Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves

Detalhes bibliográficos
Autor(a) principal: Bezerra, Walderly Melgaço
Data de Publicação: 2022
Outros Autores: Tavares, Tallita Cruz Lopes, Nogueira, Vanessa Lúcia Rodrigues, Normando, Leonardo Ribeiro Oliveira, Bomfim, Tatiana A., Angelim, Alysson Lira, Melo, Vania Maria Maciel
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da Universidade Federal do Ceará (UFC)
Texto Completo: http://www.repositorio.ufc.br/handle/riufc/64623
Resumo: Microorganisms play important roles in nutrient cycling in mangrove ecosystems and knowledge on the plant/microorganism association is essential to better understand the functioning of this environment. Rhizophora mangle is the dominant tree species within Brazilian mangroves and little information is available on the microbiota associated with this plant species. In this context, the aim of this study was to survey the taxonomic diversity of bacteria in the R. mangle root zones in mangroves within the semi-arid region of Northeast Brazil submitted to different human disturbances, intending to determine the bacterial fingerprint associated with this habitat. The total DNA extracted from sediments of different mangroves was pooled and used for construction of 16S rDNA cloning libraries, which resulted in 663 sequences with an average size of 809 bp. All mangroves were rich in different phyla of the Bacteria domain, with Acidobacteria, Bacteroidetes, Chloroflexi, and Proteobacteria being detected in all locations. Proteobacteria was dominant in all mangroves, and it was mainly represented by Alpha, Delta, and Gammaproteobacteria. The greatest richness was found in the Timonha river mangrove, with 13 phyla, a location considered more preserved compared to other mangroves. The lowest richness was found in Ceará river mangrove, with only seven phyla. This mangrove is threatened by intense urbanization. The results clearly showed that the taxonomic diversity of bacteria from mangroves subjected to intense urbanization have decreased, highlighting the risks of these changes for the functioning of important microbe-mediated processes and related ecosystem services.
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spelling Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangrovesBacteriomas associados aos sedimentos de Rhizophora mangle em manguezais semiáridos do BrasilBrazilian mangrovesBrazil - Semi-aridMicroorganism - Rhizophora mangleMangues - BrasilBrasil - SemiáridoMicroorganismo - Rhizophora mangleMicroorganisms play important roles in nutrient cycling in mangrove ecosystems and knowledge on the plant/microorganism association is essential to better understand the functioning of this environment. Rhizophora mangle is the dominant tree species within Brazilian mangroves and little information is available on the microbiota associated with this plant species. In this context, the aim of this study was to survey the taxonomic diversity of bacteria in the R. mangle root zones in mangroves within the semi-arid region of Northeast Brazil submitted to different human disturbances, intending to determine the bacterial fingerprint associated with this habitat. The total DNA extracted from sediments of different mangroves was pooled and used for construction of 16S rDNA cloning libraries, which resulted in 663 sequences with an average size of 809 bp. All mangroves were rich in different phyla of the Bacteria domain, with Acidobacteria, Bacteroidetes, Chloroflexi, and Proteobacteria being detected in all locations. Proteobacteria was dominant in all mangroves, and it was mainly represented by Alpha, Delta, and Gammaproteobacteria. The greatest richness was found in the Timonha river mangrove, with 13 phyla, a location considered more preserved compared to other mangroves. The lowest richness was found in Ceará river mangrove, with only seven phyla. This mangrove is threatened by intense urbanization. The results clearly showed that the taxonomic diversity of bacteria from mangroves subjected to intense urbanization have decreased, highlighting the risks of these changes for the functioning of important microbe-mediated processes and related ecosystem services.Os microrganismos desempenham papéis importantes na ciclagem de nutrientes em ecossistemas de mangue e o conhecimento da associação planta/microrganismo é essencial para melhor compreender o funcionamento desse ambiente. Rhizophora mangle é a espécie de árvore dominante dentro dos manguezais brasileiros e pouca informação está disponível sobre os micro-organismos associados a essa espécie de planta. Nesse contexto, o objetivo deste estudo foi realizar um levantamento da diversidade taxonômica de bactérias nas zonas radiculares de R. mangle em manguezais da região semiárida do Nordeste do Brasil, submetidos a diferentes distúrbios antrópicos, visando determinar a impressão digital bacteriana associada a esse habitat. O DNA total extraído dos sedimentos de diferentes manguezais foi utilizado para a construção de bibliotecas de clones de rDNA 16S, que resultou em 663 sequências com tamanho médio de 809 pb. Todos os manguezais exibidos eram ricos em diferentes filos de Bacteria, com Acidobacteria, Bacteroidetes, Chloroflexi e Proteobacteria, sendo detectados em todos os locais. Proteobacteria foi dominante em todos os manguezais, tendo sido representado principalmente por Alpha, Delta e Gammaproteobacteria. A maior riqueza foi encontrada no manguezal do rio Timonha, com 13 filos, local considerado mais preservado em comparação com outros manguezais. A menor riqueza foi encontrada no manguezal do rio Ceará, com apenas sete filos. Esse manguezal é ameaçado por intensa urbanização. Os resultados mostraram claramente que a diversidade taxonômica de bactérias de manguezais submetida à intensa urbanização diminuiu, evidenciando os riscos dessas alterações para o funcionamento de importantes processos mediados por micro-organismos e serviços ecossistêmicos relacionadosArquivo de Ciências do Mar2022-03-28T18:07:39Z2022-03-28T18:07:39Z2022info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfBEZERRA, Walderly Melgaço; TAVARES, Tallita Cruz Lopes; NOGUEIRA, Vanessa Lúcia Rodrigues; NORMANDO, Leonardo Ribeiro Oliveira; Leonardo Ribeiro Oliveira; BOMFIM, Tatiana A.; ANGELIM, Alysson Lira; MELO, Vania Maria Maciel. Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves. Arquivo de Ciências do Mar, Fortaleza, v. 55, p. 34-51, 2022. Especial Labomar 60 anos.0374-56862526-7639 (Online)http://www.repositorio.ufc.br/handle/riufc/64623Bezerra, Walderly MelgaçoTavares, Tallita Cruz LopesNogueira, Vanessa Lúcia RodriguesNormando, Leonardo Ribeiro OliveiraBomfim, Tatiana A.Angelim, Alysson LiraMelo, Vania Maria Macielengreponame:Repositório Institucional da Universidade Federal do Ceará (UFC)instname:Universidade Federal do Ceará (UFC)instacron:UFCinfo:eu-repo/semantics/openAccess2022-03-30T15:43:21Zoai:repositorio.ufc.br:riufc/64623Repositório InstitucionalPUBhttp://www.repositorio.ufc.br/ri-oai/requestbu@ufc.br || repositorio@ufc.bropendoar:2022-03-30T15:43:21Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)false
dc.title.none.fl_str_mv Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves
Bacteriomas associados aos sedimentos de Rhizophora mangle em manguezais semiáridos do Brasil
title Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves
spellingShingle Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves
Bezerra, Walderly Melgaço
Brazilian mangroves
Brazil - Semi-arid
Microorganism - Rhizophora mangle
Mangues - Brasil
Brasil - Semiárido
Microorganismo - Rhizophora mangle
title_short Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves
title_full Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves
title_fullStr Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves
title_full_unstemmed Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves
title_sort Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves
author Bezerra, Walderly Melgaço
author_facet Bezerra, Walderly Melgaço
Tavares, Tallita Cruz Lopes
Nogueira, Vanessa Lúcia Rodrigues
Normando, Leonardo Ribeiro Oliveira
Bomfim, Tatiana A.
Angelim, Alysson Lira
Melo, Vania Maria Maciel
author_role author
author2 Tavares, Tallita Cruz Lopes
Nogueira, Vanessa Lúcia Rodrigues
Normando, Leonardo Ribeiro Oliveira
Bomfim, Tatiana A.
Angelim, Alysson Lira
Melo, Vania Maria Maciel
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Bezerra, Walderly Melgaço
Tavares, Tallita Cruz Lopes
Nogueira, Vanessa Lúcia Rodrigues
Normando, Leonardo Ribeiro Oliveira
Bomfim, Tatiana A.
Angelim, Alysson Lira
Melo, Vania Maria Maciel
dc.subject.por.fl_str_mv Brazilian mangroves
Brazil - Semi-arid
Microorganism - Rhizophora mangle
Mangues - Brasil
Brasil - Semiárido
Microorganismo - Rhizophora mangle
topic Brazilian mangroves
Brazil - Semi-arid
Microorganism - Rhizophora mangle
Mangues - Brasil
Brasil - Semiárido
Microorganismo - Rhizophora mangle
description Microorganisms play important roles in nutrient cycling in mangrove ecosystems and knowledge on the plant/microorganism association is essential to better understand the functioning of this environment. Rhizophora mangle is the dominant tree species within Brazilian mangroves and little information is available on the microbiota associated with this plant species. In this context, the aim of this study was to survey the taxonomic diversity of bacteria in the R. mangle root zones in mangroves within the semi-arid region of Northeast Brazil submitted to different human disturbances, intending to determine the bacterial fingerprint associated with this habitat. The total DNA extracted from sediments of different mangroves was pooled and used for construction of 16S rDNA cloning libraries, which resulted in 663 sequences with an average size of 809 bp. All mangroves were rich in different phyla of the Bacteria domain, with Acidobacteria, Bacteroidetes, Chloroflexi, and Proteobacteria being detected in all locations. Proteobacteria was dominant in all mangroves, and it was mainly represented by Alpha, Delta, and Gammaproteobacteria. The greatest richness was found in the Timonha river mangrove, with 13 phyla, a location considered more preserved compared to other mangroves. The lowest richness was found in Ceará river mangrove, with only seven phyla. This mangrove is threatened by intense urbanization. The results clearly showed that the taxonomic diversity of bacteria from mangroves subjected to intense urbanization have decreased, highlighting the risks of these changes for the functioning of important microbe-mediated processes and related ecosystem services.
publishDate 2022
dc.date.none.fl_str_mv 2022-03-28T18:07:39Z
2022-03-28T18:07:39Z
2022
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv BEZERRA, Walderly Melgaço; TAVARES, Tallita Cruz Lopes; NOGUEIRA, Vanessa Lúcia Rodrigues; NORMANDO, Leonardo Ribeiro Oliveira; Leonardo Ribeiro Oliveira; BOMFIM, Tatiana A.; ANGELIM, Alysson Lira; MELO, Vania Maria Maciel. Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves. Arquivo de Ciências do Mar, Fortaleza, v. 55, p. 34-51, 2022. Especial Labomar 60 anos.
0374-5686
2526-7639 (Online)
http://www.repositorio.ufc.br/handle/riufc/64623
identifier_str_mv BEZERRA, Walderly Melgaço; TAVARES, Tallita Cruz Lopes; NOGUEIRA, Vanessa Lúcia Rodrigues; NORMANDO, Leonardo Ribeiro Oliveira; Leonardo Ribeiro Oliveira; BOMFIM, Tatiana A.; ANGELIM, Alysson Lira; MELO, Vania Maria Maciel. Bacteriome associated with Rhizophora mangle sediments within brazil semi-arid mangroves. Arquivo de Ciências do Mar, Fortaleza, v. 55, p. 34-51, 2022. Especial Labomar 60 anos.
0374-5686
2526-7639 (Online)
url http://www.repositorio.ufc.br/handle/riufc/64623
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Arquivo de Ciências do Mar
publisher.none.fl_str_mv Arquivo de Ciências do Mar
dc.source.none.fl_str_mv reponame:Repositório Institucional da Universidade Federal do Ceará (UFC)
instname:Universidade Federal do Ceará (UFC)
instacron:UFC
instname_str Universidade Federal do Ceará (UFC)
instacron_str UFC
institution UFC
reponame_str Repositório Institucional da Universidade Federal do Ceará (UFC)
collection Repositório Institucional da Universidade Federal do Ceará (UFC)
repository.name.fl_str_mv Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)
repository.mail.fl_str_mv bu@ufc.br || repositorio@ufc.br
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