Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Tipo de documento: | Tese |
Idioma: | por |
Título da fonte: | Repositório Institucional da Universidade Federal do Ceará (UFC) |
Texto Completo: | http://www.repositorio.ufc.br/handle/riufc/18736 |
Resumo: | Marine sponges are a rich reserve of natural substances, many of them of immense biotechnological interest. They comprise a promising group in providing bioactive compounds for humanity. Thus, research on new drugs from natural sources suggest that marine sponges have important bioactive compounds ponteciais: pharmacological, antimicrobial; antitumor; antiviral; anti-inflammatory; immunosuppressive; cardiovascular; neurosupressor; muscle relaxant and pollution biomarker. Analysis of expressed proteins is an important approach to determine the function of these molecules in a given organism. This study aimed to bioprospect proteins expressed by the marine sponge Aaptos sp. collected in Icarai de Amontada, Ceará, who may have biotechnological potential. For the realization of this approach were used as strategies the two-dimensional electrophoresis (2-DE) and bioinformatics. The 2-DE is a tool used to separate proteins from different organisms. Knowing the proteins expressed in the study sponge can be established Protein patterns characteristic of the species under study. Based on the above, this study used 2DE to investigate the expressed protein Aaptos sp. In order to make the extraction of total proteins was performed using 400 mg of the marine sponge Aaptos sp. For qualitative and quantitative analysis of proteins was used the method of Bradford and SDS-PAGE, respectively. From the total protein extract was determined the two-dimensional reference map for marine sponge in the study. The adjustment of images of two-dimensional gels, the protein spot detection and evaluation of data to determine apparent molecular weight (MW) and isoelectric point (pI) of the spots was made by the ImageMaster software 7. Expressed proteins were identified using the values of pI and MM spot against a UniProt protein database available on the ExPASy server. The average number of protein spots of replicas of the gels 2DE was 124. The highest abundance proteins was observed in 2DE gels in the pH range of 4 to 6.7 and with MM between 13 to 119.67 kilodalton (kDa). From the 2DE reference gel was identified 122 proteins of which 61, 46 and 15 belong to the Cnidaria taxon deuterostomia and Porifera, respectively. The proteins identified Porifera belong to functional category: ATP binding, structural component of the ribosome, catalytic activity, GTP binding, calcium ion binding and disulfide oxidoreductase activity. The functional category binding of ATP and GTP with more spots. Adicionadamente, was expressed proteins with important molecular functions already hued in the literature but not in Aaptos sp., thus indicating the importance of these marine sponges as a source of protein information that may be studied in the future for their potential use as biotechnological tools in several areas and can be used in studies to elucidate the metabolic pathways and the development of drugs against possible pathologies. |
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Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômicaProtein bioprospecting of the marine sponge Aaptos sp. by proteomic analysisEngenharia de pescaBiotecnologiaEletroforeseEsponja marinhaBiotechnologyElectrophoresisMarine spongeMarine sponges are a rich reserve of natural substances, many of them of immense biotechnological interest. They comprise a promising group in providing bioactive compounds for humanity. Thus, research on new drugs from natural sources suggest that marine sponges have important bioactive compounds ponteciais: pharmacological, antimicrobial; antitumor; antiviral; anti-inflammatory; immunosuppressive; cardiovascular; neurosupressor; muscle relaxant and pollution biomarker. Analysis of expressed proteins is an important approach to determine the function of these molecules in a given organism. This study aimed to bioprospect proteins expressed by the marine sponge Aaptos sp. collected in Icarai de Amontada, Ceará, who may have biotechnological potential. For the realization of this approach were used as strategies the two-dimensional electrophoresis (2-DE) and bioinformatics. The 2-DE is a tool used to separate proteins from different organisms. Knowing the proteins expressed in the study sponge can be established Protein patterns characteristic of the species under study. Based on the above, this study used 2DE to investigate the expressed protein Aaptos sp. In order to make the extraction of total proteins was performed using 400 mg of the marine sponge Aaptos sp. For qualitative and quantitative analysis of proteins was used the method of Bradford and SDS-PAGE, respectively. From the total protein extract was determined the two-dimensional reference map for marine sponge in the study. The adjustment of images of two-dimensional gels, the protein spot detection and evaluation of data to determine apparent molecular weight (MW) and isoelectric point (pI) of the spots was made by the ImageMaster software 7. Expressed proteins were identified using the values of pI and MM spot against a UniProt protein database available on the ExPASy server. The average number of protein spots of replicas of the gels 2DE was 124. The highest abundance proteins was observed in 2DE gels in the pH range of 4 to 6.7 and with MM between 13 to 119.67 kilodalton (kDa). From the 2DE reference gel was identified 122 proteins of which 61, 46 and 15 belong to the Cnidaria taxon deuterostomia and Porifera, respectively. The proteins identified Porifera belong to functional category: ATP binding, structural component of the ribosome, catalytic activity, GTP binding, calcium ion binding and disulfide oxidoreductase activity. The functional category binding of ATP and GTP with more spots. Adicionadamente, was expressed proteins with important molecular functions already hued in the literature but not in Aaptos sp., thus indicating the importance of these marine sponges as a source of protein information that may be studied in the future for their potential use as biotechnological tools in several areas and can be used in studies to elucidate the metabolic pathways and the development of drugs against possible pathologies.As esponjas marinhas constituem uma rica reserva de substâncias naturais, muitas delas de imenso interesse biotecnológico. Elas compreendem um grupo promissor no fornecimento de compostos bioativos para a humanidade. Desta forma, pesquisas de novas drogas de fontes naturais sugerem que as esponjas marinhas possuem importantes compostos bioativos com ponteciais: farmacológico, antimicrobiano; antitumoral; antiviral; antiinflamatório; imunossupresor; cardiovascular; neurosupressor; relaxante muscular bem como biomarcador de poluição. A análise de proteínas expressas é uma abordagem importante para determinar a função dessas moléculas em um determinado organismo. Esse trabalho teve como objetivo bioprospectar proteínas expressas pela esponja marinha Aaptos sp. coletada no Icaraí de Amontada, Ceará, que possam apresentar potencial biotecnológico. Para a realização dessa abordagem, foram utilizadas como estratégias a eletroforese bidimensional (2-DE) e a bioinformática. A 2-DE é uma ferramenta utilizada para separar proteínas de diversos organismos. Conhecendo-se as proteínas expressas na esponja estudada pode-se estabelecer padrões protéicos característicos da espécie em estudo. Com base no exposto, neste estudo foi utilizado 2DE para investigar as proteínas expressas de Aaptos sp. A fim de fazer a extração de proteínas totais foi realizada a partir de 400 mg da esponja marinha Aaptos sp. Para análise quantitativa e qualitativa das proteínas foi utilizado o método de Bradford e SDS-PAGE, respectivamente. A partir das proteínas totais extraídas foi determinado o mapa bidimensional de referência para a esponja marinha em estudo. O ajuste das imagens dos géis bidimensionais, a detecção de spots protéicos e a avaliação dos dados para determinação massa molecular aparente (MM) e ponto isoelétrico (pI) dos spots foi feito pelo programa ImageMaster 7. Proteínas expressas foram identificadas utilizando os valores de pI e MM do spot contra um banco de dados de proteínas UniProt disponível no servidor ExPASy. O número médio de spots protéicos das replicas dos géis 2DE foi de 124. A maior abundância de proteínas foi observada nos géis 2DE na faixa de pH de 4 a 6,7 e com MM entre 13 a 119,67 quilodalton (kDa). A partir do gel 2DE de referencia foi identificado 122 proteínas das quais 61, 46 e 15 pertencem aos táxon cnidária, deuterostomia e porífera, respectivamente. As proteínas identificadas de porífera pertencem a categoria funcional: ligante de ATP, componente estrutural do ribossomo, atividade catalítica, ligante de GTP, ligante de íon de cálcio e atividade dissulfeto oxidoredutase. Sendo a categoria funcional ligante de ATP e de GTP com maior número de spots. Adicionadamente, houve proteínas expressas com importantes funções moleculares já relada na literatura, porém não em Aaptos sp., assim indicando a importância destas esponjas marinhas como fonte de informação proteica que poderão ser estudadas no futuro quanto ao seu potencial uso como ferramentas biotecnológicas em diversas áreas, podendo ser empregadas em estudos que possam elucidar as vias metabólicas bem como o desenvolvimento de fármacos contra possíveis patologias.Nascimento, Kyria Santiago doMartins, Maria Gleiciane De Queiroz2016-07-27T14:15:02Z2016-07-27T14:15:02Z2015info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfMARTINS, Maria Gleiciane De Queiroz. Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica. 2015. 67 f. Tese (Doutorado em Engenharia de Pesca) - Universidade Federal do Ceará, Fortaleza, 2015.http://www.repositorio.ufc.br/handle/riufc/18736porreponame:Repositório Institucional da Universidade Federal do Ceará (UFC)instname:Universidade Federal do Ceará (UFC)instacron:UFCinfo:eu-repo/semantics/openAccess2019-04-11T23:03:41Zoai:repositorio.ufc.br:riufc/18736Repositório InstitucionalPUBhttp://www.repositorio.ufc.br/ri-oai/requestbu@ufc.br || repositorio@ufc.bropendoar:2024-09-11T18:16:37.495789Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)false |
dc.title.none.fl_str_mv |
Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica Protein bioprospecting of the marine sponge Aaptos sp. by proteomic analysis |
title |
Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica |
spellingShingle |
Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica Martins, Maria Gleiciane De Queiroz Engenharia de pesca Biotecnologia Eletroforese Esponja marinha Biotechnology Electrophoresis Marine sponge |
title_short |
Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica |
title_full |
Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica |
title_fullStr |
Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica |
title_full_unstemmed |
Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica |
title_sort |
Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica |
author |
Martins, Maria Gleiciane De Queiroz |
author_facet |
Martins, Maria Gleiciane De Queiroz |
author_role |
author |
dc.contributor.none.fl_str_mv |
Nascimento, Kyria Santiago do |
dc.contributor.author.fl_str_mv |
Martins, Maria Gleiciane De Queiroz |
dc.subject.por.fl_str_mv |
Engenharia de pesca Biotecnologia Eletroforese Esponja marinha Biotechnology Electrophoresis Marine sponge |
topic |
Engenharia de pesca Biotecnologia Eletroforese Esponja marinha Biotechnology Electrophoresis Marine sponge |
description |
Marine sponges are a rich reserve of natural substances, many of them of immense biotechnological interest. They comprise a promising group in providing bioactive compounds for humanity. Thus, research on new drugs from natural sources suggest that marine sponges have important bioactive compounds ponteciais: pharmacological, antimicrobial; antitumor; antiviral; anti-inflammatory; immunosuppressive; cardiovascular; neurosupressor; muscle relaxant and pollution biomarker. Analysis of expressed proteins is an important approach to determine the function of these molecules in a given organism. This study aimed to bioprospect proteins expressed by the marine sponge Aaptos sp. collected in Icarai de Amontada, Ceará, who may have biotechnological potential. For the realization of this approach were used as strategies the two-dimensional electrophoresis (2-DE) and bioinformatics. The 2-DE is a tool used to separate proteins from different organisms. Knowing the proteins expressed in the study sponge can be established Protein patterns characteristic of the species under study. Based on the above, this study used 2DE to investigate the expressed protein Aaptos sp. In order to make the extraction of total proteins was performed using 400 mg of the marine sponge Aaptos sp. For qualitative and quantitative analysis of proteins was used the method of Bradford and SDS-PAGE, respectively. From the total protein extract was determined the two-dimensional reference map for marine sponge in the study. The adjustment of images of two-dimensional gels, the protein spot detection and evaluation of data to determine apparent molecular weight (MW) and isoelectric point (pI) of the spots was made by the ImageMaster software 7. Expressed proteins were identified using the values of pI and MM spot against a UniProt protein database available on the ExPASy server. The average number of protein spots of replicas of the gels 2DE was 124. The highest abundance proteins was observed in 2DE gels in the pH range of 4 to 6.7 and with MM between 13 to 119.67 kilodalton (kDa). From the 2DE reference gel was identified 122 proteins of which 61, 46 and 15 belong to the Cnidaria taxon deuterostomia and Porifera, respectively. The proteins identified Porifera belong to functional category: ATP binding, structural component of the ribosome, catalytic activity, GTP binding, calcium ion binding and disulfide oxidoreductase activity. The functional category binding of ATP and GTP with more spots. Adicionadamente, was expressed proteins with important molecular functions already hued in the literature but not in Aaptos sp., thus indicating the importance of these marine sponges as a source of protein information that may be studied in the future for their potential use as biotechnological tools in several areas and can be used in studies to elucidate the metabolic pathways and the development of drugs against possible pathologies. |
publishDate |
2015 |
dc.date.none.fl_str_mv |
2015 2016-07-27T14:15:02Z 2016-07-27T14:15:02Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/doctoralThesis |
format |
doctoralThesis |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
MARTINS, Maria Gleiciane De Queiroz. Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica. 2015. 67 f. Tese (Doutorado em Engenharia de Pesca) - Universidade Federal do Ceará, Fortaleza, 2015. http://www.repositorio.ufc.br/handle/riufc/18736 |
identifier_str_mv |
MARTINS, Maria Gleiciane De Queiroz. Bioprospecção de proteínas da esponja marinha Aaptos sp. por análise proteômica. 2015. 67 f. Tese (Doutorado em Engenharia de Pesca) - Universidade Federal do Ceará, Fortaleza, 2015. |
url |
http://www.repositorio.ufc.br/handle/riufc/18736 |
dc.language.iso.fl_str_mv |
por |
language |
por |
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info:eu-repo/semantics/openAccess |
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openAccess |
dc.format.none.fl_str_mv |
application/pdf |
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reponame:Repositório Institucional da Universidade Federal do Ceará (UFC) instname:Universidade Federal do Ceará (UFC) instacron:UFC |
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Universidade Federal do Ceará (UFC) |
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UFC |
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UFC |
reponame_str |
Repositório Institucional da Universidade Federal do Ceará (UFC) |
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Repositório Institucional da Universidade Federal do Ceará (UFC) |
repository.name.fl_str_mv |
Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC) |
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bu@ufc.br || repositorio@ufc.br |
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