Caracterização genética e morfoagronômica de germoplasma de Stylosanthes guianensis (Aubl.) Sw.

Detalhes bibliográficos
Autor(a) principal: KARIA, Cláudio Takao
Data de Publicação: 2008
Tipo de documento: Tese
Idioma: por
Título da fonte: Repositório Institucional da UFG
dARK ID: ark:/38995/0013000003ffc
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tde/436
Resumo: Plant genetic resources maintained ex situ, in germplasm banks, are few used in agricultural systems and genetic plant breeding programs. One of the main reasons of this incipient use is the difficulty to obtain information about stored accessions, especially the characterization and preliminary evaluation data. Stylosanthes guianensis is a predominantly self-pollinated and diploid species, which has a great number of this stored accessions and potential for use in agricultural systems. There are approximately one thousand accessions of the S. guianensis in Embrapa‟s germplasm bank. Moreover, only one genotype of this species is now available to commercial growers in Brazil, the cultivar Mineirão. To promote the use of these resources, this study aimed to characterize accessions of S. guianensis, stored in the germplasm bank of Embrapa, using morpho-agronomic traits and microstellites markers (SSR). In morpho-agronomic characterization 535 accessions were evaluated using 23 quantitative traits. The data were analyzed by a principal component analysis (PCA), the Ward's agglomerative hierarchical clustering method, and by univariate analysis of variance, associated to a Tukey test for comparisons among means of the established groups. Thirteen similarity accession groups were established, five of them were considered the ones with the highest potential use in agricultural systems. Regarding these potential groups, it is possible to reduce from 535 to 126 accessions to be thoroughly evaluated. The molecular characterization was made in 437 accessions, using seven microsatellites fluorescent primers, and the detection of the DNA fragments generated by PCR (Polimerase Chain Reaction) was accomplished by a capillary electrophoresis. The seven loci provided 45 alleles (6.43 alleles/locus), of which four were private alleles. Both, principal coordinates analysis and cluster analysis, in this case, by UPGMA agglomerative method, showed a tendency to group accessions together by botanical varieties (canescens, guianensis and pauciflora), except for the microcephala variety. The correlation between the genetic and morpho-agronomic dissimilarities was highly significant, however, it was of low magnitude (r = 0.23, P ≤ 0.0001). This indicates that both evaluations are important and should be performed to achieve a more complete characterization of these accessions and, possibly, of the species. Taking account the germplasm accessions with agronomic potential, selected based on the morpho-agronomic evaluation, several of them presented significant genetic dissimilarities to the Mineirão cultivar. These accessions should be better assessed for agronomic traits, and crossed with this cultivar in breeding programs of the species. The results of this research will allow increasing the efficiency and effectiveness of the germplasm bank activities, helping the choice of genotypes to be tested in agronomic evaluations, and stimulating further researches with these genetic resources.
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spelling DUARTE, João Batistahttp://lattes.cnpq.br/4117228759548186COELHO, Alexandre Siqueira Guedeshttp://lattes.cnpq.br/0840926305216925http://lattes.cnpq.br/7891101563623965KARIA, Cláudio Takao2014-07-29T14:52:05Z2011-02-162008-08-21KARIA, Cláudio Takao. Genetic and morpho-agronomic characterization of Stylosanthes guianensis (Aubl.) Sw. germplasm.. 2008. 140 f. Tese (Doutorado em Ciências Agrárias) - Universidade Federal de Goiás, Goiânia, 2008.http://repositorio.bc.ufg.br/tede/handle/tde/436ark:/38995/0013000003ffcPlant genetic resources maintained ex situ, in germplasm banks, are few used in agricultural systems and genetic plant breeding programs. One of the main reasons of this incipient use is the difficulty to obtain information about stored accessions, especially the characterization and preliminary evaluation data. Stylosanthes guianensis is a predominantly self-pollinated and diploid species, which has a great number of this stored accessions and potential for use in agricultural systems. There are approximately one thousand accessions of the S. guianensis in Embrapa‟s germplasm bank. Moreover, only one genotype of this species is now available to commercial growers in Brazil, the cultivar Mineirão. To promote the use of these resources, this study aimed to characterize accessions of S. guianensis, stored in the germplasm bank of Embrapa, using morpho-agronomic traits and microstellites markers (SSR). In morpho-agronomic characterization 535 accessions were evaluated using 23 quantitative traits. The data were analyzed by a principal component analysis (PCA), the Ward's agglomerative hierarchical clustering method, and by univariate analysis of variance, associated to a Tukey test for comparisons among means of the established groups. Thirteen similarity accession groups were established, five of them were considered the ones with the highest potential use in agricultural systems. Regarding these potential groups, it is possible to reduce from 535 to 126 accessions to be thoroughly evaluated. The molecular characterization was made in 437 accessions, using seven microsatellites fluorescent primers, and the detection of the DNA fragments generated by PCR (Polimerase Chain Reaction) was accomplished by a capillary electrophoresis. The seven loci provided 45 alleles (6.43 alleles/locus), of which four were private alleles. Both, principal coordinates analysis and cluster analysis, in this case, by UPGMA agglomerative method, showed a tendency to group accessions together by botanical varieties (canescens, guianensis and pauciflora), except for the microcephala variety. The correlation between the genetic and morpho-agronomic dissimilarities was highly significant, however, it was of low magnitude (r = 0.23, P ≤ 0.0001). This indicates that both evaluations are important and should be performed to achieve a more complete characterization of these accessions and, possibly, of the species. Taking account the germplasm accessions with agronomic potential, selected based on the morpho-agronomic evaluation, several of them presented significant genetic dissimilarities to the Mineirão cultivar. These accessions should be better assessed for agronomic traits, and crossed with this cultivar in breeding programs of the species. The results of this research will allow increasing the efficiency and effectiveness of the germplasm bank activities, helping the choice of genotypes to be tested in agronomic evaluations, and stimulating further researches with these genetic resources.Os recursos genéticos vegetais armazenados ex situ, em geral, são pouco utilizados nos sistemas de produção e no melhoramento genético de plantas. Um dos principais motivos deste uso incipiente é a dificuldade de se obterem as informações sobre os acessos armazenados, sobretudo os dados de caracterização e avaliação preliminar. A espécie Stylosanthes guianensis, diplóide e preferencialmente autógama, possui grande quantidade desses acessos e potencial de utilização em sistemas agrícolas. Somente no Banco de Germoplasma da Embrapa existe uma coleção com cerca de mil acessos registrados de S. guianensis. Por outro lado, apenas um genótipo dessa espécie é hoje comercializado no Brasil, a cultivar Mineirão. Para promover a utilização desses recursos, o presente trabalho teve como objetivo caracterizar os acessos de S. guianensis, armazenados no Banco de Germoplasma da Embrapa, utilizando-se caracteres morfoagronômicos e marcadores de locos microssatélites (SSR). Na caracterização morfoagronômica, foram avaliados 535 acessos acerca de 23 caracteres quantitativos. Os dados correspondentes foram estatisticamente investigados empregando-se a análise de componentes principais, a análise de agrupamento, pelo método aglomerativo de Ward, e a análise de variância (univariada), associada ao teste de Tukey, para comparar as médias dos grupos identificados. Foram estabelecidos treze grupos de acessos similares, dos quais, cinco foram considerados de maior potencial para a utilização nos sistemas agrícolas. Considerando-se apenas os grupos potenciais, é possível reduzir o número de acessos a serem avaliados mais detalhadamente, de 535 para 126 acessos. Na caracterização genético-molecular foram considerados 437 acessos da coleção, utilizando-se sete primers microssatélites, marcados com fluorescência, e a detecção dos fragmentos de DNA obtidos via PCR (reação da polimerase em cadeia) foi feita por meio da técnica de eletroforese em capilar. Os sete locos produziram 45 alelos (6,43 alelos/loco), dos quais quatro foram alelos privados. Tanto na análise de coordenadas principais, como na análise de agrupamento, neste caso pelo método UPGMA, os acessos demonstraram tendência de se reunirem em grupos, conforme as variedades botânicas da espécie (canescens, guianensis e pauciflora), exceto para a variedade microcephala. A correlação entre as dissimilaridades genéticas e morfoagronômicas foi altamente significativa, porém, de baixa magnitude (r = 0,23; P ≤ 0,0001), indicando que ambas as avaliações são importantes e devem ser realizadas para a melhor caracterização desses acessos e, possivelmente, da espécie. Considerando-se os grupos com potencial agronômico, selecionados na avaliação morfoagronômica, identificaram-se acessos geneticamente bastante dissimilares da cultivar Mineirão, que devem ser mais bem avaliados agronomicamente, para compor possíveis cruzamentos com essa cultivar, em programas de melhoramento da espécie. Assim, os resultados deste trabalho permitirão aumentar a eficiência e a eficácia das atividades no Banco de Germoplasma em estudo, subsidiar a escolha de genótipos a serem testados em avaliações agronômicas, podendo, ainda, estimular outras pesquisas com esses recursos genéticos.Made available in DSpace on 2014-07-29T14:52:05Z (GMT). No. of bitstreams: 1 claudio takao karia.pdf: 2242096 bytes, checksum: 8b502fdb3ff4995409e0345270eaaed3 (MD5) Previous issue date: 2008-08-21application/pdfhttp://repositorio.bc.ufg.br/TEDE/retrieve/2911/claudio%20takao%20karia.pdf.jpgporUniversidade Federal de GoiásDoutorado em AgronomiaUFGBRCiências Agráriasrecursos genéticosleguminosaforrageira tropicalestilosantesmarcador SSRmicrossatélite1. Genética vegetal Recurso de germoplasma 2. Plantas Me- lhoramento genético 3.Melhoramento genético vegetal 4. Germo- plasma vegetal Recursos Utilização 5. Leguminosa 6. Plantas forrageirgenetic resourceslegumetropical foragestyloSSR markermicrosatelliteCNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL::SILVICULTURA::GENETICA E MELHORAMENTO FLORESTALCaracterização genética e morfoagronômica de germoplasma de Stylosanthes guianensis (Aubl.) Sw.Genetic and morpho-agronomic characterization of Stylosanthes guianensis (Aubl.) 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dc.title.por.fl_str_mv Caracterização genética e morfoagronômica de germoplasma de Stylosanthes guianensis (Aubl.) Sw.
dc.title.alternative.eng.fl_str_mv Genetic and morpho-agronomic characterization of Stylosanthes guianensis (Aubl.) Sw. germplasm.
title Caracterização genética e morfoagronômica de germoplasma de Stylosanthes guianensis (Aubl.) Sw.
spellingShingle Caracterização genética e morfoagronômica de germoplasma de Stylosanthes guianensis (Aubl.) Sw.
KARIA, Cláudio Takao
recursos genéticos
leguminosa
forrageira tropical
estilosantes
marcador SSR
microssatélite
1. Genética vegetal Recurso de germoplasma 2. Plantas Me- lhoramento genético 3.Melhoramento genético vegetal 4. Germo- plasma vegetal Recursos Utilização 5. Leguminosa 6. Plantas forrageir
genetic resources
legume
tropical forage
stylo
SSR marker
microsatellite
CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL::SILVICULTURA::GENETICA E MELHORAMENTO FLORESTAL
title_short Caracterização genética e morfoagronômica de germoplasma de Stylosanthes guianensis (Aubl.) Sw.
title_full Caracterização genética e morfoagronômica de germoplasma de Stylosanthes guianensis (Aubl.) Sw.
title_fullStr Caracterização genética e morfoagronômica de germoplasma de Stylosanthes guianensis (Aubl.) Sw.
title_full_unstemmed Caracterização genética e morfoagronômica de germoplasma de Stylosanthes guianensis (Aubl.) Sw.
title_sort Caracterização genética e morfoagronômica de germoplasma de Stylosanthes guianensis (Aubl.) Sw.
author KARIA, Cláudio Takao
author_facet KARIA, Cláudio Takao
author_role author
dc.contributor.advisor1.fl_str_mv DUARTE, João Batista
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/4117228759548186
dc.contributor.advisor-co1.fl_str_mv COELHO, Alexandre Siqueira Guedes
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/0840926305216925
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/7891101563623965
dc.contributor.author.fl_str_mv KARIA, Cláudio Takao
contributor_str_mv DUARTE, João Batista
COELHO, Alexandre Siqueira Guedes
dc.subject.por.fl_str_mv recursos genéticos
leguminosa
forrageira tropical
estilosantes
marcador SSR
microssatélite
1. Genética vegetal Recurso de germoplasma 2. Plantas Me- lhoramento genético 3.Melhoramento genético vegetal 4. Germo- plasma vegetal Recursos Utilização 5. Leguminosa 6. Plantas forrageir
topic recursos genéticos
leguminosa
forrageira tropical
estilosantes
marcador SSR
microssatélite
1. Genética vegetal Recurso de germoplasma 2. Plantas Me- lhoramento genético 3.Melhoramento genético vegetal 4. Germo- plasma vegetal Recursos Utilização 5. Leguminosa 6. Plantas forrageir
genetic resources
legume
tropical forage
stylo
SSR marker
microsatellite
CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL::SILVICULTURA::GENETICA E MELHORAMENTO FLORESTAL
dc.subject.eng.fl_str_mv genetic resources
legume
tropical forage
stylo
SSR marker
microsatellite
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS AGRARIAS::RECURSOS FLORESTAIS E ENGENHARIA FLORESTAL::SILVICULTURA::GENETICA E MELHORAMENTO FLORESTAL
description Plant genetic resources maintained ex situ, in germplasm banks, are few used in agricultural systems and genetic plant breeding programs. One of the main reasons of this incipient use is the difficulty to obtain information about stored accessions, especially the characterization and preliminary evaluation data. Stylosanthes guianensis is a predominantly self-pollinated and diploid species, which has a great number of this stored accessions and potential for use in agricultural systems. There are approximately one thousand accessions of the S. guianensis in Embrapa‟s germplasm bank. Moreover, only one genotype of this species is now available to commercial growers in Brazil, the cultivar Mineirão. To promote the use of these resources, this study aimed to characterize accessions of S. guianensis, stored in the germplasm bank of Embrapa, using morpho-agronomic traits and microstellites markers (SSR). In morpho-agronomic characterization 535 accessions were evaluated using 23 quantitative traits. The data were analyzed by a principal component analysis (PCA), the Ward's agglomerative hierarchical clustering method, and by univariate analysis of variance, associated to a Tukey test for comparisons among means of the established groups. Thirteen similarity accession groups were established, five of them were considered the ones with the highest potential use in agricultural systems. Regarding these potential groups, it is possible to reduce from 535 to 126 accessions to be thoroughly evaluated. The molecular characterization was made in 437 accessions, using seven microsatellites fluorescent primers, and the detection of the DNA fragments generated by PCR (Polimerase Chain Reaction) was accomplished by a capillary electrophoresis. The seven loci provided 45 alleles (6.43 alleles/locus), of which four were private alleles. Both, principal coordinates analysis and cluster analysis, in this case, by UPGMA agglomerative method, showed a tendency to group accessions together by botanical varieties (canescens, guianensis and pauciflora), except for the microcephala variety. The correlation between the genetic and morpho-agronomic dissimilarities was highly significant, however, it was of low magnitude (r = 0.23, P ≤ 0.0001). This indicates that both evaluations are important and should be performed to achieve a more complete characterization of these accessions and, possibly, of the species. Taking account the germplasm accessions with agronomic potential, selected based on the morpho-agronomic evaluation, several of them presented significant genetic dissimilarities to the Mineirão cultivar. These accessions should be better assessed for agronomic traits, and crossed with this cultivar in breeding programs of the species. The results of this research will allow increasing the efficiency and effectiveness of the germplasm bank activities, helping the choice of genotypes to be tested in agronomic evaluations, and stimulating further researches with these genetic resources.
publishDate 2008
dc.date.issued.fl_str_mv 2008-08-21
dc.date.available.fl_str_mv 2011-02-16
dc.date.accessioned.fl_str_mv 2014-07-29T14:52:05Z
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dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
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dc.identifier.citation.fl_str_mv KARIA, Cláudio Takao. Genetic and morpho-agronomic characterization of Stylosanthes guianensis (Aubl.) Sw. germplasm.. 2008. 140 f. Tese (Doutorado em Ciências Agrárias) - Universidade Federal de Goiás, Goiânia, 2008.
dc.identifier.uri.fl_str_mv http://repositorio.bc.ufg.br/tede/handle/tde/436
dc.identifier.dark.fl_str_mv ark:/38995/0013000003ffc
identifier_str_mv KARIA, Cláudio Takao. Genetic and morpho-agronomic characterization of Stylosanthes guianensis (Aubl.) Sw. germplasm.. 2008. 140 f. Tese (Doutorado em Ciências Agrárias) - Universidade Federal de Goiás, Goiânia, 2008.
ark:/38995/0013000003ffc
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dc.publisher.department.fl_str_mv Ciências Agrárias
publisher.none.fl_str_mv Universidade Federal de Goiás
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