have several virulence-associated factors, which contribute greatly to their permanence in the host, facilitating its dissemination, particularly in the hospital environment. The aim of this study was to characterize, by phenotypic and genotypic tests, strains of Enterococcus isolated from infections occurred in patients enrolled in four health-care institutions located in the city of Natal, in the period September 2010 to June 2011. Enterococcus species were characterized by conventional physiological tests and polymerase chain reaction (PCR) multiplex, using specific primers for the characterization at genus and species level. The antimicrobial susceptibility profiles were evaluated by agar diffusion testing. MIC values for vancomycin, teicoplanin and linezolid were determined by E-test, and the vancomycin resistance genotype was analyzed by PCR. Virulence (asa1, cylA, esp, gelE and hyl) were detected by multiplex PCR assays. The genetic polymorphism was evaluated by pulsed field gel electrophoresis (PFGE) using the SmaI. 117 samples were obtained from 116 patients. The results revealed that the species E. faecalis was prevalent (91.4%). The susceptibility testing revealed that the highest resistance rates were associated with tetracycline (58.2%) and high-levels of streptomycin (36.7%). The resistance to vancomycin was detected in one isolate of E. faecium carrying the vanA genotype, corresponding to the first detection of this resistance trait in RN State. This sample was isolated from a case of co-infection with E. faecalis susceptible to vancomycin. Additionally, intermediate resistance to linezolid was found in three isolates of E. faecalis. Among the virulence encoding genes, gelE was the prevalent (83.8%). According to the species, the prevalent genotype among E. faecalis isolates was the concomitant presence of esp and gelE (31.6%). While in E. faecium isolates the presence of esp (28.6%) was prevalent. E. gallinarum isolate harbored both asa1 and cylA. The hyl gene was not detected. Analysis of genetic polymorphism of the strains by PFGE showed a high polyclonality. Given the characteristics of resistance and virulence observed in this study and the emergence of vancomycin-resistance, this study calls the attention to the need for screening, particularly among healthy carriers, and establishing policies to control the spread of these strains in health institutions, even in areas where such features are still uncommon.O gênero Enterococcus tem emergindo como um dos mais importantes patógenos em infecções relacionadas à assistência à saúde no mundo. Estes microrganismos apresentam habilidade de adquirir genes de resistência a vários antimicrobianos, incluíndo à vancomicina, além de possuir diversos fatores associados à virulência, que contribuem sobremaneira para a sua permanência no hospedeiro, facilitando sua disseminação, particularmente, no ambiente hospitalar. Os objetivos deste estudo foram caracterizar, por testes fenotípicos e genotípicos, amostras de Enterococcus isoladas de quadros infecciosos em pacientes atendidos em quatro instituições de saúde localizadas na cidade do Natal, RN, no período de setembro de 2010 a junho de 2011. As espécies de Enterococcus foram caracterizadas por testes fisiológicos convencionais e por reação em cadeia da polimerase (PCR) multiplex, utilizando oligonucleotídeos específicos para caracterização do gênero e espécies. O perfil de susceptibilidade aos antimicrobianos foi avaliado por testes de difusão em ágar. Os valores de concentração inibitória mínima (CIM) para vancomicina, teicoplanina e linezolida foram determinados pelo emprego do teste E; e o genótipo de resistência à vancomicina foi analisado por PCR. Genes associados à virulência (asa1, cylA, esp, gelE e hyl) foram detectados por ensaios de PCR multiplex. O polimorfismo genético das amostras bacterianas foi avaliado por metodologia de eletroforese em campo pulsado (PFGE), com a utilização da enzima SmaI. Foram obtidas 117 amostras, a partir de quadros infecciosos em 116 pacientes. Os resultados revelaram que a espécie E. faecalis foi a prevalente (91,4%). Os testes de susceptibilidade revelaram que as taxas de resistência mais elevadas estiveram associadas à tetraciclina (58,2%) e a níveis elevados de estreptomicina (36,7%). A resistência à vancomicina foi detectada em uma amostra de E. faecium, portadora do genótipo vanA, correspondendo ao primeiro isolamento de amostra com essa característica de resistência no RN. Esta amostra foi isolada em um caso de co-infecção com E. faecalis sensível à vancomicina. Adicionalmente, susceptibilidade intermediária a linezolida foi identificada em três amostras de E. faecalis. Dentre os determinantes de virulência identificados, gelE foi o prevalente (83,8%). De acordo com as espécies E. faecalis o perfil mais detectado foi gelE + esp (31,6%), na espécie E. faecium foi o perfil esp (28,6%) e a única amostra de E. gallinarum apresentou dois determinantes de virulência (asa1 + cylA). O gene hyl não foi identificado em nenhuma das amostras. A análise do polimorfismo genético das amostras por PFGE evidenciou uma elevada policlonalidade. Diante das características de resistência e de virulência observadas e da sinalização da emergência de mecanismos de resistência importantes no Estado do RN, este estudo chama atenção para a necessidade de rastreamento, particularmente entre portadores sadios, e estabelecimento de políticas de controle da disseminação dessas amostras nas instituições de saúde, mesmo em regiões onde tais características ainda sejam pouco frequentes.Submitted by Boris Flegr (boris@uerj.br) on 2021-01-07T15:16:10Z No. of bitstreams: 1 Mizia Karla de Carvalho Martins Costa Dissertacao completa.pdf: 1824355 bytes, checksum: 7f0e774ae3d2d1164380d4f4f2d59c59 (MD5)Made available in DSpace on 2021-01-07T15:16:10Z (GMT). No. of bitstreams: 1 Mizia Karla de Carvalho Martins Costa Dissertacao completa.pdf: 1824355 bytes, checksum: 7f0e774ae3d2d1164380d4f4f2d59c59 (MD5) Previous issue date: 2014-03-29Coordenação de Aperfeiçoamento de Pessoal de Nível Superiorapplication/pdfporUniversidade do Estado do Rio de JaneiroPrograma de Pós-Graduação em MicrobiologiaUERJBRCentro Biomédico::Faculdade de Ciências MédicasEnterococcusVirulenceAntimicrobial resistancePFGEEnterococcusFatores de virulênciaPFGEResistencia aos antimicrobianosCNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA::MICROBIOLOGIA APLICADA::MICROBIOLOGIA MEDICACaracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RNPhenotypic and molecular characterization of strains of Enterococcus isolated in hospitals in the city of Natal / RNinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UERJinstname:Universidade do Estado do Rio de Janeiro (UERJ)instacron:UERJORIGINALMizia Karla de Carvalho Martins Costa Dissertacao completa.pdfapplication/pdf1824355http://www.bdtd.uerj.br/bitstream/1/14415/1/Mizia+Karla+de+Carvalho+Martins+Costa+Dissertacao+completa.pdf7f0e774ae3d2d1164380d4f4f2d59c59MD511/144152024-02-26 19:54:39.78oai:www.bdtd.uerj.br:1/14415Biblioteca Digital de Teses e Dissertaçõeshttp://www.bdtd.uerj.br/PUBhttps://www.bdtd.uerj.br:8443/oai/requestbdtd.suporte@uerj.bropendoar:29032024-02-26T22:54:39Biblioteca Digital de Teses e Dissertações da UERJ - Universidade do Estado do Rio de Janeiro (UERJ)false |
dc.title.por.fl_str_mv |
Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN |
dc.title.alternative.eng.fl_str_mv |
Phenotypic and molecular characterization of strains of Enterococcus isolated in hospitals in the city of Natal / RN |
title |
Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN |
spellingShingle |
Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN Costa, Mizia Karla de Carvalho Martins Enterococcus Virulence Antimicrobial resistance PFGE Enterococcus Fatores de virulência PFGE Resistencia aos antimicrobianos CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA::MICROBIOLOGIA APLICADA::MICROBIOLOGIA MEDICA |
title_short |
Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN |
title_full |
Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN |
title_fullStr |
Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN |
title_full_unstemmed |
Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN |
title_sort |
Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN |
author |
Costa, Mizia Karla de Carvalho Martins |
author_facet |
Costa, Mizia Karla de Carvalho Martins |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Merquior, Vania Lucia Carreira |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/0742408281665373 |
dc.contributor.advisor-co1.fl_str_mv |
Teixeira, Lucia Martins |
dc.contributor.advisor-co1Lattes.fl_str_mv |
http://lattes.cnpq.br/9042913485432336 |
dc.contributor.advisor-co2.fl_str_mv |
Melo, Maria Celeste Nunes de |
dc.contributor.advisor-co2Lattes.fl_str_mv |
http://lattes.cnpq.br/0580551464788795 |
dc.contributor.referee1.fl_str_mv |
Marques, Elizabeth de Andrade |
dc.contributor.referee1Lattes.fl_str_mv |
http://lattes.cnpq.br/5959485578597640 |
dc.contributor.referee2.fl_str_mv |
Saliba, Alessandra Mattos |
dc.contributor.referee2Lattes.fl_str_mv |
http://lattes.cnpq.br/6134920105834158 |
dc.contributor.referee3.fl_str_mv |
Pinto, Tatiana de Castro Abreu |
dc.contributor.referee3Lattes.fl_str_mv |
http://lattes.cnpq.br/7773018491471788 |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/3554422142118332 |
dc.contributor.author.fl_str_mv |
Costa, Mizia Karla de Carvalho Martins |
contributor_str_mv |
Merquior, Vania Lucia Carreira Teixeira, Lucia Martins Melo, Maria Celeste Nunes de Marques, Elizabeth de Andrade Saliba, Alessandra Mattos Pinto, Tatiana de Castro Abreu |
dc.subject.eng.fl_str_mv |
Enterococcus Virulence Antimicrobial resistance PFGE |
topic |
Enterococcus Virulence Antimicrobial resistance PFGE Enterococcus Fatores de virulência PFGE Resistencia aos antimicrobianos CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA::MICROBIOLOGIA APLICADA::MICROBIOLOGIA MEDICA |
dc.subject.por.fl_str_mv |
Enterococcus Fatores de virulência PFGE Resistencia aos antimicrobianos |
dc.subject.cnpq.fl_str_mv |
CNPQ::CIENCIAS BIOLOGICAS::MICROBIOLOGIA::MICROBIOLOGIA APLICADA::MICROBIOLOGIA MEDICA |
description |
Enterococcus has emerged worldwide as one of the most important pathogens related to health care. They have ability to acquire resistance genes, including vancomycin, and have several virulence-associated factors, which contribute greatly to their permanence in the host, facilitating its dissemination, particularly in the hospital environment. The aim of this study was to characterize, by phenotypic and genotypic tests, strains of Enterococcus isolated from infections occurred in patients enrolled in four health-care institutions located in the city of Natal, in the period September 2010 to June 2011. Enterococcus species were characterized by conventional physiological tests and polymerase chain reaction (PCR) multiplex, using specific primers for the characterization at genus and species level. The antimicrobial susceptibility profiles were evaluated by agar diffusion testing. MIC values for vancomycin, teicoplanin and linezolid were determined by E-test, and the vancomycin resistance genotype was analyzed by PCR. Virulence (asa1, cylA, esp, gelE and hyl) were detected by multiplex PCR assays. The genetic polymorphism was evaluated by pulsed field gel electrophoresis (PFGE) using the SmaI. 117 samples were obtained from 116 patients. The results revealed that the species E. faecalis was prevalent (91.4%). The susceptibility testing revealed that the highest resistance rates were associated with tetracycline (58.2%) and high-levels of streptomycin (36.7%). The resistance to vancomycin was detected in one isolate of E. faecium carrying the vanA genotype, corresponding to the first detection of this resistance trait in RN State. This sample was isolated from a case of co-infection with E. faecalis susceptible to vancomycin. Additionally, intermediate resistance to linezolid was found in three isolates of E. faecalis. Among the virulence encoding genes, gelE was the prevalent (83.8%). According to the species, the prevalent genotype among E. faecalis isolates was the concomitant presence of esp and gelE (31.6%). While in E. faecium isolates the presence of esp (28.6%) was prevalent. E. gallinarum isolate harbored both asa1 and cylA. The hyl gene was not detected. Analysis of genetic polymorphism of the strains by PFGE showed a high polyclonality. Given the characteristics of resistance and virulence observed in this study and the emergence of vancomycin-resistance, this study calls the attention to the need for screening, particularly among healthy carriers, and establishing policies to control the spread of these strains in health institutions, even in areas where such features are still uncommon. |
publishDate |
2014 |
dc.date.available.fl_str_mv |
2014-04-01 |
dc.date.issued.fl_str_mv |
2014-03-29 |
dc.date.accessioned.fl_str_mv |
2021-01-07T15:16:10Z |
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info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
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masterThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
COSTA, Mizia Karla de Carvalho Martins. Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN. 2014. 87 f. Dissertação (Mestrado em Microbiologia Médica Humana) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2014. |
dc.identifier.uri.fl_str_mv |
http://www.bdtd.uerj.br/handle/1/14415 |
identifier_str_mv |
COSTA, Mizia Karla de Carvalho Martins. Caracterização fenotípica e molecular de amostras de Enterococcus isoladas em hospitais da cidade do Natal/ RN. 2014. 87 f. Dissertação (Mestrado em Microbiologia Médica Humana) - Universidade do Estado do Rio de Janeiro, Rio de Janeiro, 2014. |
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http://www.bdtd.uerj.br/handle/1/14415 |
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por |
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Universidade do Estado do Rio de Janeiro |
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Programa de Pós-Graduação em Microbiologia |
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UERJ |
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BR |
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Centro Biomédico::Faculdade de Ciências Médicas |
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Universidade do Estado do Rio de Janeiro |
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Biblioteca Digital de Teses e Dissertações da UERJ |
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