Ab initio approach of alendronate molecular and three its crystals

Detalhes bibliográficos
Autor(a) principal: JoÃo Rufino Bezerra Neto
Data de Publicação: 2014
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UFC
Texto Completo: http://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=14303
Resumo: Well know therapies for the treatment of osteoporosis, syndrome characterized by increased bone fragility and fracture consist primarily of drugs which prevent bone losses, such as bisphosphonates. Among them, alendronate (PO3)-(OH)-C-((CH2)3 NH3)-(PO3) is one of the chosen treatments in the clinic, IC50 = 50 nM. In this work a study of the molecular alendronate and three of its crystals (sodium alendronate trihydrate and anhydrous and calcium alendronate ) is performed in the scope of Density Functional Theory (DFT). In the first case, the focus is the lowest energy conformations of the molecular alendronate in vacuum, in an aqueous medium in accordance with the model of polarization continuum (PCM), and interacting with three molecules of water of a sodium atom based on the characteristics structural relevadas diffraction X-ray crystal alendrontao sodium trihydrate; their vibrational infrared and Raman spectra are calculated to explain in detail the abundant signatures of the phosphate group in the frequency range 400-1400 cm −1 with the assignments of the most important vibrational modes. In the case of crystals, their structural, electronic and optical properties are obtained in the generalized gradient approximation taking into account the description of the term correlation and exchange Tchatschenko (GGA+TS ); Hirshfeld population analysis in which verified is presented alendronate is that the three crystals is in zwitterionic state. From the calculation of the band structure was obtained GAPs with very close values for the three crystals, however, with the density of states and characteristic for each crystal. The effective masses, dielectric function and theoretical optical absorptions for all crystals are presented.
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spelling info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisAb initio approach of alendronate molecular and three its crystalsAbordagem ab inito do aledronato molecular e trÃs de seus cristais.2014-02-04Pedro de Lima Neto29470293304http://lattes.cnpq.br/2969689646961586Valder Nogueira Freire12105473334http://lattes.cnpq.br/8647922327100953Paula Homem de Mello 27307084805CV: http://lattes.cnpq.br/656056333273104602711106357http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4934576P5JoÃo Rufino Bezerra NetoUniversidade Federal do CearÃPrograma de PÃs-GraduaÃÃo em QuÃmica UFCBROsteoporose Alendronato Raman, Espectroscopia deOsteoporosisAlendronate Raman spectroscopyQUIMICA TEORICAWell know therapies for the treatment of osteoporosis, syndrome characterized by increased bone fragility and fracture consist primarily of drugs which prevent bone losses, such as bisphosphonates. Among them, alendronate (PO3)-(OH)-C-((CH2)3 NH3)-(PO3) is one of the chosen treatments in the clinic, IC50 = 50 nM. In this work a study of the molecular alendronate and three of its crystals (sodium alendronate trihydrate and anhydrous and calcium alendronate ) is performed in the scope of Density Functional Theory (DFT). In the first case, the focus is the lowest energy conformations of the molecular alendronate in vacuum, in an aqueous medium in accordance with the model of polarization continuum (PCM), and interacting with three molecules of water of a sodium atom based on the characteristics structural relevadas diffraction X-ray crystal alendrontao sodium trihydrate; their vibrational infrared and Raman spectra are calculated to explain in detail the abundant signatures of the phosphate group in the frequency range 400-1400 cm −1 with the assignments of the most important vibrational modes. In the case of crystals, their structural, electronic and optical properties are obtained in the generalized gradient approximation taking into account the description of the term correlation and exchange Tchatschenko (GGA+TS ); Hirshfeld population analysis in which verified is presented alendronate is that the three crystals is in zwitterionic state. From the calculation of the band structure was obtained GAPs with very close values for the three crystals, however, with the density of states and characteristic for each crystal. The effective masses, dielectric function and theoretical optical absorptions for all crystals are presented.Terapias estabelecidas para o tratamento da osteosporose, sÃndrome caracterizada por aumento na fragilidade Ãssea e fraturas, consistem primariamente de drogas que previnem a perda Ãssea, como os bisfosfonatos. Entre eles, o alendronato (PO3)-(OH)-C-((CH2)3 NH3)-(PO3) à um dos tratamentos escolhidos na clÃnica, pois possui o IC50=50 nM. Neste trabalho à realizado um estudo do alendronato molecular e de trÃs de seus cristais (alendronato de sÃdio trihidratado e anidro, e alendronato de cÃlcio) utilizando da Teoria do Funcional da Densidade (DFT). No primeiro caso, o foco sÃo os confÃrmeros de menor energia do alendronato molecular no vÃcuo, em meio aquoso de acordo com o modelo contÃnuo polarizÃvel (PCM), e interagindo com trÃs molÃculas de Ãgua e um Ãtomo de sÃdio de acordo com as caracterÃsticas estruturais reveladas por difraÃÃo de raios-X do cristal do alendrontao de sÃdio trihidratado; seus espectros vibracionais no infravermelho e Raman sÃo calculados para explicar com detalhes as abundantes assinaturas do grupo fosfato no intervalo de frequÃncia 400-1400 cm−1, com as atribuiÃÃes dos modos vibracionais mais importantes. No caso dos cristais, sÃo obtidas suas propriedades estruturais, eletrÃnicas e Ãpticas na aproximaÃÃo da gradiente generalizado levando-se em conta a descriÃÃo do termo de correlaÃÃo e troca de Tchatschenko (GGA+TS); à apresentada a anÃlise populacional de Hirshfeld na qual verificou-se que o alendronato nos trÃs cristais encontra-se no estado zwitterionico. A partir do cÃlculo de estrutura de banda, foi obtido GAPs com valores muito prÃximos para os trÃs cristais, porÃm, com densidade de estados bem caracterÃstica para cada cristal. SÃo apresentadas as massas efetivas, funÃÃo dielÃtrica e absorÃÃes Ãpticas teÃricas para todos os cristais.http://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=14303application/pdfinfo:eu-repo/semantics/openAccessporreponame:Biblioteca Digital de Teses e Dissertações da UFCinstname:Universidade Federal do Cearáinstacron:UFC2019-01-21T11:27:41Zmail@mail.com -
dc.title.en.fl_str_mv Ab initio approach of alendronate molecular and three its crystals
dc.title.alternative.pt.fl_str_mv Abordagem ab inito do aledronato molecular e trÃs de seus cristais.
title Ab initio approach of alendronate molecular and three its crystals
spellingShingle Ab initio approach of alendronate molecular and three its crystals
JoÃo Rufino Bezerra Neto
Osteoporose
Alendronato
Raman, Espectroscopia de
Osteoporosis
Alendronate
Raman spectroscopy
QUIMICA TEORICA
title_short Ab initio approach of alendronate molecular and three its crystals
title_full Ab initio approach of alendronate molecular and three its crystals
title_fullStr Ab initio approach of alendronate molecular and three its crystals
title_full_unstemmed Ab initio approach of alendronate molecular and three its crystals
title_sort Ab initio approach of alendronate molecular and three its crystals
author JoÃo Rufino Bezerra Neto
author_facet JoÃo Rufino Bezerra Neto
author_role author
dc.contributor.advisor1.fl_str_mv Pedro de Lima Neto
dc.contributor.advisor1ID.fl_str_mv 29470293304
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/2969689646961586
dc.contributor.referee1.fl_str_mv Valder Nogueira Freire
dc.contributor.referee1ID.fl_str_mv 12105473334
dc.contributor.referee1Lattes.fl_str_mv http://lattes.cnpq.br/8647922327100953
dc.contributor.referee2.fl_str_mv Paula Homem de Mello
dc.contributor.referee2ID.fl_str_mv 27307084805
dc.contributor.referee2Lattes.fl_str_mv CV: http://lattes.cnpq.br/6560563332731046
dc.contributor.authorID.fl_str_mv 02711106357
dc.contributor.authorLattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4934576P5
dc.contributor.author.fl_str_mv JoÃo Rufino Bezerra Neto
contributor_str_mv Pedro de Lima Neto
Valder Nogueira Freire
Paula Homem de Mello
dc.subject.por.fl_str_mv Osteoporose
Alendronato
Raman, Espectroscopia de
topic Osteoporose
Alendronato
Raman, Espectroscopia de
Osteoporosis
Alendronate
Raman spectroscopy
QUIMICA TEORICA
dc.subject.eng.fl_str_mv Osteoporosis
Alendronate
Raman spectroscopy
dc.subject.cnpq.fl_str_mv QUIMICA TEORICA
dc.description.abstract.por.fl_txt_mv Well know therapies for the treatment of osteoporosis, syndrome characterized by increased bone fragility and fracture consist primarily of drugs which prevent bone losses, such as bisphosphonates. Among them, alendronate (PO3)-(OH)-C-((CH2)3 NH3)-(PO3) is one of the chosen treatments in the clinic, IC50 = 50 nM. In this work a study of the molecular alendronate and three of its crystals (sodium alendronate trihydrate and anhydrous and calcium alendronate ) is performed in the scope of Density Functional Theory (DFT). In the first case, the focus is the lowest energy conformations of the molecular alendronate in vacuum, in an aqueous medium in accordance with the model of polarization continuum (PCM), and interacting with three molecules of water of a sodium atom based on the characteristics structural relevadas diffraction X-ray crystal alendrontao sodium trihydrate; their vibrational infrared and Raman spectra are calculated to explain in detail the abundant signatures of the phosphate group in the frequency range 400-1400 cm −1 with the assignments of the most important vibrational modes. In the case of crystals, their structural, electronic and optical properties are obtained in the generalized gradient approximation taking into account the description of the term correlation and exchange Tchatschenko (GGA+TS ); Hirshfeld population analysis in which verified is presented alendronate is that the three crystals is in zwitterionic state. From the calculation of the band structure was obtained GAPs with very close values for the three crystals, however, with the density of states and characteristic for each crystal. The effective masses, dielectric function and theoretical optical absorptions for all crystals are presented.
Terapias estabelecidas para o tratamento da osteosporose, sÃndrome caracterizada por aumento na fragilidade Ãssea e fraturas, consistem primariamente de drogas que previnem a perda Ãssea, como os bisfosfonatos. Entre eles, o alendronato (PO3)-(OH)-C-((CH2)3 NH3)-(PO3) à um dos tratamentos escolhidos na clÃnica, pois possui o IC50=50 nM. Neste trabalho à realizado um estudo do alendronato molecular e de trÃs de seus cristais (alendronato de sÃdio trihidratado e anidro, e alendronato de cÃlcio) utilizando da Teoria do Funcional da Densidade (DFT). No primeiro caso, o foco sÃo os confÃrmeros de menor energia do alendronato molecular no vÃcuo, em meio aquoso de acordo com o modelo contÃnuo polarizÃvel (PCM), e interagindo com trÃs molÃculas de Ãgua e um Ãtomo de sÃdio de acordo com as caracterÃsticas estruturais reveladas por difraÃÃo de raios-X do cristal do alendrontao de sÃdio trihidratado; seus espectros vibracionais no infravermelho e Raman sÃo calculados para explicar com detalhes as abundantes assinaturas do grupo fosfato no intervalo de frequÃncia 400-1400 cm−1, com as atribuiÃÃes dos modos vibracionais mais importantes. No caso dos cristais, sÃo obtidas suas propriedades estruturais, eletrÃnicas e Ãpticas na aproximaÃÃo da gradiente generalizado levando-se em conta a descriÃÃo do termo de correlaÃÃo e troca de Tchatschenko (GGA+TS); à apresentada a anÃlise populacional de Hirshfeld na qual verificou-se que o alendronato nos trÃs cristais encontra-se no estado zwitterionico. A partir do cÃlculo de estrutura de banda, foi obtido GAPs com valores muito prÃximos para os trÃs cristais, porÃm, com densidade de estados bem caracterÃstica para cada cristal. SÃo apresentadas as massas efetivas, funÃÃo dielÃtrica e absorÃÃes Ãpticas teÃricas para todos os cristais.
description Well know therapies for the treatment of osteoporosis, syndrome characterized by increased bone fragility and fracture consist primarily of drugs which prevent bone losses, such as bisphosphonates. Among them, alendronate (PO3)-(OH)-C-((CH2)3 NH3)-(PO3) is one of the chosen treatments in the clinic, IC50 = 50 nM. In this work a study of the molecular alendronate and three of its crystals (sodium alendronate trihydrate and anhydrous and calcium alendronate ) is performed in the scope of Density Functional Theory (DFT). In the first case, the focus is the lowest energy conformations of the molecular alendronate in vacuum, in an aqueous medium in accordance with the model of polarization continuum (PCM), and interacting with three molecules of water of a sodium atom based on the characteristics structural relevadas diffraction X-ray crystal alendrontao sodium trihydrate; their vibrational infrared and Raman spectra are calculated to explain in detail the abundant signatures of the phosphate group in the frequency range 400-1400 cm −1 with the assignments of the most important vibrational modes. In the case of crystals, their structural, electronic and optical properties are obtained in the generalized gradient approximation taking into account the description of the term correlation and exchange Tchatschenko (GGA+TS ); Hirshfeld population analysis in which verified is presented alendronate is that the three crystals is in zwitterionic state. From the calculation of the band structure was obtained GAPs with very close values for the three crystals, however, with the density of states and characteristic for each crystal. The effective masses, dielectric function and theoretical optical absorptions for all crystals are presented.
publishDate 2014
dc.date.issued.fl_str_mv 2014-02-04
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
status_str publishedVersion
format masterThesis
dc.identifier.uri.fl_str_mv http://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=14303
url http://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=14303
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dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal do CearÃ
dc.publisher.program.fl_str_mv Programa de PÃs-GraduaÃÃo em QuÃmica
dc.publisher.initials.fl_str_mv UFC
dc.publisher.country.fl_str_mv BR
publisher.none.fl_str_mv Universidade Federal do CearÃ
dc.source.none.fl_str_mv reponame:Biblioteca Digital de Teses e Dissertações da UFC
instname:Universidade Federal do Ceará
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collection Biblioteca Digital de Teses e Dissertações da UFC
instname_str Universidade Federal do Ceará
instacron_str UFC
institution UFC
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repository.mail.fl_str_mv mail@mail.com
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