Self-affine analysis of protein energy
Autor(a) principal: | |
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Data de Publicação: | 2010 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFBA |
Texto Completo: | http://www.repositorio.ufba.br/ri/handle/ri/5758 |
Resumo: | Acesso restrito: Texto completo. p. 2682-2686 |
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Figueirêdo, P. H.Moret, M. A.Pascutti, P. G.Nogueira Júnior, E.Coutinho, SérgioFigueirêdo, P. H.Moret, M. A.Pascutti, P. G.Nogueira Júnior, E.Coutinho, Sérgio2012-04-26T18:29:26Z20100378-4371http://www.repositorio.ufba.br/ri/handle/ri/5758v. 389, n. 13Acesso restrito: Texto completo. p. 2682-2686We study the time series of the total energy of polypeptides and proteins. These time series were generated by molecular dynamics methods and analyzed by applying detrended fluctuation analysis to estimate the long-range power-law correlation, i.e. to measure scaling exponents . Such exponents were calculated for all systems and their values follow environment conditions, i.e., they are temperature dependent and also, in a continuum medium approach, vary according to the dielectric constants (we simulated D 2 and D 80). The procedure was applied to investigate polyalanines, and other realistic models of proteins (Insect Defensin A and Hemoglobin). The present findings exhibit results that are consistent with previous ones obtained by other methodologies.Submitted by JURANDI DE SOUZA SILVA (jssufba@hotmail.com) on 2012-04-26T18:29:26Z No. of bitstreams: 1 __ac.els-cdn.com_S037843...fc0160eb711cc0487ebaf95578005.pdf: 131037 bytes, checksum: 43431409ba28e039abdb9e3c9672ff11 (MD5)Made available in DSpace on 2012-04-26T18:29:26Z (GMT). No. of bitstreams: 1 __ac.els-cdn.com_S037843...fc0160eb711cc0487ebaf95578005.pdf: 131037 bytes, checksum: 43431409ba28e039abdb9e3c9672ff11 (MD5) Previous issue date: 2010DOI: 10.1016/j.physa.2010.03.021reponame:Repositório Institucional da UFBAinstname:Universidade Federal da Bahia (UFBA)instacron:UFBAProtein packingSelf-affinitySelf-affine analysis of protein energyPhysica A-Statistical Mechanics And Its Applicationsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article10000-01-01enginfo:eu-repo/semantics/openAccessORIGINAL__ac.els-cdn.com_S037843...fc0160eb711cc0487ebaf95578005.pdf__ac.els-cdn.com_S037843...fc0160eb711cc0487ebaf95578005.pdfapplication/pdf131037https://repositorio.ufba.br/bitstream/ri/5758/1/__ac.els-cdn.com_S037843...fc0160eb711cc0487ebaf95578005.pdf43431409ba28e039abdb9e3c9672ff11MD51LICENSElicense.txtlicense.txttext/plain1762https://repositorio.ufba.br/bitstream/ri/5758/2/license.txt1b89a9a0548218172d7c829f87a0eab9MD52TEXT__ac.els-cdn.com_S037843...fc0160eb711cc0487ebaf95578005.pdf.txt__ac.els-cdn.com_S037843...fc0160eb711cc0487ebaf95578005.pdf.txtExtracted texttext/plain19696https://repositorio.ufba.br/bitstream/ri/5758/3/__ac.els-cdn.com_S037843...fc0160eb711cc0487ebaf95578005.pdf.txt0935b8cb6cd9829be4eeae9ab90a4257MD53ri/57582022-07-05 14:03:09.092oai:repositorio.ufba.br:ri/5758VGVybW8gZGUgTGljZW7vv71hLCBu77+9byBleGNsdXNpdm8sIHBhcmEgbyBkZXDvv71zaXRvIG5vIHJlcG9zaXTvv71yaW8gSW5zdGl0dWNpb25hbCBkYSBVRkJBCgogICAgUGVsbyBwcm9jZXNzbyBkZSBzdWJtaXNz77+9byBkZSBkb2N1bWVudG9zLCBvIGF1dG9yIG91IHNldQpyZXByZXNlbnRhbnRlIGxlZ2FsLCBhbyBhY2VpdGFyIGVzc2UgdGVybW8gZGUgbGljZW7vv71hLCBjb25jZWRlIGFvClJlcG9zaXTvv71yaW8gSW5zdGl0dWNpb25hbCBkYSBVbml2ZXJzaWRhZGUgRmVkZXJhbCBkYSBCYWhpYSBvIGRpcmVpdG8KZGUgbWFudGVyIHVtYSBj77+9cGlhIGVtIHNldSByZXBvc2l077+9cmlvIGNvbSBhIGZpbmFsaWRhZGUsIHByaW1laXJhLCAKZGUgcHJlc2VydmHvv73vv71vLiBFc3NlcyB0ZXJtb3MsIG7vv71vIGV4Y2x1c2l2b3MsIG1hbnTvv71tIG9zIGRpcmVpdG9zIGRlIAphdXRvci9jb3B5cmlnaHQsIG1hcyBlbnRlbmRlIG8gZG9jdW1lbnRvIGNvbW8gcGFydGUgZG8gYWNlcnZvIGludGVsZWN0dWFsIGRlc3NhIFVuaXZlcnNpZGFkZS4gCgogICAgUGFyYSBvcyBkb2N1bWVudG9zIHB1YmxpY2Fkb3MgY29tIHJlcGFzc2UgZGUgZGlyZWl0b3MgZGUgZGlzdHJpYnVp77+977+9bywgZXNzZSB0ZXJtbyBkZSBsaWNlbu+/vWEgZW50ZW5kZSBxdWU6IAoKICAgIE1hbnRlbmRvIG9zICBkaXJlaXRvcyBhdXRvcmFpcywgcmVwYXNzYWRvcyBhIHRlcmNlaXJvcywgZW0gY2FzbyAKZGUgcHVibGljYe+/ve+/vWVzLCBvIHJlcG9zaXTvv71yaW8gcG9kZSByZXN0cmluZ2lyIG8gYWNlc3NvIGFvIHRleHRvIAppbnRlZ3JhbCwgbWFzIGxpYmVyYSBhcyBpbmZvcm1h77+977+9ZXMgc29icmUgbyBkb2N1bWVudG8gKE1ldGFkYWRvcyBkZXNjcml0aXZvcykuCgogRGVzdGEgZm9ybWEsIGF0ZW5kZW5kbyBhb3MgYW5zZWlvcyBkZXNzYSB1bml2ZXJzaWRhZGUgCmVtIG1hbnRlciBzdWEgcHJvZHXvv73vv71vIGNpZW5077+9ZmljYSBjb20gYXMgcmVzdHJp77+977+9ZXMgaW1wb3N0YXMgcGVsb3MgCmVkaXRvcmVzIGRlIHBlcmnvv71kaWNvcy4gCgogICAgUGFyYSBhcyBwdWJsaWNh77+977+9ZXMgZW0gaW5pY2lhdGl2YXMgcXVlIHNlZ3VlbSBhIHBvbO+/vXRpY2EgZGUgCkFjZXNzbyBBYmVydG8sIG9zIGRlcO+/vXNpdG9zIGNvbXB1bHPvv71yaW9zIG5lc3NlIHJlcG9zaXTvv71yaW8gbWFudO+/vW0gCm9zIGRpcmVpdG9zIGF1dG9yYWlzLCBtYXMgbWFudO+/vW0gbyBhY2Vzc28gaXJyZXN0cml0byBhbyBtZXRhZGFkb3MgCmUgdGV4dG8gY29tcGxldG8uIEFzc2ltLCBhIGFjZWl0Ye+/ve+/vW8gZGVzc2UgdGVybW8gbu+/vW8gbmVjZXNzaXRhIGRlIApjb25zZW50aW1lbnRvIHBvciBwYXJ0ZSBkZSBhdXRvcmVzL2RldGVudG9yZXMgZG9zIGRpcmVpdG9zLCBwb3IgCmVzdGFyZW0gZW0gaW5pY2lhdGl2YXMgZGUgYWNlc3NvIGFiZXJ0by4KCiAgICBFbSBhbWJvcyBvIGNhc28sIGVzc2UgdGVybW8gZGUgbGljZW7vv71hLCBwb2RlIHNlciBhY2VpdG8gcGVsbyAKYXV0b3IsIGRldGVudG9yZXMgZGUgZGlyZWl0b3MgZS9vdSB0ZXJjZWlyb3MgYW1wYXJhZG9zIHBlbGEgCnVuaXZlcnNpZGFkZS4gRGV2aWRvIGFvcyBkaWZlcmVudGVzIHByb2Nlc3NvcyBwZWxvIHF1YWwgYSBzdWJtaXNz77+9byAKcG9kZSBvY29ycmVyLCBvIHJlcG9zaXTvv71yaW8gcGVybWl0ZSBhIGFjZWl0Ye+/ve+/vW8gZGEgbGljZW7vv71hIHBvciAKdGVyY2Vpcm9zLCBzb21lbnRlIG5vcyBjYXNvcyBkZSBkb2N1bWVudG9zIHByb2R1emlkb3MgcG9yIGludGVncmFudGVzIApkYSBVRkJBIGUgc3VibWV0aWRvcyBwb3IgcGVzc29hcyBhbXBhcmFkYXMgcG9yIGVzdGEgaW5zdGl0dWnvv73vv71vLgo=Repositório InstitucionalPUBhttp://192.188.11.11:8080/oai/requestopendoar:19322022-07-05T17:03:09Repositório Institucional da UFBA - Universidade Federal da Bahia (UFBA)false |
dc.title.pt_BR.fl_str_mv |
Self-affine analysis of protein energy |
dc.title.alternative.pt_BR.fl_str_mv |
Physica A-Statistical Mechanics And Its Applications |
title |
Self-affine analysis of protein energy |
spellingShingle |
Self-affine analysis of protein energy Figueirêdo, P. H. Protein packing Self-affinity |
title_short |
Self-affine analysis of protein energy |
title_full |
Self-affine analysis of protein energy |
title_fullStr |
Self-affine analysis of protein energy |
title_full_unstemmed |
Self-affine analysis of protein energy |
title_sort |
Self-affine analysis of protein energy |
author |
Figueirêdo, P. H. |
author_facet |
Figueirêdo, P. H. Moret, M. A. Pascutti, P. G. Nogueira Júnior, E. Coutinho, Sérgio |
author_role |
author |
author2 |
Moret, M. A. Pascutti, P. G. Nogueira Júnior, E. Coutinho, Sérgio |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Figueirêdo, P. H. Moret, M. A. Pascutti, P. G. Nogueira Júnior, E. Coutinho, Sérgio Figueirêdo, P. H. Moret, M. A. Pascutti, P. G. Nogueira Júnior, E. Coutinho, Sérgio |
dc.subject.por.fl_str_mv |
Protein packing Self-affinity |
topic |
Protein packing Self-affinity |
description |
Acesso restrito: Texto completo. p. 2682-2686 |
publishDate |
2010 |
dc.date.issued.fl_str_mv |
2010 |
dc.date.accessioned.fl_str_mv |
2012-04-26T18:29:26Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://www.repositorio.ufba.br/ri/handle/ri/5758 |
dc.identifier.issn.none.fl_str_mv |
0378-4371 |
dc.identifier.number.pt_BR.fl_str_mv |
v. 389, n. 13 |
identifier_str_mv |
0378-4371 v. 389, n. 13 |
url |
http://www.repositorio.ufba.br/ri/handle/ri/5758 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
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openAccess |
dc.source.pt_BR.fl_str_mv |
DOI: 10.1016/j.physa.2010.03.021 |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UFBA instname:Universidade Federal da Bahia (UFBA) instacron:UFBA |
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