Reação de acessos e cultivares de meloeiro a Pseudoperonospora cubensis e identificação de Quantitative Trait Loci de resistência do meloeiro ao míldio

Detalhes bibliográficos
Autor(a) principal: Albuquerque, Leidiane Bezerra
Data de Publicação: 2014
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU)
Texto Completo: https://repositorio.ufersa.edu.br/handle/tede/75
Resumo: Downy mildew, caused by the fungus Pseudoperonospora cubensis, is a major threat to the production of melons in wetlands worldwide. Despite its importance, there are few studies involving the assessment of sources of resistance, as well as the identification of molecular markers that are connected to this feature and that may help breeders in marker-assisted selection (MAS). Given this, the objectives of this work were promote the selection of sources of resistance to downy mildew, from melon accessions, collected from different states in the Northeast region of Brazil and to identify QTLs that co-segregate with the resistance gene of this pathogen, using the F2:3 obtained from parents and Védrantais MR-1, contrasting to the register character. To identify sources of resistance, thirty-six accesses and four commercial cultivars in a randomized block design (RBD) were assessed with three replications and seven plants per plot, which evaluation was made on the field. The evaluation was carried out on 24 days after transplanting the seedlings to the field, when 50% of plants reached the stage of flowering, with the aid of a diagrammatic scale. It was observed that there is variability in melon germplasm for reaction to downy mildew. The accessions A1, A4, A6, A9, A12, A17, A18, A23, A27, A35 and A36 were considered promising for use in breeding programs aiming resistance to P cubensis. All commercial cultivars analyzed were highly susceptible to the pathogen. To identify markers connected the resistance QTLs, MR-1 and Védrantais parents were crossed and subsequently the F2 generation was obtained. It was extracted the DNA for evaluation molecular of the 98 plants obtained with microsatellite primers polymorphic selected from contrasting parents. Of F2 plants were obtained 98 progenies F2:3 that were used for the assessments phenotypic of the severity caused by P. cubensis, it was used the same time assessment described in the previous experiment, the period April-June 2013. The experimental design utilized was lattice simple 10 x 10. The efficiency of lattice was low (100.28%) thus data were analyzed in DBC. Significant genetic differences (P<0.01) between the progenies were identified. The estimated of heritability was considered high (86.75%), indicating successful selection. Were found 23 primers polymorphic, of this sum, thirteen amplified in all the population and were used for analyzes genotypic. Of these, ten markers presented values below level critical specified by FDR test. There was more proportion allele of parent Védrantais for eight loci, while there was more proportion allele the parent MR-1 for two loci. For other loci (three), frequencies allelic did not change. The values coefficients of determination (R2) obtained for the markers were relatively low in population. By regression simple linear, the markers explained the feature in population F2:3 the most were CMBR 139 and CMMS 22-2, being the same identified by regression multiple linear, thus they can also be used in SAM
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spelling Reação de acessos e cultivares de meloeiro a Pseudoperonospora cubensis e identificação de Quantitative Trait Loci de resistência do meloeiro ao míldioReaction of cultivars and accessions of melon Pseudoperonospora cubensis and the identification of Quantitative Trait Loci for resistance to downy mildew of melonCucumis melo L.GermplasmDNA markersResistance geneCucumis melo L.GermoplasmaMarcadores de DNAResistência genéticaCNPQ::CIENCIAS AGRARIAS::AGRONOMIADowny mildew, caused by the fungus Pseudoperonospora cubensis, is a major threat to the production of melons in wetlands worldwide. Despite its importance, there are few studies involving the assessment of sources of resistance, as well as the identification of molecular markers that are connected to this feature and that may help breeders in marker-assisted selection (MAS). Given this, the objectives of this work were promote the selection of sources of resistance to downy mildew, from melon accessions, collected from different states in the Northeast region of Brazil and to identify QTLs that co-segregate with the resistance gene of this pathogen, using the F2:3 obtained from parents and Védrantais MR-1, contrasting to the register character. To identify sources of resistance, thirty-six accesses and four commercial cultivars in a randomized block design (RBD) were assessed with three replications and seven plants per plot, which evaluation was made on the field. The evaluation was carried out on 24 days after transplanting the seedlings to the field, when 50% of plants reached the stage of flowering, with the aid of a diagrammatic scale. It was observed that there is variability in melon germplasm for reaction to downy mildew. The accessions A1, A4, A6, A9, A12, A17, A18, A23, A27, A35 and A36 were considered promising for use in breeding programs aiming resistance to P cubensis. All commercial cultivars analyzed were highly susceptible to the pathogen. To identify markers connected the resistance QTLs, MR-1 and Védrantais parents were crossed and subsequently the F2 generation was obtained. It was extracted the DNA for evaluation molecular of the 98 plants obtained with microsatellite primers polymorphic selected from contrasting parents. Of F2 plants were obtained 98 progenies F2:3 that were used for the assessments phenotypic of the severity caused by P. cubensis, it was used the same time assessment described in the previous experiment, the period April-June 2013. The experimental design utilized was lattice simple 10 x 10. The efficiency of lattice was low (100.28%) thus data were analyzed in DBC. Significant genetic differences (P<0.01) between the progenies were identified. The estimated of heritability was considered high (86.75%), indicating successful selection. Were found 23 primers polymorphic, of this sum, thirteen amplified in all the population and were used for analyzes genotypic. Of these, ten markers presented values below level critical specified by FDR test. There was more proportion allele of parent Védrantais for eight loci, while there was more proportion allele the parent MR-1 for two loci. For other loci (three), frequencies allelic did not change. The values coefficients of determination (R2) obtained for the markers were relatively low in population. By regression simple linear, the markers explained the feature in population F2:3 the most were CMBR 139 and CMMS 22-2, being the same identified by regression multiple linear, thus they can also be used in SAMO míldio, causado pelo fungo Pseudoperonospora cubensis, é uma das principais ameaças à produção do meloeiro em áreas úmidas em todo o mundo. Apesar de sua importância, são poucos os trabalhos envolvendo a avaliação de fontes de resistência, bem como a identificação de marcadores moleculares que estejam ligados a esta característica e que possam auxiliar os melhoristas na seleção assistida por marcadores (SAM). Diante disso, os objetivos deste trabalho foram promover a seleção de fontes de resistência ao míldio, a partir de acessos de meloeiro, coletados em diferentes estados da região Nordeste do Brasil e também identificar QTLs que co-segreguem com genes de resistência a este patógeno, utilizando progênies F2:3 obtidas dos genitores MR-1 e Védrantais, contrastantes para o caráter. Para a identificação de fontes de resistência, foram avaliados trinta e seis acessos e quatro cultivares comerciais em delineamento em blocos casualizados (DBC) com três repetições e sete plantas por parcela, cuja avaliação foi feita em campo. A avaliação se deu aos 24 dias após o transplantio das mudas para o campo, depois que 50% das plantas atingiram o estágio de floração, com o auxílio de uma escala diagramática. Observou-se que existe variabilidade no germoplasma de meloeiro para reação ao míldio. Os acessos A1, A4, A6, A9, A12, A17, A18, A23, A27, A35 e A36 foram considerados promissores para o uso em programas de melhoramento visando resistência a P cubensis. Todas as cultivares comerciais analisadas foram altamente suscetíveis ao patógeno. Para identificação de marcadores ligados a QTLs de resistência, os genitores MR-1 e Védrantais foram cruzados e posteriormente foi obtida a geração F2. Das 98 plantas obtidas foi extraído o DNA para avaliação molecular com primers microssatélites polimórficos selecionados a partir dos genitores contrastantes. Das plantas F2 foram obtidas 98 progênies F2:3 que foram utilizadas para as avaliações fenotípicas quanto a severidade provocada por P. cubensis, seguindo a mesma época de avaliação descrita no experimento anterior no período de abril a junho de 2013. O delineamento utilizado foi o látice simples 10 x 10. A eficiência do látice foi baixa (100,28%), por isso, os dados foram analisados em DBC. Foram identificadas diferenças genéticas significativas (P<0,01) entre as progênies. A estimativa de herdabilidade foi considerada alta (86,75%), indicando sucesso com a seleção. Foram encontrados 23 primers polimórficos. Treze amplificaram em toda a população e foram utilizados para as análises genotípicas. Destes, dez marcadores apresentaram valores abaixo do nível crítico especificado pelo teste FDR. Para oito locos houve maior proporção de alelos do genitor Védrantais, enquanto que para dois locos houve maior proporção de alelos do genitor MR-1. Para os demais locos (três), as frequências alélicas não se alteraram. Os valores dos coeficientes de determinação (R2) obtidos para os marcadores foram relativamente baixos na população. Pela regressão linear simples, os marcadores que mais explicaram a característica na população F2:3 foram CMBR 139 e CMMS 22-2, sendo os mesmos identificados pela regressão linear múltipla, podendo, portanto, serem utilizados na SAMCoordenação de Aperfeiçoamento de Pessoal de Nível SuperiorUniversidade Federal Rural do Semi-ÁridoBRCentro de Ciências Agrárias - CCAUFERSAPrograma de Pós-Graduação em FitotecniaNunes, Glauber Henrique de SousaCPF:82888884453http://lattes.cnpq.br/6199153570472953Antonio, Rafaela PriscilaCPF:01172281416http://lattes.cnpq.br/4570230133800020Ribeiro Júnior, Pedro MartinsCPF:88839818634http://lattes.cnpq.br/0563443107378070Albuquerque, Leidiane Bezerra2016-08-12T19:15:25Z2014-11-182014-02-28info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfapplication/pdfALBUQUERQUE, Leidiane Bezerra. Reaction of cultivars and accessions of melon Pseudoperonospora cubensis and the identification of Quantitative Trait Loci for resistance to downy mildew of melon. 2014. 99 f. Dissertação (Mestrado em Agricultura Tropical) - Universidade Federal Rural do Semi-Árido, Mossoró, 2014.https://repositorio.ufersa.edu.br/handle/tede/75porCC-BY-SAinfo:eu-repo/semantics/openAccessreponame:Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU)instname:Universidade Federal Rural do Semi-Árido (UFERSA)instacron:UFERSA2023-09-13T23:20:59Zoai:repositorio.ufersa.edu.br:tede/75Repositório Institucionalhttps://repositorio.ufersa.edu.br/PUBhttps://repositorio.ufersa.edu.br/server/oai/requestrepositorio@ufersa.edu.br || admrepositorio@ufersa.edu.bropendoar:2023-09-13T23:20:59Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU) - Universidade Federal Rural do Semi-Árido (UFERSA)false
dc.title.none.fl_str_mv Reação de acessos e cultivares de meloeiro a Pseudoperonospora cubensis e identificação de Quantitative Trait Loci de resistência do meloeiro ao míldio
Reaction of cultivars and accessions of melon Pseudoperonospora cubensis and the identification of Quantitative Trait Loci for resistance to downy mildew of melon
title Reação de acessos e cultivares de meloeiro a Pseudoperonospora cubensis e identificação de Quantitative Trait Loci de resistência do meloeiro ao míldio
spellingShingle Reação de acessos e cultivares de meloeiro a Pseudoperonospora cubensis e identificação de Quantitative Trait Loci de resistência do meloeiro ao míldio
Albuquerque, Leidiane Bezerra
Cucumis melo L.
Germplasm
DNA markers
Resistance gene
Cucumis melo L.
Germoplasma
Marcadores de DNA
Resistência genética
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA
title_short Reação de acessos e cultivares de meloeiro a Pseudoperonospora cubensis e identificação de Quantitative Trait Loci de resistência do meloeiro ao míldio
title_full Reação de acessos e cultivares de meloeiro a Pseudoperonospora cubensis e identificação de Quantitative Trait Loci de resistência do meloeiro ao míldio
title_fullStr Reação de acessos e cultivares de meloeiro a Pseudoperonospora cubensis e identificação de Quantitative Trait Loci de resistência do meloeiro ao míldio
title_full_unstemmed Reação de acessos e cultivares de meloeiro a Pseudoperonospora cubensis e identificação de Quantitative Trait Loci de resistência do meloeiro ao míldio
title_sort Reação de acessos e cultivares de meloeiro a Pseudoperonospora cubensis e identificação de Quantitative Trait Loci de resistência do meloeiro ao míldio
author Albuquerque, Leidiane Bezerra
author_facet Albuquerque, Leidiane Bezerra
author_role author
dc.contributor.none.fl_str_mv Nunes, Glauber Henrique de Sousa
CPF:82888884453
http://lattes.cnpq.br/6199153570472953
Antonio, Rafaela Priscila
CPF:01172281416
http://lattes.cnpq.br/4570230133800020
Ribeiro Júnior, Pedro Martins
CPF:88839818634
http://lattes.cnpq.br/0563443107378070
dc.contributor.author.fl_str_mv Albuquerque, Leidiane Bezerra
dc.subject.por.fl_str_mv Cucumis melo L.
Germplasm
DNA markers
Resistance gene
Cucumis melo L.
Germoplasma
Marcadores de DNA
Resistência genética
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA
topic Cucumis melo L.
Germplasm
DNA markers
Resistance gene
Cucumis melo L.
Germoplasma
Marcadores de DNA
Resistência genética
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA
description Downy mildew, caused by the fungus Pseudoperonospora cubensis, is a major threat to the production of melons in wetlands worldwide. Despite its importance, there are few studies involving the assessment of sources of resistance, as well as the identification of molecular markers that are connected to this feature and that may help breeders in marker-assisted selection (MAS). Given this, the objectives of this work were promote the selection of sources of resistance to downy mildew, from melon accessions, collected from different states in the Northeast region of Brazil and to identify QTLs that co-segregate with the resistance gene of this pathogen, using the F2:3 obtained from parents and Védrantais MR-1, contrasting to the register character. To identify sources of resistance, thirty-six accesses and four commercial cultivars in a randomized block design (RBD) were assessed with three replications and seven plants per plot, which evaluation was made on the field. The evaluation was carried out on 24 days after transplanting the seedlings to the field, when 50% of plants reached the stage of flowering, with the aid of a diagrammatic scale. It was observed that there is variability in melon germplasm for reaction to downy mildew. The accessions A1, A4, A6, A9, A12, A17, A18, A23, A27, A35 and A36 were considered promising for use in breeding programs aiming resistance to P cubensis. All commercial cultivars analyzed were highly susceptible to the pathogen. To identify markers connected the resistance QTLs, MR-1 and Védrantais parents were crossed and subsequently the F2 generation was obtained. It was extracted the DNA for evaluation molecular of the 98 plants obtained with microsatellite primers polymorphic selected from contrasting parents. Of F2 plants were obtained 98 progenies F2:3 that were used for the assessments phenotypic of the severity caused by P. cubensis, it was used the same time assessment described in the previous experiment, the period April-June 2013. The experimental design utilized was lattice simple 10 x 10. The efficiency of lattice was low (100.28%) thus data were analyzed in DBC. Significant genetic differences (P<0.01) between the progenies were identified. The estimated of heritability was considered high (86.75%), indicating successful selection. Were found 23 primers polymorphic, of this sum, thirteen amplified in all the population and were used for analyzes genotypic. Of these, ten markers presented values below level critical specified by FDR test. There was more proportion allele of parent Védrantais for eight loci, while there was more proportion allele the parent MR-1 for two loci. For other loci (three), frequencies allelic did not change. The values coefficients of determination (R2) obtained for the markers were relatively low in population. By regression simple linear, the markers explained the feature in population F2:3 the most were CMBR 139 and CMMS 22-2, being the same identified by regression multiple linear, thus they can also be used in SAM
publishDate 2014
dc.date.none.fl_str_mv 2014-11-18
2014-02-28
2016-08-12T19:15:25Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv ALBUQUERQUE, Leidiane Bezerra. Reaction of cultivars and accessions of melon Pseudoperonospora cubensis and the identification of Quantitative Trait Loci for resistance to downy mildew of melon. 2014. 99 f. Dissertação (Mestrado em Agricultura Tropical) - Universidade Federal Rural do Semi-Árido, Mossoró, 2014.
https://repositorio.ufersa.edu.br/handle/tede/75
identifier_str_mv ALBUQUERQUE, Leidiane Bezerra. Reaction of cultivars and accessions of melon Pseudoperonospora cubensis and the identification of Quantitative Trait Loci for resistance to downy mildew of melon. 2014. 99 f. Dissertação (Mestrado em Agricultura Tropical) - Universidade Federal Rural do Semi-Árido, Mossoró, 2014.
url https://repositorio.ufersa.edu.br/handle/tede/75
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv CC-BY-SA
info:eu-repo/semantics/openAccess
rights_invalid_str_mv CC-BY-SA
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Universidade Federal Rural do Semi-Árido
BR
Centro de Ciências Agrárias - CCA
UFERSA
Programa de Pós-Graduação em Fitotecnia
publisher.none.fl_str_mv Universidade Federal Rural do Semi-Árido
BR
Centro de Ciências Agrárias - CCA
UFERSA
Programa de Pós-Graduação em Fitotecnia
dc.source.none.fl_str_mv reponame:Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU)
instname:Universidade Federal Rural do Semi-Árido (UFERSA)
instacron:UFERSA
instname_str Universidade Federal Rural do Semi-Árido (UFERSA)
instacron_str UFERSA
institution UFERSA
reponame_str Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU)
collection Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU)
repository.name.fl_str_mv Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU) - Universidade Federal Rural do Semi-Árido (UFERSA)
repository.mail.fl_str_mv repositorio@ufersa.edu.br || admrepositorio@ufersa.edu.br
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